RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
SMARCA4-203ENST00000429416 EXOC5O00471 708 aa21.01■□□□□ 0.95
SMARCA4-203ENST00000429416 SLC4A2P04920 1241 aa21.01■□□□□ 0.95
SMARCA4-203ENST00000429416 FOXD4L1Q9NU39 408 aa21■□□□□ 0.95
SMARCA4-203ENST00000429416 NUP153P49790 1475 aaKnown RBP21■□□□□ 0.95
SMARCA4-203ENST00000429416 CNNM1Q9NRU3 951 aa21■□□□□ 0.95
SMARCA4-203ENST00000429416 SLKQ9H2G2 1235 aaPredicted RBP21■□□□□ 0.95
SMARCA4-203ENST00000429416 C8orf37Q96NL8 207 aa21■□□□□ 0.95
SMARCA4-203ENST00000429416 WASHC4Q2M389 1173 aa21■□□□□ 0.95
SMARCA4-203ENST00000429416 RUFY2Q8WXA3 655 aa20.99■□□□□ 0.95
SMARCA4-203ENST00000429416 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
SMARCA4-203ENST00000429416 WDR62O43379 1518 aa20.99■□□□□ 0.95
SMARCA4-203ENST00000429416 GOLGA6L6A8MZA4 724 aa20.99■□□□□ 0.95
SMARCA4-203ENST00000429416 BRD4O60885 1362 aaPredicted RBP20.98■□□□□ 0.95
SMARCA4-203ENST00000429416 TRAPPC8Q9Y2L5 1435 aa20.98■□□□□ 0.95
SMARCA4-203ENST00000429416 HTATSF1O43719 755 aaKnown RBP20.98■□□□□ 0.95
SMARCA4-203ENST00000429416 STARD3NLO95772 234 aa20.97■□□□□ 0.95
SMARCA4-203ENST00000429416 PANK1Q8TE04 598 aa20.97■□□□□ 0.95
SMARCA4-203ENST00000429416 TRDNQ13061 729 aa20.96■□□□□ 0.95
SMARCA4-203ENST00000429416 C14orf93Q9H972 538 aaKnown RBP20.95■□□□□ 0.95
SMARCA4-203ENST00000429416 SURF6O75683 361 aaKnown RBP20.95■□□□□ 0.94
SMARCA4-203ENST00000429416 ABCC2Q92887 1545 aa20.95■□□□□ 0.94
SMARCA4-203ENST00000429416 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
SMARCA4-203ENST00000429416 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
SMARCA4-203ENST00000429416 GNAI3P08754 354 aa20.95■□□□□ 0.94
SMARCA4-203ENST00000429416 EMILIN1Q9Y6C2 1016 aa20.95■□□□□ 0.94
SMARCA4-203ENST00000429416 ST18O60284 1047 aa20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 CENPQQ7L2Z9 268 aaPredicted RBP20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 KIF3AQ9Y496 699 aa20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 LMTK3Q96Q04 1460 aa20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 NOP58Q9Y2X3 529 aaKnown RBP20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 DNTTIP2Q5QJE6 756 aaKnown RBP20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 TCEAL9Q9UHQ7 104 aa20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 ACEP12821 1306 aa20.94■□□□□ 0.94
SMARCA4-203ENST00000429416 MIS18AQ9NYP9 233 aa20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 ERC2O15083 957 aa20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 NRDCO43847 1150 aa20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 ZPR1O75312 459 aa20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 MPHOSPH8Q99549 860 aa20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 ZMYM3Q14202 1370 aa20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 ZKSCAN1P17029 563 aaPredicted RBP20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 NPHP3Q7Z494 1330 aa20.93■□□□□ 0.94
SMARCA4-203ENST00000429416 HMGB2P26583 209 aaKnown RBP20.92■□□□□ 0.94
SMARCA4-203ENST00000429416 CDCA7LQ96GN5 454 aa20.92■□□□□ 0.94
SMARCA4-203ENST00000429416 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
SMARCA4-203ENST00000429416 FAM184AQ8NB25 1140 aa20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 CCDC34Q96HJ3 373 aa20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 BCL11BQ9C0K0 894 aaPredicted RBP20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 MTMR7Q9Y216 660 aa20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 FCHSD2O94868 740 aa20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 FOXD4L5Q5VV16 416 aaPredicted RBP20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 CPLX2Q6PUV4 134 aaKnown RBP20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 CLASRPQ8N2M8 674 aaKnown RBP20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 FOXD4L4Q8WXT5 416 aaPredicted RBP20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 CCDC85AQ96PX6 553 aaPredicted RBP20.91■□□□□ 0.94
SMARCA4-203ENST00000429416 MCM10Q7L590 875 aa20.9■□□□□ 0.94
SMARCA4-203ENST00000429416 SF3A1Q15459 793 aaKnown RBP20.9■□□□□ 0.94
SMARCA4-203ENST00000429416 NFXL1Q6ZNB6 911 aa20.9■□□□□ 0.94
SMARCA4-203ENST00000429416 H3BQV1 296 aa20.89■□□□□ 0.94
SMARCA4-203ENST00000429416 IFFO2Q5TF58 517 aa20.89■□□□□ 0.94
SMARCA4-203ENST00000429416 ANO2Q9NQ90 1003 aa20.89■□□□□ 0.94
SMARCA4-203ENST00000429416 ABCC10Q5T3U5 1492 aa20.89■□□□□ 0.94
SMARCA4-203ENST00000429416 KIAA0556O60303 1618 aa20.89■□□□□ 0.94
SMARCA4-203ENST00000429416 SIL1Q9H173 461 aa20.89■□□□□ 0.93
SMARCA4-203ENST00000429416 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
SMARCA4-203ENST00000429416 DNAJC2Q99543 621 aaKnown RBP20.89■□□□□ 0.93
SMARCA4-203ENST00000429416 RIMS2Q9UQ26 1411 aa20.89■□□□□ 0.93
SMARCA4-203ENST00000429416 ERICH2A1L162 156 aa20.88■□□□□ 0.93
SMARCA4-203ENST00000429416 C19orf44Q9H6X5 657 aa20.88■□□□□ 0.93
SMARCA4-203ENST00000429416 CABLES1Q8TDN4 633 aa20.88■□□□□ 0.93
SMARCA4-203ENST00000429416 DRC7Q8IY82 874 aa20.88■□□□□ 0.93
SMARCA4-203ENST00000429416 SRCIN1Q9C0H9 1055 aa20.88■□□□□ 0.93
SMARCA4-203ENST00000429416 AMOTQ4VCS5 1084 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 THUMPD2Q9BTF0 503 aaKnown RBP20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 DCTN1Q14203 1278 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 CCDC57Q2TAC2 916 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 NUP160Q12769 1436 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 CPLX1O14810 134 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 RBM5P52756 815 aaKnown RBP eCLIP20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 FAM161AQ3B820 660 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 UGGT2Q9NYU1 1516 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 CREBRFQ8IUR6 639 aa20.87■□□□□ 0.93
SMARCA4-203ENST00000429416 GNL3LQ9NVN8 582 aaKnown RBP20.86■□□□□ 0.93
SMARCA4-203ENST00000429416 GBP4Q96PP9 640 aa20.86■□□□□ 0.93
SMARCA4-203ENST00000429416 IKQ13123 557 aaPredicted RBP20.86■□□□□ 0.93
SMARCA4-203ENST00000429416 C1orf115Q9H7X2 142 aa20.86■□□□□ 0.93
SMARCA4-203ENST00000429416 NFE2L2Q16236 605 aa20.85■□□□□ 0.93
SMARCA4-203ENST00000429416 MAP3K1Q13233 1512 aa20.85■□□□□ 0.93
SMARCA4-203ENST00000429416 ANKRD24Q8TF21 1146 aa20.85■□□□□ 0.93
SMARCA4-203ENST00000429416 ZNF652Q9Y2D9 606 aa20.85■□□□□ 0.93
SMARCA4-203ENST00000429416 RNF20Q5VTR2 975 aa20.84■□□□□ 0.93
SMARCA4-203ENST00000429416 FSD1Q9BTV5 496 aa20.84■□□□□ 0.93
SMARCA4-203ENST00000429416 REC8O95072 547 aa20.84■□□□□ 0.93
SMARCA4-203ENST00000429416 MCTP1Q6DN14 999 aa20.84■□□□□ 0.93
SMARCA4-203ENST00000429416 NOB1Q9ULX3 412 aaKnown RBP20.84■□□□□ 0.93
SMARCA4-203ENST00000429416 KCNA6P17658 529 aa20.84■□□□□ 0.93
SMARCA4-203ENST00000429416 GNAI2P04899 355 aa20.83■□□□□ 0.93
SMARCA4-203ENST00000429416 RALYLQ86SE5 291 aaKnown RBP20.83■□□□□ 0.92
SMARCA4-203ENST00000429416 CCAR1Q8IX12 1150 aaKnown RBP20.83■□□□□ 0.92
SMARCA4-203ENST00000429416 SLC4A3P48751 1232 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms