RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 DEKP35659 375 aaKnown RBP14.99□□□□□ -0.01
FIRRE-201ENST00000427391 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
FIRRE-201ENST00000427391 HDGFL2Q7Z4V5 671 aaPredicted RBP14.99□□□□□ -0.01
FIRRE-201ENST00000427391 TRIM35Q9UPQ4 493 aa14.99□□□□□ -0.01
FIRRE-201ENST00000427391 NLRP1Q9C000 1473 aa14.99□□□□□ -0.01
FIRRE-201ENST00000427391 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
FIRRE-201ENST00000427391 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
FIRRE-201ENST00000427391 CCDC27Q2M243 656 aa14.98□□□□□ -0.01
FIRRE-201ENST00000427391 ARHGEF40Q8TER5 1519 aa14.97□□□□□ -0.01
FIRRE-201ENST00000427391 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
FIRRE-201ENST00000427391 TXNDC2Q86VQ3 553 aa14.97□□□□□ -0.01
FIRRE-201ENST00000427391 COL3A1P02461 1466 aaPredicted RBP14.97□□□□□ -0.01
FIRRE-201ENST00000427391 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
FIRRE-201ENST00000427391 RIMS2Q9UQ26 1411 aa14.96□□□□□ -0.01
FIRRE-201ENST00000427391 MYH16Q9H6N6 1097 aa14.96□□□□□ -0.01
FIRRE-201ENST00000427391 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.02
FIRRE-201ENST00000427391 NINLQ9Y2I6 1382 aa14.96□□□□□ -0.02
FIRRE-201ENST00000427391 RIPK4P57078 832 aa14.95□□□□□ -0.02
FIRRE-201ENST00000427391 METP08581 1390 aa14.94□□□□□ -0.02
FIRRE-201ENST00000427391 HMOX1P09601 288 aa14.94□□□□□ -0.02
FIRRE-201ENST00000427391 EMILIN1Q9Y6C2 1016 aa14.94□□□□□ -0.02
FIRRE-201ENST00000427391 ADGRB2O60241 1585 aa14.94□□□□□ -0.02
FIRRE-201ENST00000427391 SEC24BO95487 1268 aa14.93□□□□□ -0.02
FIRRE-201ENST00000427391 NME9Q86XW9 330 aa14.93□□□□□ -0.02
FIRRE-201ENST00000427391 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
FIRRE-201ENST00000427391 SSH1Q8WYL5 1049 aa14.93□□□□□ -0.02
FIRRE-201ENST00000427391 THUMPD2Q9BTF0 503 aaKnown RBP14.93□□□□□ -0.02
FIRRE-201ENST00000427391 POLKQ9UBT6 870 aa14.93□□□□□ -0.02
FIRRE-201ENST00000427391 PRKAR2BP31323 418 aa14.92□□□□□ -0.02
FIRRE-201ENST00000427391 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
FIRRE-201ENST00000427391 NUTM2FA1L443 756 aa14.91□□□□□ -0.02
FIRRE-201ENST00000427391 NEFMP07197 916 aa14.91□□□□□ -0.02
FIRRE-201ENST00000427391 FTSJ3Q8IY81 847 aaKnown RBP14.91□□□□□ -0.02
FIRRE-201ENST00000427391 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
FIRRE-201ENST00000427391 TRIM27P14373 513 aa14.9□□□□□ -0.02
FIRRE-201ENST00000427391 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
FIRRE-201ENST00000427391 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
FIRRE-201ENST00000427391 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
FIRRE-201ENST00000427391 MVPQ14764 893 aaKnown RBP14.89□□□□□ -0.03
FIRRE-201ENST00000427391 RRS1Q15050 365 aaKnown RBP14.89□□□□□ -0.03
FIRRE-201ENST00000427391 DZIP1LQ8IYY4 767 aaKnown RBP14.89□□□□□ -0.03
FIRRE-201ENST00000427391 SPATA31D1Q6ZQQ2 1576 aa14.89□□□□□ -0.03
FIRRE-201ENST00000427391 ZMYM3Q14202 1370 aa14.89□□□□□ -0.03
FIRRE-201ENST00000427391 WASLO00401 505 aaPredicted RBP14.89□□□□□ -0.03
FIRRE-201ENST00000427391 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
FIRRE-201ENST00000427391 AGLP35573 1532 aa14.88□□□□□ -0.03
FIRRE-201ENST00000427391 PNPLA6Q8IY17 1366 aa14.88□□□□□ -0.03
FIRRE-201ENST00000427391 NOB1Q9ULX3 412 aaKnown RBP14.88□□□□□ -0.03
FIRRE-201ENST00000427391 ANKRD26Q9UPS8 1709 aa14.88□□□□□ -0.03
FIRRE-201ENST00000427391 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
FIRRE-201ENST00000427391 PPIP5K1Q6PFW1 1433 aa14.88□□□□□ -0.03
FIRRE-201ENST00000427391 ITPRIPQ8IWB1 547 aa14.87□□□□□ -0.03
FIRRE-201ENST00000427391 NUDT16Q96DE0 195 aaKnown RBP14.87□□□□□ -0.03
FIRRE-201ENST00000427391 MED14O60244 1454 aa14.87□□□□□ -0.03
FIRRE-201ENST00000427391 USP19O94966 1318 aa14.87□□□□□ -0.03
FIRRE-201ENST00000427391 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
FIRRE-201ENST00000427391 CEBPAP49715 358 aaPredicted RBP14.87□□□□□ -0.03
FIRRE-201ENST00000427391 SETD1AO15047 1707 aaKnown RBP14.87□□□□□ -0.03
FIRRE-201ENST00000427391 PMFBP1Q8TBY8 1022 aa14.86□□□□□ -0.03
FIRRE-201ENST00000427391 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
FIRRE-201ENST00000427391 KIF20BQ96Q89 1820 aa14.86□□□□□ -0.03
FIRRE-201ENST00000427391 ELL2O00472 640 aaPredicted RBP14.86□□□□□ -0.03
FIRRE-201ENST00000427391 NRXN3Q9Y4C0 1643 aa14.86□□□□□ -0.03
FIRRE-201ENST00000427391 FCHSD2O94868 740 aa14.85□□□□□ -0.03
FIRRE-201ENST00000427391 TMEM57Q8N5G2 664 aa14.85□□□□□ -0.03
FIRRE-201ENST00000427391 MAP2P11137 1827 aaKnown RBP14.84□□□□□ -0.03
FIRRE-201ENST00000427391 REREQ9P2R6 1566 aa14.84□□□□□ -0.03
FIRRE-201ENST00000427391 PRR36Q9H6K5 1346 aa14.84□□□□□ -0.03
FIRRE-201ENST00000427391 ATF7IPQ6VMQ6 1270 aa14.84□□□□□ -0.03
FIRRE-201ENST00000427391 CPS1P31327 1500 aa14.83□□□□□ -0.03
FIRRE-201ENST00000427391 NCBP3Q53F19 620 aaKnown RBP14.83□□□□□ -0.04
FIRRE-201ENST00000427391 TSPYL6Q8N831 410 aa14.83□□□□□ -0.04
FIRRE-201ENST00000427391 RWDD1Q9H446 243 aaPredicted RBP14.83□□□□□ -0.04
FIRRE-201ENST00000427391 DLC1Q96QB1 1528 aa14.83□□□□□ -0.04
FIRRE-201ENST00000427391 ATP7BP35670 1465 aa14.83□□□□□ -0.04
FIRRE-201ENST00000427391 FAM83GA6ND36 823 aa14.82□□□□□ -0.04
FIRRE-201ENST00000427391 SOX12O15370 315 aa14.82□□□□□ -0.04
FIRRE-201ENST00000427391 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
FIRRE-201ENST00000427391 CPSF1Q10570 1443 aaKnown RBP14.82□□□□□ -0.04
FIRRE-201ENST00000427391 IL13P35225 146 aa14.82□□□□□ -0.04
FIRRE-201ENST00000427391 DCTN1Q14203 1278 aa14.82□□□□□ -0.04
FIRRE-201ENST00000427391 FAM135BQ49AJ0 1406 aa14.81□□□□□ -0.04
FIRRE-201ENST00000427391 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
FIRRE-201ENST00000427391 ROBO2Q9HCK4 1378 aa14.81□□□□□ -0.04
FIRRE-201ENST00000427391 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.81□□□□□ -0.04
FIRRE-201ENST00000427391 SLC26A8Q96RN1 970 aa14.81□□□□□ -0.04
FIRRE-201ENST00000427391 IL16Q14005 1332 aa14.81□□□□□ -0.04
FIRRE-201ENST00000427391 LTKP29376 864 aa14.8□□□□□ -0.04
FIRRE-201ENST00000427391 NFE2L2Q16236 605 aa14.8□□□□□ -0.04
FIRRE-201ENST00000427391 COG3Q96JB2 828 aa14.8□□□□□ -0.04
FIRRE-201ENST00000427391 TNRQ92752 1358 aa14.8□□□□□ -0.04
FIRRE-201ENST00000427391 EDC4Q6P2E9 1401 aaKnown RBP14.8□□□□□ -0.04
FIRRE-201ENST00000427391 CT47B1P0C2W7 299 aaPredicted RBP14.8□□□□□ -0.04
FIRRE-201ENST00000427391 NFKBIBQ15653 356 aa14.79□□□□□ -0.04
FIRRE-201ENST00000427391 AEBP1Q8IUX7 1158 aa14.79□□□□□ -0.04
FIRRE-201ENST00000427391 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
FIRRE-201ENST00000427391 C1orf115Q9H7X2 142 aa14.78□□□□□ -0.04
FIRRE-201ENST00000427391 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
FIRRE-201ENST00000427391 TMEM2Q9UHN6 1383 aa14.77□□□□□ -0.05
FIRRE-201ENST00000427391 MBIPQ9NS73 344 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms