RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
ERCC3-202ENST00000426778 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
ERCC3-202ENST00000426778 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
ERCC3-202ENST00000426778 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
ERCC3-202ENST00000426778 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
ERCC3-202ENST00000426778 ABCC3O15438 1527 aa18.22■□□□□ 0.51
ERCC3-202ENST00000426778 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
ERCC3-202ENST00000426778 C22orf23Q9BZE7 217 aa18.22■□□□□ 0.51
ERCC3-202ENST00000426778 RPGRIP1LQ68CZ1 1315 aa18.21■□□□□ 0.51
ERCC3-202ENST00000426778 ARHGEF28Q8N1W1 1705 aaKnown RBP18.21■□□□□ 0.51
ERCC3-202ENST00000426778 DIAPH1O60610 1272 aaKnown RBP18.2■□□□□ 0.5
ERCC3-202ENST00000426778 WAPLQ7Z5K2 1190 aa18.2■□□□□ 0.5
ERCC3-202ENST00000426778 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
ERCC3-202ENST00000426778 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
ERCC3-202ENST00000426778 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
ERCC3-202ENST00000426778 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
ERCC3-202ENST00000426778 ABCC11Q96J66 1382 aa18.18■□□□□ 0.5
ERCC3-202ENST00000426778 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
ERCC3-202ENST00000426778 STAG3Q9UJ98 1225 aa18.18■□□□□ 0.5
ERCC3-202ENST00000426778 TERF2IPQ9NYB0 399 aa18.17■□□□□ 0.5
ERCC3-202ENST00000426778 NEXMIFQ5QGS0 1516 aa18.17■□□□□ 0.5
ERCC3-202ENST00000426778 ZRANB1Q9UGI0 708 aa18.17■□□□□ 0.5
ERCC3-202ENST00000426778 EIF5BO60841 1220 aaKnown RBP18.16■□□□□ 0.5
ERCC3-202ENST00000426778 TSPYL6Q8N831 410 aa18.16■□□□□ 0.5
ERCC3-202ENST00000426778 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
ERCC3-202ENST00000426778 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
ERCC3-202ENST00000426778 ZBTB40Q9NUA8 1239 aa18.15■□□□□ 0.5
ERCC3-202ENST00000426778 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
ERCC3-202ENST00000426778 NCKAP5LQ9HCH0 1330 aa18.15■□□□□ 0.5
ERCC3-202ENST00000426778 YEATS2Q9ULM3 1422 aa18.14■□□□□ 0.5
ERCC3-202ENST00000426778 NSD2O96028 1365 aa18.14■□□□□ 0.49
ERCC3-202ENST00000426778 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.49
ERCC3-202ENST00000426778 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
ERCC3-202ENST00000426778 AAMPQ13685 434 aa18.13■□□□□ 0.49
ERCC3-202ENST00000426778 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
ERCC3-202ENST00000426778 HDAC1Q13547 482 aaPredicted RBP18.12■□□□□ 0.49
ERCC3-202ENST00000426778 ANKRD45Q5TZF3 282 aa18.12■□□□□ 0.49
ERCC3-202ENST00000426778 USP32Q8NFA0 1604 aa18.12■□□□□ 0.49
ERCC3-202ENST00000426778 MLECQ14165 292 aa18.12■□□□□ 0.49
ERCC3-202ENST00000426778 PANK2Q9BZ23 570 aa18.12■□□□□ 0.49
ERCC3-202ENST00000426778 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
ERCC3-202ENST00000426778 DCTN1Q14203 1278 aa18.12■□□□□ 0.49
ERCC3-202ENST00000426778 SMC5Q8IY18 1101 aa18.12■□□□□ 0.49
ERCC3-202ENST00000426778 CD163L1Q9NR16 1453 aa18.11■□□□□ 0.49
ERCC3-202ENST00000426778 FAM83GA6ND36 823 aa18.11■□□□□ 0.49
ERCC3-202ENST00000426778 POLKQ9UBT6 870 aa18.11■□□□□ 0.49
ERCC3-202ENST00000426778 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
ERCC3-202ENST00000426778 MCM4P33991 863 aa18.1■□□□□ 0.49
ERCC3-202ENST00000426778 PIK3C2BO00750 1634 aa18.1■□□□□ 0.49
ERCC3-202ENST00000426778 RRS1Q15050 365 aaKnown RBP18.09■□□□□ 0.49
ERCC3-202ENST00000426778 YTHDC2Q9H6S0 1430 aaKnown RBP18.09■□□□□ 0.49
ERCC3-202ENST00000426778 PTPRMP28827 1452 aa18.09■□□□□ 0.49
ERCC3-202ENST00000426778 NME9Q86XW9 330 aa18.09■□□□□ 0.49
ERCC3-202ENST00000426778 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
ERCC3-202ENST00000426778 RSPH6AQ9H0K4 717 aa18.09■□□□□ 0.49
ERCC3-202ENST00000426778 CHD1LQ86WJ1 897 aa18.08■□□□□ 0.49
ERCC3-202ENST00000426778 HSCBQ8IWL3 235 aa18.08■□□□□ 0.49
ERCC3-202ENST00000426778 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.48
ERCC3-202ENST00000426778 OSCARQ8IYS5 282 aa18.08■□□□□ 0.48
ERCC3-202ENST00000426778 KIF16BQ96L93 1317 aa18.07■□□□□ 0.48
ERCC3-202ENST00000426778 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
ERCC3-202ENST00000426778 CD2BP2O95400 341 aaKnown RBP18.07■□□□□ 0.48
ERCC3-202ENST00000426778 NUCB1Q02818 461 aa18.07■□□□□ 0.48
ERCC3-202ENST00000426778 SLC52A1Q9NWF4 448 aa18.07■□□□□ 0.48
ERCC3-202ENST00000426778 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
ERCC3-202ENST00000426778 XRCC6P12956 609 aaKnown RBP eCLIP18.06■□□□□ 0.48
ERCC3-202ENST00000426778 RRAGDQ9NQL2 400 aaPredicted RBP18.06■□□□□ 0.48
ERCC3-202ENST00000426778 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
ERCC3-202ENST00000426778 APBB1O00213 710 aa18.05■□□□□ 0.48
ERCC3-202ENST00000426778 LRRC7Q96NW7 1537 aa18.05■□□□□ 0.48
ERCC3-202ENST00000426778 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
ERCC3-202ENST00000426778 SOX12O15370 315 aa18.05■□□□□ 0.48
ERCC3-202ENST00000426778 TRAK2O60296 914 aa18.05■□□□□ 0.48
ERCC3-202ENST00000426778 KRT24Q2M2I5 525 aa18.05■□□□□ 0.48
ERCC3-202ENST00000426778 VAMP4O75379 141 aa18.04■□□□□ 0.48
ERCC3-202ENST00000426778 FCHSD2O94868 740 aa18.04■□□□□ 0.48
ERCC3-202ENST00000426778 MBIPQ9NS73 344 aa18.04■□□□□ 0.48
ERCC3-202ENST00000426778 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
ERCC3-202ENST00000426778 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
ERCC3-202ENST00000426778 ZBTB7BO15156 539 aaPredicted RBP18.03■□□□□ 0.48
ERCC3-202ENST00000426778 SIRT2Q8IXJ6 389 aa18.03■□□□□ 0.48
ERCC3-202ENST00000426778 IL16Q14005 1332 aa18.03■□□□□ 0.48
ERCC3-202ENST00000426778 GOLGA6L3A6NEY3 463 aa18.02■□□□□ 0.48
ERCC3-202ENST00000426778 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
ERCC3-202ENST00000426778 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.48
ERCC3-202ENST00000426778 MRPL50Q8N5N7 158 aaKnown RBP18.02■□□□□ 0.48
ERCC3-202ENST00000426778 NFE2L2Q16236 605 aa18.02■□□□□ 0.47
ERCC3-202ENST00000426778 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.47
ERCC3-202ENST00000426778 HSP90AA1P07900 732 aaKnown RBP18.01■□□□□ 0.47
ERCC3-202ENST00000426778 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
ERCC3-202ENST00000426778 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
ERCC3-202ENST00000426778 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
ERCC3-202ENST00000426778 ALDH1L2Q3SY69 923 aa17.99■□□□□ 0.47
ERCC3-202ENST00000426778 TBC1D9Q6ZT07 1266 aa17.99■□□□□ 0.47
ERCC3-202ENST00000426778 C16orf71Q8IYS4 520 aaPredicted RBP17.99■□□□□ 0.47
ERCC3-202ENST00000426778 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
ERCC3-202ENST00000426778 ZMYM3Q14202 1370 aa17.99■□□□□ 0.47
ERCC3-202ENST00000426778 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
ERCC3-202ENST00000426778 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
ERCC3-202ENST00000426778 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms