RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 NRKQ7Z2Y5 1582 aa10.79□□□□□ -0.68
HMGA1P4-201ENST00000428643 PER1O15534 1290 aaPredicted RBP10.79□□□□□ -0.68
HMGA1P4-201ENST00000428643 PIP4K2BP78356 416 aa10.79□□□□□ -0.68
HMGA1P4-201ENST00000428643 RGPD8O14715 1765 aaPredicted RBP10.79□□□□□ -0.68
HMGA1P4-201ENST00000428643 TTC21BQ7Z4L5 1316 aa10.79□□□□□ -0.68
HMGA1P4-201ENST00000428643 NSD2O96028 1365 aa10.78□□□□□ -0.68
HMGA1P4-201ENST00000428643 AKAP12Q02952 1782 aa10.78□□□□□ -0.68
HMGA1P4-201ENST00000428643 AMER1Q5JTC6 1135 aaPredicted RBP10.78□□□□□ -0.68
HMGA1P4-201ENST00000428643 KRT28Q7Z3Y7 464 aa10.78□□□□□ -0.68
HMGA1P4-201ENST00000428643 NME9Q86XW9 330 aa10.78□□□□□ -0.68
HMGA1P4-201ENST00000428643 DDX17Q92841 729 aaKnown RBP10.78□□□□□ -0.68
HMGA1P4-201ENST00000428643 TTC21AQ8NDW8 1320 aa10.78□□□□□ -0.68
HMGA1P4-201ENST00000428643 BRD4O60885 1362 aaPredicted RBP10.77□□□□□ -0.68
HMGA1P4-201ENST00000428643 NPC1L1Q9UHC9 1359 aa10.77□□□□□ -0.68
HMGA1P4-201ENST00000428643 SSH2Q76I76 1423 aa10.77□□□□□ -0.68
HMGA1P4-201ENST00000428643 ROBO1Q9Y6N7 1651 aa10.77□□□□□ -0.69
HMGA1P4-201ENST00000428643 GGNBP2Q9H3C7 697 aa10.77□□□□□ -0.69
HMGA1P4-201ENST00000428643 PXDNQ92626 1479 aa10.76□□□□□ -0.69
HMGA1P4-201ENST00000428643 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
HMGA1P4-201ENST00000428643 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
HMGA1P4-201ENST00000428643 MORC1Q86VD1 984 aa10.76□□□□□ -0.69
HMGA1P4-201ENST00000428643 PARD3Q8TEW0 1356 aa10.76□□□□□ -0.69
HMGA1P4-201ENST00000428643 TNS3Q68CZ2 1445 aa10.75□□□□□ -0.69
HMGA1P4-201ENST00000428643 SOCS7O14512 581 aa10.75□□□□□ -0.69
HMGA1P4-201ENST00000428643 FYB1O15117 783 aa10.75□□□□□ -0.69
HMGA1P4-201ENST00000428643 NUTM2GQ5VZR2 741 aa10.75□□□□□ -0.69
HMGA1P4-201ENST00000428643 ABTB2Q8N961 1025 aa10.75□□□□□ -0.69
HMGA1P4-201ENST00000428643 COG3Q96JB2 828 aa10.75□□□□□ -0.69
HMGA1P4-201ENST00000428643 SBNO1A3KN83 1393 aa10.75□□□□□ -0.69
HMGA1P4-201ENST00000428643 AHDC1Q5TGY3 1603 aaPredicted RBP10.74□□□□□ -0.69
HMGA1P4-201ENST00000428643 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
HMGA1P4-201ENST00000428643 TNNT2P45379 298 aaPredicted RBP10.74□□□□□ -0.69
HMGA1P4-201ENST00000428643 RALBP1Q15311 655 aa10.74□□□□□ -0.69
HMGA1P4-201ENST00000428643 PRKRIP1Q9H875 184 aaPredicted RBP10.74□□□□□ -0.69
HMGA1P4-201ENST00000428643 ZRANB1Q9UGI0 708 aa10.74□□□□□ -0.69
HMGA1P4-201ENST00000428643 SOS2Q07890 1332 aaPredicted RBP10.74□□□□□ -0.69
HMGA1P4-201ENST00000428643 NHSL1Q5SYE7 1610 aa10.73□□□□□ -0.69
HMGA1P4-201ENST00000428643 NLRP6P59044 892 aa10.73□□□□□ -0.69
HMGA1P4-201ENST00000428643 ARHGEF10O15013 1369 aa10.73□□□□□ -0.69
HMGA1P4-201ENST00000428643 OVOS2A0A0J9YW53 1432 aa10.73□□□□□ -0.69
HMGA1P4-201ENST00000428643 OVOS2Q6IE36 1432 aa10.73□□□□□ -0.69
HMGA1P4-201ENST00000428643 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
HMGA1P4-201ENST00000428643 TRPM3Q9HCF6 1732 aaPredicted RBP10.72□□□□□ -0.69
HMGA1P4-201ENST00000428643 KIF20BQ96Q89 1820 aa10.72□□□□□ -0.69
HMGA1P4-201ENST00000428643 SOX12O15370 315 aa10.72□□□□□ -0.69
HMGA1P4-201ENST00000428643 MIER1Q8N108 512 aa10.72□□□□□ -0.69
HMGA1P4-201ENST00000428643 SPATA31A3Q5VYP0 1347 aa10.72□□□□□ -0.69
HMGA1P4-201ENST00000428643 USP31Q70CQ4 1352 aa10.72□□□□□ -0.69
HMGA1P4-201ENST00000428643 MYBBP1AQ9BQG0 1328 aaKnown RBP10.71□□□□□ -0.69
HMGA1P4-201ENST00000428643 NLRP13Q86W25 1043 aa10.7□□□□□ -0.7
HMGA1P4-201ENST00000428643 USP19O94966 1318 aa10.69□□□□□ -0.7
HMGA1P4-201ENST00000428643 PPP2R1AP30153 589 aa10.69□□□□□ -0.7
HMGA1P4-201ENST00000428643 LRRC59Q96AG4 307 aaKnown RBP10.69□□□□□ -0.7
HMGA1P4-201ENST00000428643 ANKRD26Q9UPS8 1709 aa10.69□□□□□ -0.7
HMGA1P4-201ENST00000428643 ALS2Q96Q42 1657 aa10.69□□□□□ -0.7
HMGA1P4-201ENST00000428643 COL16A1Q07092 1604 aaPredicted RBP10.69□□□□□ -0.7
HMGA1P4-201ENST00000428643 MED1Q15648 1581 aaPredicted RBP10.69□□□□□ -0.7
HMGA1P4-201ENST00000428643 PHLPP1O60346 1717 aa10.68□□□□□ -0.7
HMGA1P4-201ENST00000428643 HAP1P54257 671 aaPredicted RBP10.68□□□□□ -0.7
HMGA1P4-201ENST00000428643 USP54Q70EL1 1684 aa10.67□□□□□ -0.7
HMGA1P4-201ENST00000428643 ZBTB7CA1YPR0 619 aa10.67□□□□□ -0.7
HMGA1P4-201ENST00000428643 PPM1GO15355 546 aaPredicted RBP10.67□□□□□ -0.7
HMGA1P4-201ENST00000428643 CACNB1Q02641 598 aaPredicted RBP10.67□□□□□ -0.7
HMGA1P4-201ENST00000428643 KCNH5Q8NCM2 988 aa10.67□□□□□ -0.7
HMGA1P4-201ENST00000428643 SLIT3O75094 1523 aa10.67□□□□□ -0.7
HMGA1P4-201ENST00000428643 AATKQ6ZMQ8 1374 aa10.66□□□□□ -0.7
HMGA1P4-201ENST00000428643 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
HMGA1P4-201ENST00000428643 RRS1Q15050 365 aaKnown RBP10.66□□□□□ -0.7
HMGA1P4-201ENST00000428643 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
HMGA1P4-201ENST00000428643 MRS2Q9HD23 443 aa10.66□□□□□ -0.7
HMGA1P4-201ENST00000428643 NFAT5O94916 1531 aa10.66□□□□□ -0.7
HMGA1P4-201ENST00000428643 CCER2I3L3R5 266 aa10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 GCP02774 474 aa10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 FBLN1P23142 703 aa10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 HSPA1LP34931 641 aa10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 MTHFSP49914 203 aa10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 CFAP53Q96M91 514 aa10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 SMG6Q86US8 1419 aaKnown RBP10.65□□□□□ -0.7
HMGA1P4-201ENST00000428643 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
HMGA1P4-201ENST00000428643 MAP3K19Q56UN5 1328 aa10.64□□□□□ -0.71
HMGA1P4-201ENST00000428643 CDK12Q9NYV4 1490 aaPredicted RBP10.64□□□□□ -0.71
HMGA1P4-201ENST00000428643 AMPHP49418 695 aa10.64□□□□□ -0.71
HMGA1P4-201ENST00000428643 POLKQ9UBT6 870 aa10.64□□□□□ -0.71
HMGA1P4-201ENST00000428643 JCADQ9P266 1359 aa10.64□□□□□ -0.71
HMGA1P4-201ENST00000428643 PHRF1Q9P1Y6 1649 aaKnown RBP10.63□□□□□ -0.71
HMGA1P4-201ENST00000428643 CCDC184Q52MB2 194 aa10.63□□□□□ -0.71
HMGA1P4-201ENST00000428643 RTL1A6NKG5 1358 aa10.63□□□□□ -0.71
HMGA1P4-201ENST00000428643 FLT4P35916 1363 aa10.63□□□□□ -0.71
HMGA1P4-201ENST00000428643 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
HMGA1P4-201ENST00000428643 ZC3H6P61129 1189 aaKnown RBP10.62□□□□□ -0.71
HMGA1P4-201ENST00000428643 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
HMGA1P4-201ENST00000428643 COL22A1Q8NFW1 1626 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P4-201ENST00000428643 NUTM2BA6NNL0 878 aaPredicted RBP10.61□□□□□ -0.71
HMGA1P4-201ENST00000428643 NUTM2EB1AL46 878 aaPredicted RBP10.61□□□□□ -0.71
HMGA1P4-201ENST00000428643 NUTM2AQ8IVF1 878 aaPredicted RBP10.61□□□□□ -0.71
HMGA1P4-201ENST00000428643 CPDO75976 1380 aa10.61□□□□□ -0.71
HMGA1P4-201ENST00000428643 KIF24Q5T7B8 1368 aa10.61□□□□□ -0.71
HMGA1P4-201ENST00000428643 ABCA3Q99758 1704 aa10.61□□□□□ -0.71
HMGA1P4-201ENST00000428643 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms