RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 PANK3Q9H999 370 aa17.75■□□□□ 0.43
CCHCR1-205ENST00000428174 MYOM1P52179 1685 aa17.74■□□□□ 0.43
CCHCR1-205ENST00000428174 TNS3Q68CZ2 1445 aa17.74■□□□□ 0.43
CCHCR1-205ENST00000428174 JCADQ9P266 1359 aa17.74■□□□□ 0.43
CCHCR1-205ENST00000428174 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
CCHCR1-205ENST00000428174 SSH2Q76I76 1423 aa17.73■□□□□ 0.43
CCHCR1-205ENST00000428174 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
CCHCR1-205ENST00000428174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCHCR1-205ENST00000428174 TTC21AQ8NDW8 1320 aa17.72■□□□□ 0.43
CCHCR1-205ENST00000428174 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-205ENST00000428174 ARHGEF10O15013 1369 aa17.72■□□□□ 0.43
CCHCR1-205ENST00000428174 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
CCHCR1-205ENST00000428174 CARD14Q9BXL6 1004 aa17.72■□□□□ 0.43
CCHCR1-205ENST00000428174 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
CCHCR1-205ENST00000428174 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
CCHCR1-205ENST00000428174 MON2Q7Z3U7 1717 aa17.71■□□□□ 0.43
CCHCR1-205ENST00000428174 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
CCHCR1-205ENST00000428174 NSD3Q9BZ95 1437 aa17.69■□□□□ 0.42
CCHCR1-205ENST00000428174 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
CCHCR1-205ENST00000428174 NLRP6P59044 892 aa17.68■□□□□ 0.42
CCHCR1-205ENST00000428174 NLRP13Q86W25 1043 aa17.68■□□□□ 0.42
CCHCR1-205ENST00000428174 NME9Q86XW9 330 aa17.68■□□□□ 0.42
CCHCR1-205ENST00000428174 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
CCHCR1-205ENST00000428174 NRKQ7Z2Y5 1582 aa17.66■□□□□ 0.42
CCHCR1-205ENST00000428174 KNSTRNQ9Y448 316 aa17.66■□□□□ 0.42
CCHCR1-205ENST00000428174 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
CCHCR1-205ENST00000428174 SPATA31A6Q5VVP1 1343 aa17.66■□□□□ 0.42
CCHCR1-205ENST00000428174 SHPRHQ149N8 1683 aa17.65■□□□□ 0.42
CCHCR1-205ENST00000428174 NUTM2BA6NNL0 878 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-205ENST00000428174 NUTM2EB1AL46 878 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-205ENST00000428174 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-205ENST00000428174 NUTM2AQ8IVF1 878 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-205ENST00000428174 CABLES1Q8TDN4 633 aa17.65■□□□□ 0.42
CCHCR1-205ENST00000428174 ZRANB1Q9UGI0 708 aa17.65■□□□□ 0.42
CCHCR1-205ENST00000428174 FYB1O15117 783 aa17.64■□□□□ 0.41
CCHCR1-205ENST00000428174 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-205ENST00000428174 USP31Q70CQ4 1352 aa17.64■□□□□ 0.41
CCHCR1-205ENST00000428174 COG3Q96JB2 828 aa17.63■□□□□ 0.41
CCHCR1-205ENST00000428174 GGNBP2Q9H3C7 697 aa17.63■□□□□ 0.41
CCHCR1-205ENST00000428174 USP19O94966 1318 aa17.63■□□□□ 0.41
CCHCR1-205ENST00000428174 COL22A1Q8NFW1 1626 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-205ENST00000428174 PIK3C2AO00443 1686 aa17.62■□□□□ 0.41
CCHCR1-205ENST00000428174 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-205ENST00000428174 MED1Q15648 1581 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-205ENST00000428174 OVOS2A0A0J9YW53 1432 aa17.59■□□□□ 0.41
CCHCR1-205ENST00000428174 OVOS2Q6IE36 1432 aa17.59■□□□□ 0.41
CCHCR1-205ENST00000428174 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
CCHCR1-205ENST00000428174 GCP02774 474 aa17.59■□□□□ 0.41
CCHCR1-205ENST00000428174 AMER1Q5JTC6 1135 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-205ENST00000428174 NSD2O96028 1365 aa17.58■□□□□ 0.4
CCHCR1-205ENST00000428174 SOX12O15370 315 aa17.58■□□□□ 0.4
CCHCR1-205ENST00000428174 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-205ENST00000428174 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.4
CCHCR1-205ENST00000428174 SLIT3O75094 1523 aa17.57■□□□□ 0.4
CCHCR1-205ENST00000428174 ZC3H6P61129 1189 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-205ENST00000428174 LRP6O75581 1613 aa17.56■□□□□ 0.4
CCHCR1-205ENST00000428174 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-205ENST00000428174 MORC1Q86VD1 984 aa17.55■□□□□ 0.4
CCHCR1-205ENST00000428174 KIF20BQ96Q89 1820 aa17.55■□□□□ 0.4
CCHCR1-205ENST00000428174 NPC1L1Q9UHC9 1359 aa17.54■□□□□ 0.4
CCHCR1-205ENST00000428174 CNGB1Q14028 1251 aaPredicted RBP17.54■□□□□ 0.4
CCHCR1-205ENST00000428174 CRYBG1Q9Y4K1 1723 aa17.54■□□□□ 0.4
CCHCR1-205ENST00000428174 USP54Q70EL1 1684 aa17.54■□□□□ 0.4
CCHCR1-205ENST00000428174 PHRF1Q9P1Y6 1649 aaKnown RBP17.54■□□□□ 0.4
CCHCR1-205ENST00000428174 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
CCHCR1-205ENST00000428174 ABCA3Q99758 1704 aa17.53■□□□□ 0.4
CCHCR1-205ENST00000428174 MARF1Q9Y4F3 1742 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-205ENST00000428174 ZBTB7CA1YPR0 619 aa17.53■□□□□ 0.4
CCHCR1-205ENST00000428174 PRDM11Q9NQV5 511 aa17.53■□□□□ 0.4
CCHCR1-205ENST00000428174 NGLY1Q96IV0 654 aa17.52■□□□□ 0.4
CCHCR1-205ENST00000428174 C8orf37Q96NL8 207 aa17.52■□□□□ 0.4
CCHCR1-205ENST00000428174 CPDO75976 1380 aa17.52■□□□□ 0.39
CCHCR1-205ENST00000428174 FAM83GA6ND36 823 aa17.51■□□□□ 0.39
CCHCR1-205ENST00000428174 FBLN1P23142 703 aa17.51■□□□□ 0.39
CCHCR1-205ENST00000428174 ARHGEF25Q86VW2 580 aa17.51■□□□□ 0.39
CCHCR1-205ENST00000428174 TNNT2P45379 298 aaPredicted RBP17.5■□□□□ 0.39
CCHCR1-205ENST00000428174 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
CCHCR1-205ENST00000428174 NFAT5O94916 1531 aa17.5■□□□□ 0.39
CCHCR1-205ENST00000428174 ANKRD26Q9UPS8 1709 aa17.48■□□□□ 0.39
CCHCR1-205ENST00000428174 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-205ENST00000428174 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
CCHCR1-205ENST00000428174 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
CCHCR1-205ENST00000428174 AFF2P51816 1311 aa17.47■□□□□ 0.39
CCHCR1-205ENST00000428174 AMPHP49418 695 aa17.46■□□□□ 0.39
CCHCR1-205ENST00000428174 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-205ENST00000428174 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
CCHCR1-205ENST00000428174 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
CCHCR1-205ENST00000428174 COL14A1Q05707 1796 aaKnown RBP17.44■□□□□ 0.38
CCHCR1-205ENST00000428174 IP6K1Q92551 441 aa17.44■□□□□ 0.38
CCHCR1-205ENST00000428174 POLKQ9UBT6 870 aa17.44■□□□□ 0.38
CCHCR1-205ENST00000428174 USP21Q9UK80 565 aa17.44■□□□□ 0.38
CCHCR1-205ENST00000428174 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
CCHCR1-205ENST00000428174 SLIT2O94813 1529 aa17.43■□□□□ 0.38
CCHCR1-205ENST00000428174 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
CCHCR1-205ENST00000428174 HOXC9P31274 260 aa17.42■□□□□ 0.38
CCHCR1-205ENST00000428174 EVA1CP58658 441 aa17.42■□□□□ 0.38
CCHCR1-205ENST00000428174 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
CCHCR1-205ENST00000428174 AXIN2Q9Y2T1 843 aa17.42■□□□□ 0.38
CCHCR1-205ENST00000428174 RTL1A6NKG5 1358 aa17.41■□□□□ 0.38
CCHCR1-205ENST00000428174 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms