RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 NPHP4O75161 1426 aaPredicted RBP10.58□□□□□ -0.72
VTI1A-202ENST00000432306 E9PCH4 1651 aa10.58□□□□□ -0.72
VTI1A-202ENST00000432306 MAP3K13O43283 966 aa10.58□□□□□ -0.72
VTI1A-202ENST00000432306 PSEN1P49768 467 aa10.58□□□□□ -0.72
VTI1A-202ENST00000432306 NLRP1Q9C000 1473 aa10.57□□□□□ -0.72
VTI1A-202ENST00000432306 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
VTI1A-202ENST00000432306 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
VTI1A-202ENST00000432306 UGGT1Q9NYU2 1555 aa10.57□□□□□ -0.72
VTI1A-202ENST00000432306 PDE4AP27815 886 aa10.56□□□□□ -0.72
VTI1A-202ENST00000432306 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
VTI1A-202ENST00000432306 RTEL1-TNFRSF6BF6WH68 1400 aa10.56□□□□□ -0.72
VTI1A-202ENST00000432306 STRCP1A6NGW2 1772 aa10.56□□□□□ -0.72
VTI1A-202ENST00000432306 CHIC2Q9UKJ5 165 aa10.55□□□□□ -0.72
VTI1A-202ENST00000432306 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
VTI1A-202ENST00000432306 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
VTI1A-202ENST00000432306 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-202ENST00000432306 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
VTI1A-202ENST00000432306 LRRC7Q96NW7 1537 aa10.54□□□□□ -0.72
VTI1A-202ENST00000432306 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
VTI1A-202ENST00000432306 FBXO31Q5XUX0 539 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-202ENST00000432306 ZRANB1Q9UGI0 708 aa10.54□□□□□ -0.72
VTI1A-202ENST00000432306 PARD3Q8TEW0 1356 aa10.53□□□□□ -0.72
VTI1A-202ENST00000432306 KCNV2Q8TDN2 545 aa10.53□□□□□ -0.72
VTI1A-202ENST00000432306 KIF3BO15066 747 aa10.53□□□□□ -0.72
VTI1A-202ENST00000432306 FLIIQ13045 1269 aa10.53□□□□□ -0.72
VTI1A-202ENST00000432306 TMC1Q8TDI8 760 aa10.53□□□□□ -0.72
VTI1A-202ENST00000432306 PHF12Q96QT6 1004 aa10.53□□□□□ -0.72
VTI1A-202ENST00000432306 RYDENQ9NUL5 291 aaKnown RBP10.53□□□□□ -0.72
VTI1A-202ENST00000432306 RGS17Q9UGC6 210 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-202ENST00000432306 RCAN3Q9UKA8 241 aa10.52□□□□□ -0.73
VTI1A-202ENST00000432306 BLMP54132 1417 aaPredicted RBP10.52□□□□□ -0.73
VTI1A-202ENST00000432306 NEFMP07197 916 aa10.51□□□□□ -0.73
VTI1A-202ENST00000432306 SALL2Q9Y467 1007 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-202ENST00000432306 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
VTI1A-202ENST00000432306 CFAP65Q6ZU64 1925 aaKnown RBP10.5□□□□□ -0.73
VTI1A-202ENST00000432306 XIRP1Q702N8 1843 aaKnown RBP10.5□□□□□ -0.73
VTI1A-202ENST00000432306 NLRP13Q86W25 1043 aa10.5□□□□□ -0.73
VTI1A-202ENST00000432306 TICAM2Q86XR7 235 aa10.5□□□□□ -0.73
VTI1A-202ENST00000432306 EXOC6Q8TAG9 804 aa10.5□□□□□ -0.73
VTI1A-202ENST00000432306 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
VTI1A-202ENST00000432306 CROCC2H7BZ55 1655 aa10.49□□□□□ -0.73
VTI1A-202ENST00000432306 ZMYND10O75800 440 aa10.49□□□□□ -0.73
VTI1A-202ENST00000432306 CCDC141Q6ZP82 1450 aa10.48□□□□□ -0.73
VTI1A-202ENST00000432306 CLSTN1O94985 981 aa10.48□□□□□ -0.73
VTI1A-202ENST00000432306 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
VTI1A-202ENST00000432306 PSMD1Q99460 953 aa10.48□□□□□ -0.73
VTI1A-202ENST00000432306 GPRASP1Q5JY77 1395 aa10.48□□□□□ -0.73
VTI1A-202ENST00000432306 CAMSAP2Q08AD1 1489 aa10.48□□□□□ -0.73
VTI1A-202ENST00000432306 LAMC1P11047 1609 aa10.47□□□□□ -0.73
VTI1A-202ENST00000432306 TRAK2O60296 914 aa10.47□□□□□ -0.73
VTI1A-202ENST00000432306 CC2D2BQ6DHV5 1058 aa10.47□□□□□ -0.73
VTI1A-202ENST00000432306 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-202ENST00000432306 CWC22Q9HCG8 908 aaKnown RBP10.47□□□□□ -0.73
VTI1A-202ENST00000432306 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-202ENST00000432306 UBR1Q8IWV7 1749 aa10.47□□□□□ -0.73
VTI1A-202ENST00000432306 KDM2BQ8NHM5 1336 aa10.47□□□□□ -0.73
VTI1A-202ENST00000432306 ZNF644Q9H582 1327 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-202ENST00000432306 A6NJR5 290 aa10.47□□□□□ -0.73
VTI1A-202ENST00000432306 FAM135BQ49AJ0 1406 aa10.46□□□□□ -0.73
VTI1A-202ENST00000432306 POTEAQ6S8J7 498 aa10.46□□□□□ -0.74
VTI1A-202ENST00000432306 SCAF11Q99590 1463 aaKnown RBP10.45□□□□□ -0.74
VTI1A-202ENST00000432306 ANKRD30AQ9BXX3 1397 aa10.45□□□□□ -0.74
VTI1A-202ENST00000432306 PER1O15534 1290 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-202ENST00000432306 EFCAB3Q8N7B9 438 aa10.45□□□□□ -0.74
VTI1A-202ENST00000432306 FBXW7Q969H0 707 aa10.45□□□□□ -0.74
VTI1A-202ENST00000432306 CABP2Q9NPB3 220 aa10.45□□□□□ -0.74
VTI1A-202ENST00000432306 SETD1AO15047 1707 aaKnown RBP10.45□□□□□ -0.74
VTI1A-202ENST00000432306 C19orf67A6NJJ6 358 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 CANXP27824 592 aaKnown RBP10.44□□□□□ -0.74
VTI1A-202ENST00000432306 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 ANKRD50Q9ULJ7 1429 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 ERVK-7P63135 1459 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 ABCC3O15438 1527 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 NFKBIBQ15653 356 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 CERS3Q8IU89 383 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 ZNF592Q92610 1267 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 AMOTL2Q9Y2J4 779 aa10.44□□□□□ -0.74
VTI1A-202ENST00000432306 ROBO1Q9Y6N7 1651 aa10.43□□□□□ -0.74
VTI1A-202ENST00000432306 EIF2AK4Q9P2K8 1649 aaKnown RBP10.43□□□□□ -0.74
VTI1A-202ENST00000432306 CEP152O94986 1710 aa10.42□□□□□ -0.74
VTI1A-202ENST00000432306 ARHGEF5Q12774 1597 aa10.42□□□□□ -0.74
VTI1A-202ENST00000432306 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
VTI1A-202ENST00000432306 CARD11Q9BXL7 1154 aa10.42□□□□□ -0.74
VTI1A-202ENST00000432306 SLIT1O75093 1534 aa10.42□□□□□ -0.74
VTI1A-202ENST00000432306 TSPY4P0CV99 314 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 TSPY10P0CW01 314 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 CENPQQ7L2Z9 268 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-202ENST00000432306 TRPC6Q9Y210 931 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
VTI1A-202ENST00000432306 ARHGAP23Q9P227 1491 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 PPP1R37O75864 691 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
VTI1A-202ENST00000432306 TXNDC2Q86VQ3 553 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 PHF8Q9UPP1 1060 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 EID1Q9Y6B2 187 aa10.41□□□□□ -0.74
VTI1A-202ENST00000432306 TRPM1Q7Z4N2 1603 aa10.4□□□□□ -0.74
VTI1A-202ENST00000432306 ST20-MTHFSA0A0A6YYL1 179 aa10.4□□□□□ -0.74
VTI1A-202ENST00000432306 FAM43AQ8N2R8 423 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms