RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 PCDHB15Q9Y5E8 787 aa21.42■■□□□ 1.02
CHFR-203ENST00000432561 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
CHFR-203ENST00000432561 TRIM35Q9UPQ4 493 aa21.41■■□□□ 1.02
CHFR-203ENST00000432561 MAPK8IP3Q9UPT6 1336 aa21.4■■□□□ 1.02
CHFR-203ENST00000432561 ANKRD26Q9UPS8 1709 aa21.4■■□□□ 1.02
CHFR-203ENST00000432561 EXOSC9Q06265 439 aaKnown RBP21.4■■□□□ 1.02
CHFR-203ENST00000432561 RIMS2Q9UQ26 1411 aa21.39■■□□□ 1.01
CHFR-203ENST00000432561 RTL5Q5HYW3 569 aaPredicted RBP21.38■■□□□ 1.01
CHFR-203ENST00000432561 DIAPH1O60610 1272 aaKnown RBP21.37■■□□□ 1.01
CHFR-203ENST00000432561 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
CHFR-203ENST00000432561 RIPK4P57078 832 aa21.36■■□□□ 1.01
CHFR-203ENST00000432561 KIF20BQ96Q89 1820 aa21.36■■□□□ 1.01
CHFR-203ENST00000432561 TXNDC2Q86VQ3 553 aa21.35■■□□□ 1.01
CHFR-203ENST00000432561 ZRANB1Q9UGI0 708 aa21.35■■□□□ 1.01
CHFR-203ENST00000432561 DDRGK1Q96HY6 314 aa21.34■■□□□ 1.01
CHFR-203ENST00000432561 SMC4Q9NTJ3 1288 aa21.34■■□□□ 1.01
CHFR-203ENST00000432561 NEFMP07197 916 aa21.34■■□□□ 1.01
CHFR-203ENST00000432561 BCL11AQ9H165 835 aa21.33■■□□□ 1.01
CHFR-203ENST00000432561 SETD1AO15047 1707 aaKnown RBP21.33■■□□□ 1.01
CHFR-203ENST00000432561 SEC24BO95487 1268 aa21.33■■□□□ 1
CHFR-203ENST00000432561 SPATA31D1Q6ZQQ2 1576 aa21.33■■□□□ 1
CHFR-203ENST00000432561 METP08581 1390 aa21.33■■□□□ 1
CHFR-203ENST00000432561 FTSJ3Q8IY81 847 aaKnown RBP21.32■■□□□ 1
CHFR-203ENST00000432561 SSH1Q8WYL5 1049 aa21.32■■□□□ 1
CHFR-203ENST00000432561 AGLP35573 1532 aa21.32■■□□□ 1
CHFR-203ENST00000432561 HMOX1P09601 288 aa21.32■■□□□ 1
CHFR-203ENST00000432561 POLKQ9UBT6 870 aa21.32■■□□□ 1
CHFR-203ENST00000432561 MED14O60244 1454 aa21.32■■□□□ 1
CHFR-203ENST00000432561 MAP2P11137 1827 aaKnown RBP21.31■■□□□ 1
CHFR-203ENST00000432561 ZKSCAN2Q63HK3 967 aa21.31■■□□□ 1
CHFR-203ENST00000432561 EMILIN1Q9Y6C2 1016 aa21.31■■□□□ 1
CHFR-203ENST00000432561 PRKAR2BP31323 418 aa21.3■■□□□ 1
CHFR-203ENST00000432561 NME9Q86XW9 330 aa21.3■■□□□ 1
CHFR-203ENST00000432561 MVPQ14764 893 aaKnown RBP21.3■■□□□ 1
CHFR-203ENST00000432561 REREQ9P2R6 1566 aa21.3■■□□□ 1
CHFR-203ENST00000432561 PNPLA6Q8IY17 1366 aa21.29■■□□□ 1
CHFR-203ENST00000432561 DZIP1LQ8IYY4 767 aaKnown RBP21.29■■□□□ 1
CHFR-203ENST00000432561 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
CHFR-203ENST00000432561 TRIM27P14373 513 aa21.29■■□□□ 1
CHFR-203ENST00000432561 NRXN3Q9Y4C0 1643 aa21.28■■□□□ 1
CHFR-203ENST00000432561 PMFBP1Q8TBY8 1022 aa21.28■■□□□ 1
CHFR-203ENST00000432561 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
CHFR-203ENST00000432561 PDZRN3Q9UPQ7 1066 aa21.28■■□□□ 1
CHFR-203ENST00000432561 VIRMAQ69YN4 1812 aaKnown RBP21.28■■□□□ 1
CHFR-203ENST00000432561 PHACTR3Q96KR7 559 aa21.27■■□□□ 1
CHFR-203ENST00000432561 ESF1Q9H501 851 aaKnown RBP21.27■■□□□ 1
CHFR-203ENST00000432561 DAXXQ9UER7 740 aaPredicted RBP21.27■■□□□ 1
CHFR-203ENST00000432561 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
CHFR-203ENST00000432561 PPIP5K1Q6PFW1 1433 aa21.27■■□□□ 1
CHFR-203ENST00000432561 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
CHFR-203ENST00000432561 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
CHFR-203ENST00000432561 NOB1Q9ULX3 412 aaKnown RBP21.26■□□□□ 0.99
CHFR-203ENST00000432561 RSPH6AQ9H0K4 717 aa21.26■□□□□ 0.99
CHFR-203ENST00000432561 ZMYM3Q14202 1370 aa21.26■□□□□ 0.99
CHFR-203ENST00000432561 USP19O94966 1318 aa21.26■□□□□ 0.99
CHFR-203ENST00000432561 ITPRIPQ8IWB1 547 aa21.25■□□□□ 0.99
CHFR-203ENST00000432561 DLC1Q96QB1 1528 aa21.25■□□□□ 0.99
CHFR-203ENST00000432561 ATP7BP35670 1465 aa21.24■□□□□ 0.99
CHFR-203ENST00000432561 RRS1Q15050 365 aaKnown RBP21.24■□□□□ 0.99
CHFR-203ENST00000432561 NUTM2FA1L443 756 aa21.23■□□□□ 0.99
CHFR-203ENST00000432561 FCHSD2O94868 740 aa21.23■□□□□ 0.99
CHFR-203ENST00000432561 NUDT16Q96DE0 195 aaKnown RBP21.23■□□□□ 0.99
CHFR-203ENST00000432561 ATF7IPQ6VMQ6 1270 aa21.22■□□□□ 0.99
CHFR-203ENST00000432561 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
CHFR-203ENST00000432561 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
CHFR-203ENST00000432561 TMEM57Q8N5G2 664 aa21.21■□□□□ 0.99
CHFR-203ENST00000432561 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
CHFR-203ENST00000432561 CT47B1P0C2W7 299 aaPredicted RBP21.2■□□□□ 0.98
CHFR-203ENST00000432561 CPSF1Q10570 1443 aaKnown RBP21.2■□□□□ 0.98
CHFR-203ENST00000432561 CPS1P31327 1500 aa21.2■□□□□ 0.98
CHFR-203ENST00000432561 IL16Q14005 1332 aa21.2■□□□□ 0.98
CHFR-203ENST00000432561 ELL2O00472 640 aaPredicted RBP21.19■□□□□ 0.98
CHFR-203ENST00000432561 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
CHFR-203ENST00000432561 AAMPQ13685 434 aa21.18■□□□□ 0.98
CHFR-203ENST00000432561 PNNQ9H307 717 aaKnown RBP21.18■□□□□ 0.98
CHFR-203ENST00000432561 EDC4Q6P2E9 1401 aaKnown RBP21.18■□□□□ 0.98
CHFR-203ENST00000432561 PRR36Q9H6K5 1346 aa21.17■□□□□ 0.98
CHFR-203ENST00000432561 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
CHFR-203ENST00000432561 CDC42BPGQ6DT37 1551 aa21.17■□□□□ 0.98
CHFR-203ENST00000432561 IL13P35225 146 aa21.17■□□□□ 0.98
CHFR-203ENST00000432561 TSPYL6Q8N831 410 aa21.16■□□□□ 0.98
CHFR-203ENST00000432561 CCDC61Q9Y6R9 512 aa21.16■□□□□ 0.98
CHFR-203ENST00000432561 NFKBIBQ15653 356 aa21.16■□□□□ 0.98
CHFR-203ENST00000432561 NFE2L2Q16236 605 aa21.15■□□□□ 0.98
CHFR-203ENST00000432561 COG3Q96JB2 828 aa21.15■□□□□ 0.98
CHFR-203ENST00000432561 DDX19BQ9UMR2 479 aa21.15■□□□□ 0.98
CHFR-203ENST00000432561 FAM83GA6ND36 823 aa21.15■□□□□ 0.98
CHFR-203ENST00000432561 TNRQ92752 1358 aa21.14■□□□□ 0.97
CHFR-203ENST00000432561 ROBO2Q9HCK4 1378 aa21.14■□□□□ 0.97
CHFR-203ENST00000432561 CEBPAP49715 358 aaPredicted RBP21.13■□□□□ 0.97
CHFR-203ENST00000432561 DCTN1Q14203 1278 aa21.13■□□□□ 0.97
CHFR-203ENST00000432561 DLG5Q8TDM6 1919 aa21.12■□□□□ 0.97
CHFR-203ENST00000432561 SOX12O15370 315 aa21.11■□□□□ 0.97
CHFR-203ENST00000432561 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
CHFR-203ENST00000432561 KIF16BQ96L93 1317 aa21.11■□□□□ 0.97
CHFR-203ENST00000432561 ZBTB40Q9NUA8 1239 aa21.11■□□□□ 0.97
CHFR-203ENST00000432561 MON2Q7Z3U7 1717 aa21.11■□□□□ 0.97
CHFR-203ENST00000432561 LTKP29376 864 aa21.1■□□□□ 0.97
CHFR-203ENST00000432561 TMEM2Q9UHN6 1383 aa21.1■□□□□ 0.97
CHFR-203ENST00000432561 SLC26A8Q96RN1 970 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms