RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 NOP58Q9Y2X3 529 aaKnown RBP22.06■■□□□ 1.12
CTSD-204ENST00000433655 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
CTSD-204ENST00000433655 MON2Q7Z3U7 1717 aa22.05■■□□□ 1.12
CTSD-204ENST00000433655 FAM135BQ49AJ0 1406 aa22.04■■□□□ 1.12
CTSD-204ENST00000433655 ESF1Q9H501 851 aaKnown RBP22.04■■□□□ 1.12
CTSD-204ENST00000433655 U2SURPO15042 1029 aaKnown RBP22.04■■□□□ 1.12
CTSD-204ENST00000433655 MAP2P11137 1827 aaKnown RBP22.03■■□□□ 1.12
CTSD-204ENST00000433655 PPIP5K1Q6PFW1 1433 aa22.03■■□□□ 1.12
CTSD-204ENST00000433655 WASLO00401 505 aaPredicted RBP22.03■■□□□ 1.12
CTSD-204ENST00000433655 AKAP12Q02952 1782 aa22.03■■□□□ 1.12
CTSD-204ENST00000433655 LRRC7Q96NW7 1537 aa22.03■■□□□ 1.12
CTSD-204ENST00000433655 PANK1Q8TE04 598 aa22.02■■□□□ 1.12
CTSD-204ENST00000433655 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
CTSD-204ENST00000433655 TMPOP42166 694 aaKnown RBP22.02■■□□□ 1.12
CTSD-204ENST00000433655 TRIM35Q9UPQ4 493 aa22.02■■□□□ 1.12
CTSD-204ENST00000433655 TXNDC2Q86VQ3 553 aa22.01■■□□□ 1.11
CTSD-204ENST00000433655 EDC4Q6P2E9 1401 aaKnown RBP22.01■■□□□ 1.11
CTSD-204ENST00000433655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.01■■□□□ 1.11
CTSD-204ENST00000433655 MYH16Q9H6N6 1097 aa22.01■■□□□ 1.11
CTSD-204ENST00000433655 DIAPH1O60610 1272 aaKnown RBP22■■□□□ 1.11
CTSD-204ENST00000433655 SIRT1Q96EB6 747 aa22■■□□□ 1.11
CTSD-204ENST00000433655 ADAMTS13Q76LX8 1427 aa22■■□□□ 1.11
CTSD-204ENST00000433655 COG6Q9Y2V7 657 aa21.99■■□□□ 1.11
CTSD-204ENST00000433655 ITSN1Q15811 1721 aa21.99■■□□□ 1.11
CTSD-204ENST00000433655 C3P01024 1663 aa21.99■■□□□ 1.11
CTSD-204ENST00000433655 TNNQ9UQP3 1299 aa21.99■■□□□ 1.11
CTSD-204ENST00000433655 FBLN1P23142 703 aa21.98■■□□□ 1.11
CTSD-204ENST00000433655 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
CTSD-204ENST00000433655 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
CTSD-204ENST00000433655 IGHDP01880 384 aa21.97■■□□□ 1.11
CTSD-204ENST00000433655 FRAT1Q92837 279 aaPredicted RBP21.97■■□□□ 1.11
CTSD-204ENST00000433655 RLBP1P12271 317 aa21.97■■□□□ 1.11
CTSD-204ENST00000433655 CLUAP1Q96AJ1 413 aa21.97■■□□□ 1.11
CTSD-204ENST00000433655 MAPK8IP3Q9UPT6 1336 aa21.96■■□□□ 1.11
CTSD-204ENST00000433655 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
CTSD-204ENST00000433655 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.96■■□□□ 1.11
CTSD-204ENST00000433655 NCKAP5LQ9HCH0 1330 aa21.96■■□□□ 1.11
CTSD-204ENST00000433655 NPM2Q86SE8 214 aaKnown RBP21.96■■□□□ 1.11
CTSD-204ENST00000433655 TSR2Q969E8 191 aaKnown RBP21.96■■□□□ 1.11
CTSD-204ENST00000433655 NUDT16Q96DE0 195 aaKnown RBP21.95■■□□□ 1.1
CTSD-204ENST00000433655 ROBO2Q9HCK4 1378 aa21.95■■□□□ 1.1
CTSD-204ENST00000433655 TOPAZ1Q8N9V7 1692 aa21.95■■□□□ 1.1
CTSD-204ENST00000433655 HDGFP51858 240 aaKnown RBP21.94■■□□□ 1.1
CTSD-204ENST00000433655 NME9Q86XW9 330 aa21.94■■□□□ 1.1
CTSD-204ENST00000433655 IL16Q14005 1332 aa21.93■■□□□ 1.1
CTSD-204ENST00000433655 CDK12Q9NYV4 1490 aaPredicted RBP21.93■■□□□ 1.1
CTSD-204ENST00000433655 NRKQ7Z2Y5 1582 aa21.93■■□□□ 1.1
CTSD-204ENST00000433655 PRR36Q9H6K5 1346 aa21.93■■□□□ 1.1
CTSD-204ENST00000433655 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
CTSD-204ENST00000433655 ZRANB1Q9UGI0 708 aa21.92■■□□□ 1.1
CTSD-204ENST00000433655 VIRMAQ69YN4 1812 aaKnown RBP21.92■■□□□ 1.1
CTSD-204ENST00000433655 CT47B1P0C2W7 299 aaPredicted RBP21.92■■□□□ 1.1
CTSD-204ENST00000433655 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
CTSD-204ENST00000433655 RIPK4P57078 832 aa21.91■■□□□ 1.1
CTSD-204ENST00000433655 C8orf34Q49A92 452 aa21.91■■□□□ 1.1
CTSD-204ENST00000433655 AATKQ6ZMQ8 1374 aa21.91■■□□□ 1.1
CTSD-204ENST00000433655 FCHSD2O94868 740 aa21.9■■□□□ 1.1
CTSD-204ENST00000433655 EXOSC9Q06265 439 aaKnown RBP21.9■■□□□ 1.1
CTSD-204ENST00000433655 ZBTB47Q9UFB7 747 aaPredicted RBP21.9■■□□□ 1.1
CTSD-204ENST00000433655 CCDC61Q9Y6R9 512 aa21.9■■□□□ 1.1
CTSD-204ENST00000433655 LTKP29376 864 aa21.9■■□□□ 1.1
CTSD-204ENST00000433655 EMILIN1Q9Y6C2 1016 aa21.9■■□□□ 1.1
CTSD-204ENST00000433655 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
CTSD-204ENST00000433655 PPM1GO15355 546 aaPredicted RBP21.88■■□□□ 1.09
CTSD-204ENST00000433655 RGS3P49796 1198 aa21.88■■□□□ 1.09
CTSD-204ENST00000433655 FAM161AQ3B820 660 aa21.88■■□□□ 1.09
CTSD-204ENST00000433655 PRKAR2BP31323 418 aa21.87■■□□□ 1.09
CTSD-204ENST00000433655 AAMPQ13685 434 aa21.87■■□□□ 1.09
CTSD-204ENST00000433655 PTPRUQ92729 1446 aa21.87■■□□□ 1.09
CTSD-204ENST00000433655 IL13P35225 146 aa21.87■■□□□ 1.09
CTSD-204ENST00000433655 PCDHB15Q9Y5E8 787 aa21.87■■□□□ 1.09
CTSD-204ENST00000433655 CEBPAP49715 358 aaPredicted RBP21.85■■□□□ 1.09
CTSD-204ENST00000433655 SLIT1O75093 1534 aa21.85■■□□□ 1.09
CTSD-204ENST00000433655 FER1L4A9Z1Z3 1794 aa21.85■■□□□ 1.09
CTSD-204ENST00000433655 ARHGAP23Q9P227 1491 aa21.85■■□□□ 1.09
CTSD-204ENST00000433655 ZKSCAN2Q63HK3 967 aa21.84■■□□□ 1.09
CTSD-204ENST00000433655 DLG5Q8TDM6 1919 aa21.84■■□□□ 1.09
CTSD-204ENST00000433655 SSH1Q8WYL5 1049 aa21.84■■□□□ 1.09
CTSD-204ENST00000433655 PHACTR3Q96KR7 559 aa21.84■■□□□ 1.09
CTSD-204ENST00000433655 MVPQ14764 893 aaKnown RBP21.83■■□□□ 1.09
CTSD-204ENST00000433655 HMOX1P09601 288 aa21.82■■□□□ 1.08
CTSD-204ENST00000433655 SMC4Q9NTJ3 1288 aa21.82■■□□□ 1.08
CTSD-204ENST00000433655 NALCNQ8IZF0 1738 aa21.82■■□□□ 1.08
CTSD-204ENST00000433655 COG3Q96JB2 828 aa21.82■■□□□ 1.08
CTSD-204ENST00000433655 NFE2L2Q16236 605 aa21.8■■□□□ 1.08
CTSD-204ENST00000433655 DZIP1LQ8IYY4 767 aaKnown RBP21.8■■□□□ 1.08
CTSD-204ENST00000433655 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
CTSD-204ENST00000433655 ZNF692Q9BU19 519 aaPredicted RBP21.8■■□□□ 1.08
CTSD-204ENST00000433655 TRIM27P14373 513 aa21.8■■□□□ 1.08
CTSD-204ENST00000433655 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
CTSD-204ENST00000433655 OVOS2A0A0J9YW53 1432 aa21.78■■□□□ 1.08
CTSD-204ENST00000433655 OVOS2Q6IE36 1432 aa21.78■■□□□ 1.08
CTSD-204ENST00000433655 SLC26A8Q96RN1 970 aa21.77■■□□□ 1.08
CTSD-204ENST00000433655 PEAK1Q9H792 1746 aa21.77■■□□□ 1.08
CTSD-204ENST00000433655 PLEKHG3A1L390 1219 aa21.77■■□□□ 1.07
CTSD-204ENST00000433655 ACEP12821 1306 aa21.76■■□□□ 1.07
CTSD-204ENST00000433655 TTC21BQ7Z4L5 1316 aa21.76■■□□□ 1.07
CTSD-204ENST00000433655 USP6P35125 1406 aa21.76■■□□□ 1.07
CTSD-204ENST00000433655 ATF7IPQ6VMQ6 1270 aa21.76■■□□□ 1.07
CTSD-204ENST00000433655 FTSJ3Q8IY81 847 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms