RNA–Protein interactions for RNA: ENST00000428007.1

PAICSP3-201, Transcript of phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 3, humanhuman

BASIC

Gene PAICSP3, Length 1,168 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAICSP3-201ENST00000428007 SBNO1A3KN83 1393 aa12.48□□□□□ -0.41
PAICSP3-201ENST00000428007 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
PAICSP3-201ENST00000428007 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
PAICSP3-201ENST00000428007 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
PAICSP3-201ENST00000428007 FMN2Q9NZ56 1722 aa12.48□□□□□ -0.41
PAICSP3-201ENST00000428007 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
PAICSP3-201ENST00000428007 FOXO3O43524 673 aa12.47□□□□□ -0.41
PAICSP3-201ENST00000428007 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
PAICSP3-201ENST00000428007 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
PAICSP3-201ENST00000428007 HIRIP3Q9BW71 556 aaPredicted RBP12.47□□□□□ -0.41
PAICSP3-201ENST00000428007 PHLPP1O60346 1717 aa12.46□□□□□ -0.41
PAICSP3-201ENST00000428007 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
PAICSP3-201ENST00000428007 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
PAICSP3-201ENST00000428007 TMF1P82094 1093 aa12.45□□□□□ -0.42
PAICSP3-201ENST00000428007 PAXIP1Q6ZW49 1069 aaPredicted RBP12.45□□□□□ -0.42
PAICSP3-201ENST00000428007 POLR3AO14802 1390 aaPredicted RBP12.44□□□□□ -0.42
PAICSP3-201ENST00000428007 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
PAICSP3-201ENST00000428007 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
PAICSP3-201ENST00000428007 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
PAICSP3-201ENST00000428007 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
PAICSP3-201ENST00000428007 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
PAICSP3-201ENST00000428007 COL16A1Q07092 1604 aaPredicted RBP12.43□□□□□ -0.42
PAICSP3-201ENST00000428007 ST20-MTHFSA0A0A6YYL1 179 aa12.42□□□□□ -0.42
PAICSP3-201ENST00000428007 TERF2IPQ9NYB0 399 aa12.42□□□□□ -0.42
PAICSP3-201ENST00000428007 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
PAICSP3-201ENST00000428007 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
PAICSP3-201ENST00000428007 USP47Q96K76 1375 aa12.42□□□□□ -0.42
PAICSP3-201ENST00000428007 ATP7BP35670 1465 aa12.41□□□□□ -0.42
PAICSP3-201ENST00000428007 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
PAICSP3-201ENST00000428007 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
PAICSP3-201ENST00000428007 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
PAICSP3-201ENST00000428007 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
PAICSP3-201ENST00000428007 PXDNQ92626 1479 aa12.4□□□□□ -0.42
PAICSP3-201ENST00000428007 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
PAICSP3-201ENST00000428007 MEX3CQ5U5Q3 659 aaKnown RBP12.4□□□□□ -0.42
PAICSP3-201ENST00000428007 HDGFL2Q7Z4V5 671 aaPredicted RBP12.4□□□□□ -0.42
PAICSP3-201ENST00000428007 PMFBP1Q8TBY8 1022 aa12.4□□□□□ -0.42
PAICSP3-201ENST00000428007 TESK2Q96S53 571 aa12.4□□□□□ -0.42
PAICSP3-201ENST00000428007 ACEP12821 1306 aa12.39□□□□□ -0.43
PAICSP3-201ENST00000428007 QRICH2Q9H0J4 1663 aa12.39□□□□□ -0.43
PAICSP3-201ENST00000428007 TNS3Q68CZ2 1445 aa12.39□□□□□ -0.43
PAICSP3-201ENST00000428007 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
PAICSP3-201ENST00000428007 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
PAICSP3-201ENST00000428007 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
PAICSP3-201ENST00000428007 TTC21AQ8NDW8 1320 aa12.38□□□□□ -0.43
PAICSP3-201ENST00000428007 ZEB1P37275 1124 aaPredicted RBP12.38□□□□□ -0.43
PAICSP3-201ENST00000428007 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
PAICSP3-201ENST00000428007 DISP3Q9P2K9 1392 aa12.37□□□□□ -0.43
PAICSP3-201ENST00000428007 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
PAICSP3-201ENST00000428007 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
PAICSP3-201ENST00000428007 COL22A1Q8NFW1 1626 aaPredicted RBP12.36□□□□□ -0.43
PAICSP3-201ENST00000428007 ABTB2Q8N961 1025 aa12.35□□□□□ -0.43
PAICSP3-201ENST00000428007 DDX17Q92841 729 aaKnown RBP12.35□□□□□ -0.43
PAICSP3-201ENST00000428007 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
PAICSP3-201ENST00000428007 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
PAICSP3-201ENST00000428007 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
PAICSP3-201ENST00000428007 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
PAICSP3-201ENST00000428007 CPSF1Q10570 1443 aaKnown RBP12.34□□□□□ -0.43
PAICSP3-201ENST00000428007 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
PAICSP3-201ENST00000428007 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 NUBP1P53384 320 aa12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 TMC1Q8TDI8 760 aa12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 NGLY1Q96IV0 654 aa12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 USP6P35125 1406 aa12.33□□□□□ -0.44
PAICSP3-201ENST00000428007 TOPAZ1Q8N9V7 1692 aa12.32□□□□□ -0.44
PAICSP3-201ENST00000428007 KTN1Q86UP2 1357 aaKnown RBP12.32□□□□□ -0.44
PAICSP3-201ENST00000428007 XPCQ01831 940 aaPredicted RBP12.32□□□□□ -0.44
PAICSP3-201ENST00000428007 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
PAICSP3-201ENST00000428007 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
PAICSP3-201ENST00000428007 EDC4Q6P2E9 1401 aaKnown RBP12.3□□□□□ -0.44
PAICSP3-201ENST00000428007 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
PAICSP3-201ENST00000428007 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
PAICSP3-201ENST00000428007 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
PAICSP3-201ENST00000428007 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
PAICSP3-201ENST00000428007 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
PAICSP3-201ENST00000428007 HSPA5P11021 654 aaKnown RBP12.29□□□□□ -0.44
PAICSP3-201ENST00000428007 NLRP6P59044 892 aa12.29□□□□□ -0.44
PAICSP3-201ENST00000428007 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
PAICSP3-201ENST00000428007 ADAMTS2O95450 1211 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 C8orf37Q96NL8 207 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 SLC12A5Q9H2X9 1139 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 USP21Q9UK80 565 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 USP19O94966 1318 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 CPDO75976 1380 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 USP31Q70CQ4 1352 aa12.28□□□□□ -0.44
PAICSP3-201ENST00000428007 GCP02774 474 aa12.27□□□□□ -0.45
PAICSP3-201ENST00000428007 RXRBP28702 533 aa12.27□□□□□ -0.45
PAICSP3-201ENST00000428007 RBM6P78332 1123 aaKnown RBP12.27□□□□□ -0.45
PAICSP3-201ENST00000428007 UNC5CLQ8IV45 518 aa12.27□□□□□ -0.45
PAICSP3-201ENST00000428007 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
PAICSP3-201ENST00000428007 TRPM3Q9HCF6 1732 aaPredicted RBP12.27□□□□□ -0.45
PAICSP3-201ENST00000428007 AFF2P51816 1311 aa12.27□□□□□ -0.45
PAICSP3-201ENST00000428007 DCAF8Q5TAQ9 597 aa12.26□□□□□ -0.45
PAICSP3-201ENST00000428007 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms