RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 YEATS2Q9ULM3 1422 aa15.49■□□□□ 0.07
SEMA3F-206ENST00000434342 TMPOP42166 694 aaKnown RBP15.49■□□□□ 0.07
SEMA3F-206ENST00000434342 GZF1Q9H116 711 aaPredicted RBP15.49■□□□□ 0.07
SEMA3F-206ENST00000434342 SETBP1Q9Y6X0 1596 aa15.49■□□□□ 0.07
SEMA3F-206ENST00000434342 CDK19Q9BWU1 502 aa15.49■□□□□ 0.07
SEMA3F-206ENST00000434342 RIPK4P57078 832 aa15.48■□□□□ 0.07
SEMA3F-206ENST00000434342 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
SEMA3F-206ENST00000434342 CCDC27Q2M243 656 aa15.48■□□□□ 0.07
SEMA3F-206ENST00000434342 HDGFL2Q7Z4V5 671 aaPredicted RBP15.48■□□□□ 0.07
SEMA3F-206ENST00000434342 PDZRN3Q9UPQ7 1066 aa15.48■□□□□ 0.07
SEMA3F-206ENST00000434342 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
SEMA3F-206ENST00000434342 WAPLQ7Z5K2 1190 aa15.47■□□□□ 0.07
SEMA3F-206ENST00000434342 PUS7Q96PZ0 661 aaKnown RBP15.47■□□□□ 0.07
SEMA3F-206ENST00000434342 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
SEMA3F-206ENST00000434342 DZIP1LQ8IYY4 767 aaKnown RBP15.47■□□□□ 0.07
SEMA3F-206ENST00000434342 ITPRIPQ8IWB1 547 aa15.47■□□□□ 0.07
SEMA3F-206ENST00000434342 DIAPH1O60610 1272 aaKnown RBP15.46■□□□□ 0.07
SEMA3F-206ENST00000434342 QRICH2Q9H0J4 1663 aa15.46■□□□□ 0.07
SEMA3F-206ENST00000434342 FAM69CQ0P6D2 419 aa15.46■□□□□ 0.07
SEMA3F-206ENST00000434342 NINLQ9Y2I6 1382 aa15.46■□□□□ 0.07
SEMA3F-206ENST00000434342 IFT172Q9UG01 1749 aa15.45■□□□□ 0.06
SEMA3F-206ENST00000434342 MVPQ14764 893 aaKnown RBP15.45■□□□□ 0.06
SEMA3F-206ENST00000434342 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
SEMA3F-206ENST00000434342 SSH1Q8WYL5 1049 aa15.45■□□□□ 0.06
SEMA3F-206ENST00000434342 TULP4Q9NRJ4 1543 aa15.45■□□□□ 0.06
SEMA3F-206ENST00000434342 PRDM10Q9NQV6 1147 aa15.45■□□□□ 0.06
SEMA3F-206ENST00000434342 NSD2O96028 1365 aa15.45■□□□□ 0.06
SEMA3F-206ENST00000434342 TRIM35Q9UPQ4 493 aa15.44■□□□□ 0.06
SEMA3F-206ENST00000434342 GLI2P10070 1586 aa15.44■□□□□ 0.06
SEMA3F-206ENST00000434342 MYO3AQ8NEV4 1616 aa15.44■□□□□ 0.06
SEMA3F-206ENST00000434342 SLKQ9H2G2 1235 aaPredicted RBP15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 UPF2Q9HAU5 1272 aaKnown RBP15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 CLCN1P35523 988 aa15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 PLEKHF1Q96S99 279 aa15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 PPLO60437 1756 aa15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 HMOX1P09601 288 aa15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 TRIM27P14373 513 aa15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
SEMA3F-206ENST00000434342 ATAD2Q6PL18 1390 aa15.42■□□□□ 0.06
SEMA3F-206ENST00000434342 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
SEMA3F-206ENST00000434342 NAP1L2Q9ULW6 460 aaPredicted RBP15.42■□□□□ 0.06
SEMA3F-206ENST00000434342 NEO1Q92859 1461 aa15.41■□□□□ 0.06
SEMA3F-206ENST00000434342 USP19O94966 1318 aa15.41■□□□□ 0.06
SEMA3F-206ENST00000434342 CALD1Q05682 793 aaKnown RBP15.41■□□□□ 0.06
SEMA3F-206ENST00000434342 IQSEC2Q5JU85 1478 aa15.41■□□□□ 0.06
SEMA3F-206ENST00000434342 NEXMIFQ5QGS0 1516 aa15.41■□□□□ 0.06
SEMA3F-206ENST00000434342 ELL2O00472 640 aaPredicted RBP15.4■□□□□ 0.06
SEMA3F-206ENST00000434342 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
SEMA3F-206ENST00000434342 THUMPD2Q9BTF0 503 aaKnown RBP15.4■□□□□ 0.06
SEMA3F-206ENST00000434342 YTHDC2Q9H6S0 1430 aaKnown RBP15.4■□□□□ 0.06
SEMA3F-206ENST00000434342 PDCL3Q9H2J4 239 aa15.4■□□□□ 0.06
SEMA3F-206ENST00000434342 XRCC6P12956 609 aaKnown RBP eCLIP15.39■□□□□ 0.05
SEMA3F-206ENST00000434342 SPRYD3Q8NCJ5 442 aa15.39■□□□□ 0.05
SEMA3F-206ENST00000434342 L1TD1Q5T7N2 865 aaKnown RBP15.39■□□□□ 0.05
SEMA3F-206ENST00000434342 ATF7IPQ6VMQ6 1270 aa15.39■□□□□ 0.05
SEMA3F-206ENST00000434342 BECN1Q14457 450 aa15.39■□□□□ 0.05
SEMA3F-206ENST00000434342 SIGLEC1Q9BZZ2 1709 aa15.38■□□□□ 0.05
SEMA3F-206ENST00000434342 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
SEMA3F-206ENST00000434342 TMEM57Q8N5G2 664 aa15.38■□□□□ 0.05
SEMA3F-206ENST00000434342 CAMSAP1Q5T5Y3 1602 aa15.38■□□□□ 0.05
SEMA3F-206ENST00000434342 CFAP74Q9C0B2 1584 aa15.38■□□□□ 0.05
SEMA3F-206ENST00000434342 FAM13BQ9NYF5 915 aa15.38■□□□□ 0.05
SEMA3F-206ENST00000434342 ARHGAP31Q2M1Z3 1444 aa15.38■□□□□ 0.05
SEMA3F-206ENST00000434342 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
SEMA3F-206ENST00000434342 DDX19BQ9UMR2 479 aa15.37■□□□□ 0.05
SEMA3F-206ENST00000434342 DIP2CQ9Y2E4 1556 aa15.37■□□□□ 0.05
SEMA3F-206ENST00000434342 TXNDC2Q86VQ3 553 aa15.37■□□□□ 0.05
SEMA3F-206ENST00000434342 POLKQ9UBT6 870 aa15.37■□□□□ 0.05
SEMA3F-206ENST00000434342 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
SEMA3F-206ENST00000434342 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
SEMA3F-206ENST00000434342 NCKAP5LQ9HCH0 1330 aa15.36■□□□□ 0.05
SEMA3F-206ENST00000434342 MFAP1P55081 439 aaKnown RBP15.36■□□□□ 0.05
SEMA3F-206ENST00000434342 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
SEMA3F-206ENST00000434342 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
SEMA3F-206ENST00000434342 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
SEMA3F-206ENST00000434342 IPO8O15397 1037 aaKnown RBP15.35■□□□□ 0.05
SEMA3F-206ENST00000434342 FCHSD2O94868 740 aa15.35■□□□□ 0.05
SEMA3F-206ENST00000434342 NME9Q86XW9 330 aa15.35■□□□□ 0.05
SEMA3F-206ENST00000434342 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
SEMA3F-206ENST00000434342 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
SEMA3F-206ENST00000434342 NUTM2FA1L443 756 aa15.34■□□□□ 0.05
SEMA3F-206ENST00000434342 VGLL3A8MV65 326 aa15.34■□□□□ 0.05
SEMA3F-206ENST00000434342 PIK3C2BO00750 1634 aa15.33■□□□□ 0.05
SEMA3F-206ENST00000434342 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.05
SEMA3F-206ENST00000434342 PTPRMP28827 1452 aa15.33■□□□□ 0.04
SEMA3F-206ENST00000434342 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
SEMA3F-206ENST00000434342 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
SEMA3F-206ENST00000434342 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
SEMA3F-206ENST00000434342 LNPKQ9C0E8 428 aa15.32■□□□□ 0.04
SEMA3F-206ENST00000434342 ERBB4Q15303 1308 aa15.32■□□□□ 0.04
SEMA3F-206ENST00000434342 ZC3H13Q5T200 1668 aaKnown RBP15.32■□□□□ 0.04
SEMA3F-206ENST00000434342 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
SEMA3F-206ENST00000434342 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
SEMA3F-206ENST00000434342 TBC1D32Q96NH3 1257 aa15.31■□□□□ 0.04
SEMA3F-206ENST00000434342 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
SEMA3F-206ENST00000434342 KIF16BQ96L93 1317 aa15.3■□□□□ 0.04
SEMA3F-206ENST00000434342 ESPNB1AK53 854 aa15.3■□□□□ 0.04
SEMA3F-206ENST00000434342 SOX12O15370 315 aa15.3■□□□□ 0.04
SEMA3F-206ENST00000434342 TSPYL6Q8N831 410 aa15.3■□□□□ 0.04
SEMA3F-206ENST00000434342 IL16Q14005 1332 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms