RNA–Protein interactions for RNA: ENST00000433272.6

LRIG3-203, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

TSL 1 (best)

Gene LRIG3, Length 3,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-203ENST00000433272 SPHKAPQ2M3C7 1700 aa19.74■□□□□ 0.75
LRIG3-203ENST00000433272 RBM10P98175 930 aaKnown RBP19.74■□□□□ 0.75
LRIG3-203ENST00000433272 RPGRIP1LQ68CZ1 1315 aa19.74■□□□□ 0.75
LRIG3-203ENST00000433272 FYB1O15117 783 aa19.73■□□□□ 0.75
LRIG3-203ENST00000433272 POLR3AO14802 1390 aaPredicted RBP19.73■□□□□ 0.75
LRIG3-203ENST00000433272 ZMYND15Q9H091 742 aa19.73■□□□□ 0.75
LRIG3-203ENST00000433272 SLC52A1Q9NWF4 448 aa19.73■□□□□ 0.75
LRIG3-203ENST00000433272 TRMT2AQ8IZ69 625 aaKnown RBP19.72■□□□□ 0.75
LRIG3-203ENST00000433272 USP19O94966 1318 aa19.72■□□□□ 0.75
LRIG3-203ENST00000433272 KDM5AP29375 1690 aaKnown RBP19.71■□□□□ 0.75
LRIG3-203ENST00000433272 RRS1Q15050 365 aaKnown RBP19.71■□□□□ 0.75
LRIG3-203ENST00000433272 NPC1L1Q9UHC9 1359 aa19.71■□□□□ 0.75
LRIG3-203ENST00000433272 NCKAP5LQ9HCH0 1330 aa19.71■□□□□ 0.75
LRIG3-203ENST00000433272 SYNMO15061 1565 aa19.71■□□□□ 0.75
LRIG3-203ENST00000433272 FAM13BQ9NYF5 915 aa19.71■□□□□ 0.75
LRIG3-203ENST00000433272 ZRANB1Q9UGI0 708 aa19.7■□□□□ 0.74
LRIG3-203ENST00000433272 MVPQ14764 893 aaKnown RBP19.7■□□□□ 0.74
LRIG3-203ENST00000433272 FOXD4L6Q3SYB3 417 aaPredicted RBP19.7■□□□□ 0.74
LRIG3-203ENST00000433272 FOXD4L3Q6VB84 417 aaPredicted RBP19.7■□□□□ 0.74
LRIG3-203ENST00000433272 EMILIN1Q9Y6C2 1016 aa19.7■□□□□ 0.74
LRIG3-203ENST00000433272 A0A1W2PP64 1363 aa19.69■□□□□ 0.74
LRIG3-203ENST00000433272 PTMAP06454 111 aaKnown RBP19.69■□□□□ 0.74
LRIG3-203ENST00000433272 DNTTIP2Q5QJE6 756 aaKnown RBP19.69■□□□□ 0.74
LRIG3-203ENST00000433272 TRIM27P14373 513 aa19.69■□□□□ 0.74
LRIG3-203ENST00000433272 C14orf37Q86TY3 774 aa19.69■□□□□ 0.74
LRIG3-203ENST00000433272 TET3O43151 1660 aa19.69■□□□□ 0.74
LRIG3-203ENST00000433272 TMEM57Q8N5G2 664 aa19.68■□□□□ 0.74
LRIG3-203ENST00000433272 IPO8O15397 1037 aaKnown RBP19.67■□□□□ 0.74
LRIG3-203ENST00000433272 CLASP1Q7Z460 1538 aa19.67■□□□□ 0.74
LRIG3-203ENST00000433272 DCTN1Q14203 1278 aa19.67■□□□□ 0.74
LRIG3-203ENST00000433272 NME9Q86XW9 330 aa19.67■□□□□ 0.74
LRIG3-203ENST00000433272 NOL8Q76FK4 1167 aaKnown RBP19.66■□□□□ 0.74
LRIG3-203ENST00000433272 ANKRD36BQ8N2N9 1353 aa19.66■□□□□ 0.74
LRIG3-203ENST00000433272 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
LRIG3-203ENST00000433272 PLCB2Q00722 1185 aa19.65■□□□□ 0.74
LRIG3-203ENST00000433272 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
LRIG3-203ENST00000433272 INSRP06213 1382 aa19.65■□□□□ 0.74
LRIG3-203ENST00000433272 DDX19BQ9UMR2 479 aa19.65■□□□□ 0.74
LRIG3-203ENST00000433272 MAP3K4Q9Y6R4 1608 aa19.65■□□□□ 0.74
LRIG3-203ENST00000433272 KIF1BO60333 1816 aa19.64■□□□□ 0.74
LRIG3-203ENST00000433272 MPNDQ8N594 471 aa19.64■□□□□ 0.73
LRIG3-203ENST00000433272 TNPO1Q92973 898 aaKnown RBP19.64■□□□□ 0.73
LRIG3-203ENST00000433272 POGZQ7Z3K3 1410 aa19.63■□□□□ 0.73
LRIG3-203ENST00000433272 YEATS2Q9ULM3 1422 aa19.63■□□□□ 0.73
LRIG3-203ENST00000433272 NASPP49321 788 aaPredicted RBP19.63■□□□□ 0.73
LRIG3-203ENST00000433272 CLCN1P35523 988 aa19.63■□□□□ 0.73
LRIG3-203ENST00000433272 LAMC1P11047 1609 aa19.63■□□□□ 0.73
LRIG3-203ENST00000433272 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
LRIG3-203ENST00000433272 MCTP1Q6DN14 999 aa19.63■□□□□ 0.73
LRIG3-203ENST00000433272 COG3Q96JB2 828 aa19.63■□□□□ 0.73
LRIG3-203ENST00000433272 KIAA1211Q6ZU35 1233 aa19.62■□□□□ 0.73
LRIG3-203ENST00000433272 R3HCC1Q9Y3T6 440 aaKnown RBP19.62■□□□□ 0.73
LRIG3-203ENST00000433272 EFCAB6Q5THR3 1501 aa19.62■□□□□ 0.73
LRIG3-203ENST00000433272 IQGAP1P46940 1657 aa19.62■□□□□ 0.73
LRIG3-203ENST00000433272 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
LRIG3-203ENST00000433272 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
LRIG3-203ENST00000433272 ANTXR1Q9H6X2 564 aa19.62■□□□□ 0.73
LRIG3-203ENST00000433272 RNF17Q9BXT8 1623 aaKnown RBP19.61■□□□□ 0.73
LRIG3-203ENST00000433272 PHACTR3Q96KR7 559 aa19.61■□□□□ 0.73
LRIG3-203ENST00000433272 CEP152O94986 1710 aa19.61■□□□□ 0.73
LRIG3-203ENST00000433272 CAVIN1Q6NZI2 390 aaKnown RBP19.6■□□□□ 0.73
LRIG3-203ENST00000433272 MYOM2P54296 1465 aa19.6■□□□□ 0.73
LRIG3-203ENST00000433272 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
LRIG3-203ENST00000433272 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
LRIG3-203ENST00000433272 RNF214Q8ND24 703 aa19.58■□□□□ 0.73
LRIG3-203ENST00000433272 PPRC1Q5VV67 1664 aaKnown RBP19.58■□□□□ 0.73
LRIG3-203ENST00000433272 RRP9O43818 475 aaKnown RBP19.57■□□□□ 0.72
LRIG3-203ENST00000433272 SSFA2P28290 1259 aa19.57■□□□□ 0.72
LRIG3-203ENST00000433272 SLC26A8Q96RN1 970 aa19.57■□□□□ 0.72
LRIG3-203ENST00000433272 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
LRIG3-203ENST00000433272 NUTM2GQ5VZR2 741 aa19.56■□□□□ 0.72
LRIG3-203ENST00000433272 SLC4A10Q6U841 1118 aa19.56■□□□□ 0.72
LRIG3-203ENST00000433272 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
LRIG3-203ENST00000433272 NECTIN2Q92692 538 aa19.56■□□□□ 0.72
LRIG3-203ENST00000433272 LTV1Q96GA3 475 aaPredicted RBP19.56■□□□□ 0.72
LRIG3-203ENST00000433272 POLKQ9UBT6 870 aa19.56■□□□□ 0.72
LRIG3-203ENST00000433272 INO80Q9ULG1 1556 aaPredicted RBP19.56■□□□□ 0.72
LRIG3-203ENST00000433272 KIF16BQ96L93 1317 aa19.54■□□□□ 0.72
LRIG3-203ENST00000433272 GAS2L3Q86XJ1 694 aa19.54■□□□□ 0.72
LRIG3-203ENST00000433272 NUDT16Q96DE0 195 aaKnown RBP19.54■□□□□ 0.72
LRIG3-203ENST00000433272 KIDINS220Q9ULH0 1771 aa19.54■□□□□ 0.72
LRIG3-203ENST00000433272 SULT6B1Q6IMI4 303 aa19.54■□□□□ 0.72
LRIG3-203ENST00000433272 MIS18AQ9NYP9 233 aa19.54■□□□□ 0.72
LRIG3-203ENST00000433272 ABCA9Q8IUA7 1624 aa19.53■□□□□ 0.72
LRIG3-203ENST00000433272 FCHSD2O94868 740 aa19.53■□□□□ 0.72
LRIG3-203ENST00000433272 SKOR2Q2VWA4 1001 aaPredicted RBP19.53■□□□□ 0.72
LRIG3-203ENST00000433272 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
LRIG3-203ENST00000433272 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
LRIG3-203ENST00000433272 NINLQ9Y2I6 1382 aa19.52■□□□□ 0.72
LRIG3-203ENST00000433272 ARAP3Q8WWN8 1544 aa19.52■□□□□ 0.71
LRIG3-203ENST00000433272 MROH2AA6NES4 1674 aa19.51■□□□□ 0.71
LRIG3-203ENST00000433272 KRT24Q2M2I5 525 aa19.51■□□□□ 0.71
LRIG3-203ENST00000433272 YTHDC2Q9H6S0 1430 aaKnown RBP19.51■□□□□ 0.71
LRIG3-203ENST00000433272 CEBPAP49715 358 aaPredicted RBP19.5■□□□□ 0.71
LRIG3-203ENST00000433272 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
LRIG3-203ENST00000433272 CHD1LQ86WJ1 897 aa19.5■□□□□ 0.71
LRIG3-203ENST00000433272 MCM10Q7L590 875 aa19.5■□□□□ 0.71
LRIG3-203ENST00000433272 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
LRIG3-203ENST00000433272 NFE2L2Q16236 605 aa19.49■□□□□ 0.71
LRIG3-203ENST00000433272 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms