RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 TONSLQ96HA7 1378 aa13.22□□□□□ -0.29
RFX3-AS1-202ENST00000427722 AFF2P51816 1311 aa13.22□□□□□ -0.29
RFX3-AS1-202ENST00000427722 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
RFX3-AS1-202ENST00000427722 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
RFX3-AS1-202ENST00000427722 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
RFX3-AS1-202ENST00000427722 HAX1O00165 279 aa13.21□□□□□ -0.29
RFX3-AS1-202ENST00000427722 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
RFX3-AS1-202ENST00000427722 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.3
RFX3-AS1-202ENST00000427722 USP32Q8NFA0 1604 aa13.21□□□□□ -0.3
RFX3-AS1-202ENST00000427722 SPATA31A3Q5VYP0 1347 aa13.2□□□□□ -0.3
RFX3-AS1-202ENST00000427722 CENPJQ9HC77 1338 aaPredicted RBP13.2□□□□□ -0.3
RFX3-AS1-202ENST00000427722 ATP7BP35670 1465 aa13.2□□□□□ -0.3
RFX3-AS1-202ENST00000427722 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
RFX3-AS1-202ENST00000427722 PSME1Q06323 249 aa13.19□□□□□ -0.3
RFX3-AS1-202ENST00000427722 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
RFX3-AS1-202ENST00000427722 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
RFX3-AS1-202ENST00000427722 SBNO1A3KN83 1393 aa13.19□□□□□ -0.3
RFX3-AS1-202ENST00000427722 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
RFX3-AS1-202ENST00000427722 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
RFX3-AS1-202ENST00000427722 NGLY1Q96IV0 654 aa13.18□□□□□ -0.3
RFX3-AS1-202ENST00000427722 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
RFX3-AS1-202ENST00000427722 COL22A1Q8NFW1 1626 aaPredicted RBP13.17□□□□□ -0.3
RFX3-AS1-202ENST00000427722 NGDNQ8NEJ9 315 aaKnown RBP13.17□□□□□ -0.3
RFX3-AS1-202ENST00000427722 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
RFX3-AS1-202ENST00000427722 HAP1P54257 671 aaPredicted RBP13.16□□□□□ -0.3
RFX3-AS1-202ENST00000427722 SRPK2P78362 688 aaKnown RBP13.16□□□□□ -0.3
RFX3-AS1-202ENST00000427722 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
RFX3-AS1-202ENST00000427722 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
RFX3-AS1-202ENST00000427722 PROM2Q8N271 834 aa13.15□□□□□ -0.3
RFX3-AS1-202ENST00000427722 RXRBP28702 533 aa13.14□□□□□ -0.31
RFX3-AS1-202ENST00000427722 CABLES1Q8TDN4 633 aa13.14□□□□□ -0.31
RFX3-AS1-202ENST00000427722 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
RFX3-AS1-202ENST00000427722 USP21Q9UK80 565 aa13.14□□□□□ -0.31
RFX3-AS1-202ENST00000427722 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
RFX3-AS1-202ENST00000427722 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
RFX3-AS1-202ENST00000427722 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
RFX3-AS1-202ENST00000427722 CARD11Q9BXL7 1154 aa13.13□□□□□ -0.31
RFX3-AS1-202ENST00000427722 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
RFX3-AS1-202ENST00000427722 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
RFX3-AS1-202ENST00000427722 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
RFX3-AS1-202ENST00000427722 ACEP12821 1306 aa13.12□□□□□ -0.31
RFX3-AS1-202ENST00000427722 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
RFX3-AS1-202ENST00000427722 PPIP5K1Q6PFW1 1433 aa13.11□□□□□ -0.31
RFX3-AS1-202ENST00000427722 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
RFX3-AS1-202ENST00000427722 POLR3AO14802 1390 aaPredicted RBP13.1□□□□□ -0.31
RFX3-AS1-202ENST00000427722 RBM6P78332 1123 aaKnown RBP13.1□□□□□ -0.31
RFX3-AS1-202ENST00000427722 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
RFX3-AS1-202ENST00000427722 RGS12O14924 1447 aa13.1□□□□□ -0.31
RFX3-AS1-202ENST00000427722 TOPAZ1Q8N9V7 1692 aa13.09□□□□□ -0.31
RFX3-AS1-202ENST00000427722 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
RFX3-AS1-202ENST00000427722 ATRNO75882 1429 aa13.09□□□□□ -0.31
RFX3-AS1-202ENST00000427722 TRPM3Q9HCF6 1732 aaPredicted RBP13.09□□□□□ -0.31
RFX3-AS1-202ENST00000427722 BCL9LQ86UU0 1499 aa13.09□□□□□ -0.31
RFX3-AS1-202ENST00000427722 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
RFX3-AS1-202ENST00000427722 ITSN1Q15811 1721 aa13.08□□□□□ -0.32
RFX3-AS1-202ENST00000427722 NUTM2GQ5VZR2 741 aa13.08□□□□□ -0.32
RFX3-AS1-202ENST00000427722 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
RFX3-AS1-202ENST00000427722 SLIT2O94813 1529 aa13.08□□□□□ -0.32
RFX3-AS1-202ENST00000427722 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
RFX3-AS1-202ENST00000427722 EVX2Q03828 476 aa13.06□□□□□ -0.32
RFX3-AS1-202ENST00000427722 UNC5CLQ8IV45 518 aa13.06□□□□□ -0.32
RFX3-AS1-202ENST00000427722 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
RFX3-AS1-202ENST00000427722 SBNO2Q9Y2G9 1366 aa13.06□□□□□ -0.32
RFX3-AS1-202ENST00000427722 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
RFX3-AS1-202ENST00000427722 FKBP8Q14318 412 aa13.05□□□□□ -0.32
RFX3-AS1-202ENST00000427722 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
RFX3-AS1-202ENST00000427722 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
RFX3-AS1-202ENST00000427722 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
RFX3-AS1-202ENST00000427722 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
RFX3-AS1-202ENST00000427722 USP6P35125 1406 aa13.05□□□□□ -0.32
RFX3-AS1-202ENST00000427722 PRDM11Q9NQV5 511 aa13.04□□□□□ -0.32
RFX3-AS1-202ENST00000427722 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
RFX3-AS1-202ENST00000427722 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
RFX3-AS1-202ENST00000427722 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
RFX3-AS1-202ENST00000427722 CCER1Q8TC90 406 aaPredicted RBP13.03□□□□□ -0.32
RFX3-AS1-202ENST00000427722 GJD4Q96KN9 370 aaPredicted RBP13.03□□□□□ -0.32
RFX3-AS1-202ENST00000427722 CCDC9Q9Y3X0 531 aaKnown RBP13.02□□□□□ -0.33
RFX3-AS1-202ENST00000427722 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
RFX3-AS1-202ENST00000427722 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
RFX3-AS1-202ENST00000427722 USP19O94966 1318 aa13.01□□□□□ -0.33
RFX3-AS1-202ENST00000427722 USP47Q96K76 1375 aa13.01□□□□□ -0.33
RFX3-AS1-202ENST00000427722 MARF1Q9Y4F3 1742 aaKnown RBP13.01□□□□□ -0.33
RFX3-AS1-202ENST00000427722 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
RFX3-AS1-202ENST00000427722 ST20-MTHFSA0A0A6YYL1 179 aa13□□□□□ -0.33
RFX3-AS1-202ENST00000427722 ZC3H6P61129 1189 aaKnown RBP13□□□□□ -0.33
RFX3-AS1-202ENST00000427722 CHRNA2Q15822 529 aa13□□□□□ -0.33
RFX3-AS1-202ENST00000427722 VPS72Q15906 364 aa13□□□□□ -0.33
RFX3-AS1-202ENST00000427722 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
RFX3-AS1-202ENST00000427722 TMC1Q8TDI8 760 aa12.99□□□□□ -0.33
RFX3-AS1-202ENST00000427722 TESK2Q96S53 571 aa12.99□□□□□ -0.33
RFX3-AS1-202ENST00000427722 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
RFX3-AS1-202ENST00000427722 GLI3P10071 1580 aa12.98□□□□□ -0.33
RFX3-AS1-202ENST00000427722 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
RFX3-AS1-202ENST00000427722 SSH2Q76I76 1423 aa12.98□□□□□ -0.33
RFX3-AS1-202ENST00000427722 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.33
RFX3-AS1-202ENST00000427722 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
RFX3-AS1-202ENST00000427722 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
RFX3-AS1-202ENST00000427722 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
RFX3-AS1-202ENST00000427722 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
RFX3-AS1-202ENST00000427722 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms