RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 NEURL4Q96JN8 1562 aa7.54□□□□□ -1.2
RFC3-202ENST00000434425 POLR1AO95602 1720 aaPredicted RBP7.54□□□□□ -1.2
RFC3-202ENST00000434425 HSP90AB4PQ58FF6 505 aa7.54□□□□□ -1.2
RFC3-202ENST00000434425 DPY19L2Q6NUT2 758 aa7.54□□□□□ -1.2
RFC3-202ENST00000434425 PPARGC1BQ86YN6 1023 aaKnown RBP7.54□□□□□ -1.2
RFC3-202ENST00000434425 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
RFC3-202ENST00000434425 WASHC2CQ9Y4E1 1318 aa7.54□□□□□ -1.2
RFC3-202ENST00000434425 TNRQ92752 1358 aa7.53□□□□□ -1.2
RFC3-202ENST00000434425 CPS1P31327 1500 aa7.53□□□□□ -1.2
RFC3-202ENST00000434425 GALR2O43603 387 aaPredicted RBP7.53□□□□□ -1.2
RFC3-202ENST00000434425 DDX27Q96GQ7 796 aaKnown RBP7.53□□□□□ -1.2
RFC3-202ENST00000434425 CFAP65Q6ZU64 1925 aaKnown RBP7.53□□□□□ -1.2
RFC3-202ENST00000434425 ALKQ9UM73 1620 aa7.53□□□□□ -1.2
RFC3-202ENST00000434425 MTUS2Q5JR59 1369 aa7.53□□□□□ -1.2
RFC3-202ENST00000434425 VWDEQ8N2E2 1590 aa7.52□□□□□ -1.21
RFC3-202ENST00000434425 CAMK2BQ13554 666 aa7.52□□□□□ -1.21
RFC3-202ENST00000434425 RTEL1-TNFRSF6BF6WH68 1400 aa7.52□□□□□ -1.21
RFC3-202ENST00000434425 MIA2Q96PC5 1412 aa7.52□□□□□ -1.21
RFC3-202ENST00000434425 STRCP1A6NGW2 1772 aa7.51□□□□□ -1.21
RFC3-202ENST00000434425 TIE1P35590 1138 aa7.51□□□□□ -1.21
RFC3-202ENST00000434425 ANKRD13AQ8IZ07 590 aa7.51□□□□□ -1.21
RFC3-202ENST00000434425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.51□□□□□ -1.211e-7■■□□□ 13.3
RFC3-202ENST00000434425 RGS17Q9UGC6 210 aaPredicted RBP7.51□□□□□ -1.21
RFC3-202ENST00000434425 PZPP20742 1482 aa7.51□□□□□ -1.21
RFC3-202ENST00000434425 POTEJP0CG39 1038 aa7.5□□□□□ -1.21
RFC3-202ENST00000434425 IRF5Q13568 498 aa7.5□□□□□ -1.21
RFC3-202ENST00000434425 GPATCH11Q8N954 259 aa7.5□□□□□ -1.21
RFC3-202ENST00000434425 SPATA32Q96LK8 384 aa7.5□□□□□ -1.21
RFC3-202ENST00000434425 NPHP4O75161 1426 aaPredicted RBP7.5□□□□□ -1.21
RFC3-202ENST00000434425 MED14O60244 1454 aa7.5□□□□□ -1.21
RFC3-202ENST00000434425 TIAM1Q13009 1591 aa7.5□□□□□ -1.21
RFC3-202ENST00000434425 A6NJR5 290 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 NEFMP07197 916 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 UGGT1Q9NYU2 1555 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 TRIM35Q9UPQ4 493 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 ZC3H4Q9UPT8 1303 aaKnown RBP7.49□□□□□ -1.21
RFC3-202ENST00000434425 KDM5DQ9BY66 1539 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 TRAK2O60296 914 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 RETREG2Q8NC44 543 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 FBXW7Q969H0 707 aa7.49□□□□□ -1.21
RFC3-202ENST00000434425 ARIH1Q9Y4X5 557 aaPredicted RBP7.49□□□□□ -1.21
RFC3-202ENST00000434425 DEPDC5O75140 1603 aa7.48□□□□□ -1.21
RFC3-202ENST00000434425 LRRC7Q96NW7 1537 aa7.48□□□□□ -1.21
RFC3-202ENST00000434425 FAM135AQ9P2D6 1515 aa7.48□□□□□ -1.21
RFC3-202ENST00000434425 NLRP1Q9C000 1473 aa7.48□□□□□ -1.21
RFC3-202ENST00000434425 TSPY4P0CV99 314 aa7.48□□□□□ -1.21
RFC3-202ENST00000434425 TSPY10P0CW01 314 aa7.48□□□□□ -1.21
RFC3-202ENST00000434425 MLLT3P42568 568 aaPredicted RBP7.48□□□□□ -1.21
RFC3-202ENST00000434425 FAM43BQ6ZT52 329 aaPredicted RBP7.48□□□□□ -1.21
RFC3-202ENST00000434425 SECISBP2LQ93073 1101 aaKnown RBP7.48□□□□□ -1.21
RFC3-202ENST00000434425 NAP1L2Q9ULW6 460 aaPredicted RBP7.48□□□□□ -1.21
RFC3-202ENST00000434425 IQGAP1P46940 1657 aa7.47□□□□□ -1.21
RFC3-202ENST00000434425 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
RFC3-202ENST00000434425 LTKP29376 864 aa7.47□□□□□ -1.21
RFC3-202ENST00000434425 FLIIQ13045 1269 aa7.47□□□□□ -1.21
RFC3-202ENST00000434425 PPP1R15BQ5SWA1 713 aa7.47□□□□□ -1.21
RFC3-202ENST00000434425 IPO4Q8TEX9 1081 aaKnown RBP7.47□□□□□ -1.21
RFC3-202ENST00000434425 CCDC141Q6ZP82 1450 aa7.46□□□□□ -1.21
RFC3-202ENST00000434425 TMTC2Q8N394 836 aa7.46□□□□□ -1.22
RFC3-202ENST00000434425 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.22
RFC3-202ENST00000434425 EMILIN3Q9NT22 766 aa7.46□□□□□ -1.22
RFC3-202ENST00000434425 CAMSAP2Q08AD1 1489 aa7.46□□□□□ -1.22
RFC3-202ENST00000434425 BRD1O95696 1058 aa7.45□□□□□ -1.22
RFC3-202ENST00000434425 DSG2Q14126 1118 aa7.45□□□□□ -1.22
RFC3-202ENST00000434425 TXNDC2Q86VQ3 553 aa7.45□□□□□ -1.22
RFC3-202ENST00000434425 PDCD7Q8N8D1 485 aaKnown RBP7.45□□□□□ -1.22
RFC3-202ENST00000434425 EHBP1L1Q8N3D4 1523 aa7.45□□□□□ -1.22
RFC3-202ENST00000434425 NCOA2Q15596 1464 aa7.45□□□□□ -1.22
RFC3-202ENST00000434425 SRCAPQ6ZRS2 3230 aa7.45□□□□□ -1.22
RFC3-202ENST00000434425 XIRP1Q702N8 1843 aaKnown RBP7.45□□□□□ -1.22
RFC3-202ENST00000434425 SMARCA5O60264 1052 aaPredicted RBP7.44□□□□□ -1.22
RFC3-202ENST00000434425 ZMYND10O75800 440 aa7.44□□□□□ -1.22
RFC3-202ENST00000434425 ATN1P54259 1190 aaPredicted RBP7.44□□□□□ -1.22
RFC3-202ENST00000434425 RBM26Q5T8P6 1007 aaKnown RBP7.44□□□□□ -1.22
RFC3-202ENST00000434425 POTEAQ6S8J7 498 aa7.44□□□□□ -1.22
RFC3-202ENST00000434425 NOL8Q76FK4 1167 aaKnown RBP7.44□□□□□ -1.22
RFC3-202ENST00000434425 METRNQ9UJH8 293 aa7.44□□□□□ -1.22
RFC3-202ENST00000434425 ZC3H13Q5T200 1668 aaKnown RBP7.44□□□□□ -1.22
RFC3-202ENST00000434425 PTMAP06454 111 aaKnown RBP7.43□□□□□ -1.22
RFC3-202ENST00000434425 GLIPR1L2Q4G1C9 344 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 MICALL2Q8IY33 904 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 IL27Q8NEV9 243 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 RBM33Q96EV2 1170 aaKnown RBP7.43□□□□□ -1.22
RFC3-202ENST00000434425 KCNG1Q9UIX4 513 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 UBR1Q8IWV7 1749 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 ABCC3O15438 1527 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 ERVK-7P63135 1459 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 RNF17Q9BXT8 1623 aaKnown RBP7.43□□□□□ -1.22
RFC3-202ENST00000434425 DPYSL4O14531 572 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 ONECUT3O60422 494 aaPredicted RBP7.43□□□□□ -1.22
RFC3-202ENST00000434425 SPTY2D1Q68D10 685 aaPredicted RBP7.43□□□□□ -1.22
RFC3-202ENST00000434425 SGSM3Q96HU1 749 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 MYH16Q9H6N6 1097 aa7.43□□□□□ -1.22
RFC3-202ENST00000434425 GPBP1L1Q9HC44 474 aaPredicted RBP7.43□□□□□ -1.22
RFC3-202ENST00000434425 LAS1LQ9Y4W2 734 aaKnown RBP7.43□□□□□ -1.22
RFC3-202ENST00000434425 CEP152O94986 1710 aa7.42□□□□□ -1.22
RFC3-202ENST00000434425 ARHGEF5Q12774 1597 aa7.42□□□□□ -1.22
RFC3-202ENST00000434425 UNCXA6NJT0 531 aa7.42□□□□□ -1.22
RFC3-202ENST00000434425 SCAF11Q99590 1463 aaKnown RBP7.41□□□□□ -1.22
RFC3-202ENST00000434425 SYNMO15061 1565 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms