RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 PNPLA6Q8IY17 1366 aa11.32□□□□□ -0.6
SH3D19-204ENST00000427414 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
SH3D19-204ENST00000427414 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
SH3D19-204ENST00000427414 KCNA6P17658 529 aa11.3□□□□□ -0.6
SH3D19-204ENST00000427414 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
SH3D19-204ENST00000427414 ADGRL3Q9HAR2 1447 aa11.3□□□□□ -0.6
SH3D19-204ENST00000427414 CABP1Q9NZU7 370 aa11.3□□□□□ -0.6
SH3D19-204ENST00000427414 COL3A1P02461 1466 aaPredicted RBP11.29□□□□□ -0.6
SH3D19-204ENST00000427414 DCCP43146 1447 aa11.29□□□□□ -0.6
SH3D19-204ENST00000427414 FYB1O15117 783 aa11.29□□□□□ -0.6
SH3D19-204ENST00000427414 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
SH3D19-204ENST00000427414 USP31Q70CQ4 1352 aa11.29□□□□□ -0.6
SH3D19-204ENST00000427414 KIF1AQ12756 1690 aa11.28□□□□□ -0.6
SH3D19-204ENST00000427414 CDK12Q9NYV4 1490 aaPredicted RBP11.28□□□□□ -0.6
SH3D19-204ENST00000427414 USP6P35125 1406 aa11.28□□□□□ -0.6
SH3D19-204ENST00000427414 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
SH3D19-204ENST00000427414 B4GALNT3Q6L9W6 998 aa11.28□□□□□ -0.6
SH3D19-204ENST00000427414 SLC26A8Q96RN1 970 aa11.27□□□□□ -0.6
SH3D19-204ENST00000427414 NUDCQ9Y266 331 aa11.27□□□□□ -0.6
SH3D19-204ENST00000427414 NBR1Q14596 966 aa11.27□□□□□ -0.61
SH3D19-204ENST00000427414 MST1RQ04912 1400 aa11.27□□□□□ -0.61
SH3D19-204ENST00000427414 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
SH3D19-204ENST00000427414 RNF123Q5XPI4 1314 aa11.26□□□□□ -0.61
SH3D19-204ENST00000427414 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
SH3D19-204ENST00000427414 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
SH3D19-204ENST00000427414 OVOS2A0A0J9YW53 1432 aa11.25□□□□□ -0.61
SH3D19-204ENST00000427414 OVOS2Q6IE36 1432 aa11.25□□□□□ -0.61
SH3D19-204ENST00000427414 CCDC27Q2M243 656 aa11.25□□□□□ -0.61
SH3D19-204ENST00000427414 IQSEC2Q5JU85 1478 aa11.25□□□□□ -0.61
SH3D19-204ENST00000427414 ZNF521Q96K83 1311 aa11.25□□□□□ -0.61
SH3D19-204ENST00000427414 ADAMTS8Q9UP79 889 aa11.24□□□□□ -0.61
SH3D19-204ENST00000427414 PHRF1Q9P1Y6 1649 aaKnown RBP11.23□□□□□ -0.61
SH3D19-204ENST00000427414 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
SH3D19-204ENST00000427414 MTHFSP49914 203 aa11.22□□□□□ -0.61
SH3D19-204ENST00000427414 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
SH3D19-204ENST00000427414 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
SH3D19-204ENST00000427414 PLPPR3Q6T4P5 718 aa11.22□□□□□ -0.61
SH3D19-204ENST00000427414 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
SH3D19-204ENST00000427414 LMTK3Q96Q04 1460 aa11.21□□□□□ -0.61
SH3D19-204ENST00000427414 ACEP12821 1306 aa11.21□□□□□ -0.61
SH3D19-204ENST00000427414 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
SH3D19-204ENST00000427414 COG3Q96JB2 828 aa11.21□□□□□ -0.61
SH3D19-204ENST00000427414 TRMT2AQ8IZ69 625 aaKnown RBP11.2□□□□□ -0.62
SH3D19-204ENST00000427414 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
SH3D19-204ENST00000427414 MARF1Q9Y4F3 1742 aaKnown RBP11.2□□□□□ -0.62
SH3D19-204ENST00000427414 STRCQ7RTU9 1775 aa11.19□□□□□ -0.62
SH3D19-204ENST00000427414 WDR63Q8IWG1 891 aa11.19□□□□□ -0.62
SH3D19-204ENST00000427414 FCHSD2O94868 740 aa11.18□□□□□ -0.62
SH3D19-204ENST00000427414 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
SH3D19-204ENST00000427414 GGNBP2Q9H3C7 697 aa11.18□□□□□ -0.62
SH3D19-204ENST00000427414 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
SH3D19-204ENST00000427414 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
SH3D19-204ENST00000427414 POLKQ9UBT6 870 aa11.18□□□□□ -0.62
SH3D19-204ENST00000427414 ABCC6O95255 1503 aa11.17□□□□□ -0.62
SH3D19-204ENST00000427414 IL16Q14005 1332 aa11.17□□□□□ -0.62
SH3D19-204ENST00000427414 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
SH3D19-204ENST00000427414 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
SH3D19-204ENST00000427414 NCKAP5LQ9HCH0 1330 aa11.16□□□□□ -0.62
SH3D19-204ENST00000427414 E9PSI1 815 aa11.16□□□□□ -0.62
SH3D19-204ENST00000427414 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
SH3D19-204ENST00000427414 C19orf44Q9H6X5 657 aa11.16□□□□□ -0.62
SH3D19-204ENST00000427414 STRCP1A6NGW2 1772 aa11.16□□□□□ -0.62
SH3D19-204ENST00000427414 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
SH3D19-204ENST00000427414 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
SH3D19-204ENST00000427414 CT47B1P0C2W7 299 aaPredicted RBP11.15□□□□□ -0.62
SH3D19-204ENST00000427414 ANP32AP39687 249 aaKnown RBP11.15□□□□□ -0.62
SH3D19-204ENST00000427414 SLIT3O75094 1523 aa11.15□□□□□ -0.62
SH3D19-204ENST00000427414 PLEKHF1Q96S99 279 aa11.15□□□□□ -0.62
SH3D19-204ENST00000427414 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.62
SH3D19-204ENST00000427414 SLFN5Q08AF3 891 aa11.14□□□□□ -0.63
SH3D19-204ENST00000427414 SBNO1A3KN83 1393 aa11.14□□□□□ -0.63
SH3D19-204ENST00000427414 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
SH3D19-204ENST00000427414 IPO9Q96P70 1041 aaKnown RBP11.14□□□□□ -0.63
SH3D19-204ENST00000427414 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
SH3D19-204ENST00000427414 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
SH3D19-204ENST00000427414 DMRT2Q9Y5R5 561 aa11.14□□□□□ -0.63
SH3D19-204ENST00000427414 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
SH3D19-204ENST00000427414 NME9Q86XW9 330 aa11.13□□□□□ -0.63
SH3D19-204ENST00000427414 IL13P35225 146 aa11.13□□□□□ -0.63
SH3D19-204ENST00000427414 C1orf167Q5SNV9 1468 aa11.13□□□□□ -0.63
SH3D19-204ENST00000427414 XIRP1Q702N8 1843 aaKnown RBP11.13□□□□□ -0.63
SH3D19-204ENST00000427414 ARHGEF10O15013 1369 aa11.12□□□□□ -0.63
SH3D19-204ENST00000427414 ALS2Q96Q42 1657 aa11.12□□□□□ -0.63
SH3D19-204ENST00000427414 PEAK1Q9H792 1746 aa11.12□□□□□ -0.63
SH3D19-204ENST00000427414 FLT4P35916 1363 aa11.12□□□□□ -0.63
SH3D19-204ENST00000427414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.12□□□□□ -0.63
SH3D19-204ENST00000427414 CCDC136Q96JN2 1154 aa11.12□□□□□ -0.63
SH3D19-204ENST00000427414 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
SH3D19-204ENST00000427414 DUSP27Q5VZP5 1158 aa11.12□□□□□ -0.63
SH3D19-204ENST00000427414 PROSER2Q86WR7 435 aaPredicted RBP11.12□□□□□ -0.63
SH3D19-204ENST00000427414 NFAT5O94916 1531 aa11.11□□□□□ -0.63
SH3D19-204ENST00000427414 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
SH3D19-204ENST00000427414 APAF1O14727 1248 aa11.11□□□□□ -0.63
SH3D19-204ENST00000427414 NEFMP07197 916 aa11.11□□□□□ -0.63
SH3D19-204ENST00000427414 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
SH3D19-204ENST00000427414 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
SH3D19-204ENST00000427414 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
SH3D19-204ENST00000427414 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
SH3D19-204ENST00000427414 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
SH3D19-204ENST00000427414 SENP3Q9H4L4 574 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms