RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
VSIG4-203ENST00000427538 MST1RQ04912 1400 aa12.37□□□□□ -0.43
VSIG4-203ENST00000427538 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
VSIG4-203ENST00000427538 NUBP1P53384 320 aa12.37□□□□□ -0.43
VSIG4-203ENST00000427538 GPRASP1Q5JY77 1395 aa12.37□□□□□ -0.43
VSIG4-203ENST00000427538 C1orf167Q5SNV9 1468 aa12.37□□□□□ -0.43
VSIG4-203ENST00000427538 NALCNQ8IZF0 1738 aa12.36□□□□□ -0.43
VSIG4-203ENST00000427538 CDC42BPGQ6DT37 1551 aa12.35□□□□□ -0.43
VSIG4-203ENST00000427538 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
VSIG4-203ENST00000427538 FOXO3O43524 673 aa12.35□□□□□ -0.43
VSIG4-203ENST00000427538 PSME1Q06323 249 aa12.35□□□□□ -0.43
VSIG4-203ENST00000427538 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
VSIG4-203ENST00000427538 PMFBP1Q8TBY8 1022 aa12.35□□□□□ -0.43
VSIG4-203ENST00000427538 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
VSIG4-203ENST00000427538 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
VSIG4-203ENST00000427538 EIF4G2P78344 907 aaKnown RBP eCLIP12.34□□□□□ -0.43
VSIG4-203ENST00000427538 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
VSIG4-203ENST00000427538 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
VSIG4-203ENST00000427538 USP47Q96K76 1375 aa12.33□□□□□ -0.44
VSIG4-203ENST00000427538 LRRC59Q96AG4 307 aaKnown RBP12.33□□□□□ -0.44
VSIG4-203ENST00000427538 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
VSIG4-203ENST00000427538 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
VSIG4-203ENST00000427538 ARHGEF28Q8N1W1 1705 aaKnown RBP12.32□□□□□ -0.44
VSIG4-203ENST00000427538 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
VSIG4-203ENST00000427538 TMF1P82094 1093 aa12.32□□□□□ -0.44
VSIG4-203ENST00000427538 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
VSIG4-203ENST00000427538 DDX17Q92841 729 aaKnown RBP12.32□□□□□ -0.44
VSIG4-203ENST00000427538 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
VSIG4-203ENST00000427538 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
VSIG4-203ENST00000427538 CDCA8Q53HL2 280 aa12.31□□□□□ -0.44
VSIG4-203ENST00000427538 TMC1Q8TDI8 760 aa12.31□□□□□ -0.44
VSIG4-203ENST00000427538 HAP1P54257 671 aaPredicted RBP12.3□□□□□ -0.44
VSIG4-203ENST00000427538 KRT28Q7Z3Y7 464 aa12.3□□□□□ -0.44
VSIG4-203ENST00000427538 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
VSIG4-203ENST00000427538 POLR3GLQ9BT43 218 aa12.3□□□□□ -0.44
VSIG4-203ENST00000427538 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
VSIG4-203ENST00000427538 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
VSIG4-203ENST00000427538 ATAD2Q6PL18 1390 aa12.29□□□□□ -0.44
VSIG4-203ENST00000427538 JCADQ9P266 1359 aa12.29□□□□□ -0.44
VSIG4-203ENST00000427538 ZEB1P37275 1124 aaPredicted RBP12.28□□□□□ -0.44
VSIG4-203ENST00000427538 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
VSIG4-203ENST00000427538 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
VSIG4-203ENST00000427538 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
VSIG4-203ENST00000427538 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
VSIG4-203ENST00000427538 QRICH2Q9H0J4 1663 aa12.28□□□□□ -0.44
VSIG4-203ENST00000427538 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
VSIG4-203ENST00000427538 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
VSIG4-203ENST00000427538 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
VSIG4-203ENST00000427538 HSPA5P11021 654 aaKnown RBP12.27□□□□□ -0.45
VSIG4-203ENST00000427538 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
VSIG4-203ENST00000427538 FMN2Q9NZ56 1722 aa12.27□□□□□ -0.45
VSIG4-203ENST00000427538 PPIP5K1Q6PFW1 1433 aa12.27□□□□□ -0.45
VSIG4-203ENST00000427538 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
VSIG4-203ENST00000427538 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
VSIG4-203ENST00000427538 ACEP12821 1306 aa12.26□□□□□ -0.45
VSIG4-203ENST00000427538 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
VSIG4-203ENST00000427538 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
VSIG4-203ENST00000427538 MAP3K13O43283 966 aa12.25□□□□□ -0.45
VSIG4-203ENST00000427538 AHDC1Q5TGY3 1603 aaPredicted RBP12.25□□□□□ -0.45
VSIG4-203ENST00000427538 ATP7BP35670 1465 aa12.24□□□□□ -0.45
VSIG4-203ENST00000427538 SPATA31A6Q5VVP1 1343 aa12.24□□□□□ -0.45
VSIG4-203ENST00000427538 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
VSIG4-203ENST00000427538 TESK2Q96S53 571 aa12.24□□□□□ -0.45
VSIG4-203ENST00000427538 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
VSIG4-203ENST00000427538 KIF1AQ12756 1690 aa12.23□□□□□ -0.45
VSIG4-203ENST00000427538 LHX8Q68G74 356 aa12.23□□□□□ -0.45
VSIG4-203ENST00000427538 SPATA31A3Q5VYP0 1347 aa12.22□□□□□ -0.45
VSIG4-203ENST00000427538 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
VSIG4-203ENST00000427538 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
VSIG4-203ENST00000427538 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
VSIG4-203ENST00000427538 ABTB2Q8N961 1025 aa12.21□□□□□ -0.45
VSIG4-203ENST00000427538 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.45
VSIG4-203ENST00000427538 SBNO1A3KN83 1393 aa12.2□□□□□ -0.46
VSIG4-203ENST00000427538 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
VSIG4-203ENST00000427538 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
VSIG4-203ENST00000427538 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
VSIG4-203ENST00000427538 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
VSIG4-203ENST00000427538 POLR3AO14802 1390 aaPredicted RBP12.19□□□□□ -0.46
VSIG4-203ENST00000427538 KTN1Q86UP2 1357 aaKnown RBP12.19□□□□□ -0.46
VSIG4-203ENST00000427538 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
VSIG4-203ENST00000427538 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
VSIG4-203ENST00000427538 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
VSIG4-203ENST00000427538 NHSL1Q5SYE7 1610 aa12.19□□□□□ -0.46
VSIG4-203ENST00000427538 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
VSIG4-203ENST00000427538 ITSN1Q15811 1721 aa12.19□□□□□ -0.46
VSIG4-203ENST00000427538 PXDNQ92626 1479 aa12.19□□□□□ -0.46
VSIG4-203ENST00000427538 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
VSIG4-203ENST00000427538 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
VSIG4-203ENST00000427538 NLRP13Q86W25 1043 aa12.18□□□□□ -0.46
VSIG4-203ENST00000427538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.18□□□□□ -0.46
VSIG4-203ENST00000427538 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
VSIG4-203ENST00000427538 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
VSIG4-203ENST00000427538 NLRP6P59044 892 aa12.17□□□□□ -0.46
VSIG4-203ENST00000427538 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
VSIG4-203ENST00000427538 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
VSIG4-203ENST00000427538 RGPD8O14715 1765 aaPredicted RBP12.16□□□□□ -0.46
VSIG4-203ENST00000427538 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
VSIG4-203ENST00000427538 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
VSIG4-203ENST00000427538 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
VSIG4-203ENST00000427538 TTC21AQ8NDW8 1320 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms