RNA–Protein interactions for RNA: ENST00000425118.5

AUP1-202, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 1 (best)

Gene AUP1, Length 1,581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-202ENST00000425118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.74■■□□□ 1.39
AUP1-202ENST00000425118 ZNF692Q9BU19 519 aaPredicted RBP23.74■■□□□ 1.39
AUP1-202ENST00000425118 ARHGEF10O15013 1369 aa23.73■■□□□ 1.39
AUP1-202ENST00000425118 USP6P35125 1406 aa23.72■■□□□ 1.39
AUP1-202ENST00000425118 KTN1Q86UP2 1357 aaKnown RBP23.72■■□□□ 1.39
AUP1-202ENST00000425118 CDCA8Q53HL2 280 aa23.72■■□□□ 1.39
AUP1-202ENST00000425118 PUS7Q96PZ0 661 aaKnown RBP23.72■■□□□ 1.39
AUP1-202ENST00000425118 C11orf95C9JLR9 678 aaPredicted RBP23.71■■□□□ 1.39
AUP1-202ENST00000425118 HDGFL2Q7Z4V5 671 aaPredicted RBP23.71■■□□□ 1.39
AUP1-202ENST00000425118 NGLY1Q96IV0 654 aa23.71■■□□□ 1.39
AUP1-202ENST00000425118 RGS17Q9UGC6 210 aaPredicted RBP23.71■■□□□ 1.39
AUP1-202ENST00000425118 TRPM3Q9HCF6 1732 aaPredicted RBP23.7■■□□□ 1.38
AUP1-202ENST00000425118 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
AUP1-202ENST00000425118 CPSF1Q10570 1443 aaKnown RBP23.69■■□□□ 1.38
AUP1-202ENST00000425118 TTC21BQ7Z4L5 1316 aa23.68■■□□□ 1.38
AUP1-202ENST00000425118 NLRP6P59044 892 aa23.68■■□□□ 1.38
AUP1-202ENST00000425118 A0A1W2PP64 1363 aa23.68■■□□□ 1.38
AUP1-202ENST00000425118 CD163L1Q9NR16 1453 aa23.67■■□□□ 1.38
AUP1-202ENST00000425118 ZRANB1Q9UGI0 708 aa23.66■■□□□ 1.38
AUP1-202ENST00000425118 AFF2P51816 1311 aa23.66■■□□□ 1.38
AUP1-202ENST00000425118 SOX12O15370 315 aa23.65■■□□□ 1.38
AUP1-202ENST00000425118 COL22A1Q8NFW1 1626 aaPredicted RBP23.65■■□□□ 1.38
AUP1-202ENST00000425118 ZC3H6P61129 1189 aaKnown RBP23.65■■□□□ 1.38
AUP1-202ENST00000425118 NLRP13Q86W25 1043 aa23.64■■□□□ 1.37
AUP1-202ENST00000425118 NME9Q86XW9 330 aa23.64■■□□□ 1.37
AUP1-202ENST00000425118 ALS2Q96Q42 1657 aa23.64■■□□□ 1.37
AUP1-202ENST00000425118 SSH2Q76I76 1423 aa23.63■■□□□ 1.37
AUP1-202ENST00000425118 POTEAQ6S8J7 498 aa23.63■■□□□ 1.37
AUP1-202ENST00000425118 ZBTB7CA1YPR0 619 aa23.62■■□□□ 1.37
AUP1-202ENST00000425118 FAM83GA6ND36 823 aa23.61■■□□□ 1.37
AUP1-202ENST00000425118 NINLQ9Y2I6 1382 aa23.6■■□□□ 1.37
AUP1-202ENST00000425118 CHRNA2Q15822 529 aa23.6■■□□□ 1.37
AUP1-202ENST00000425118 USP21Q9UK80 565 aa23.6■■□□□ 1.37
AUP1-202ENST00000425118 GCP02774 474 aa23.59■■□□□ 1.37
AUP1-202ENST00000425118 ILDR2Q71H61 639 aa23.59■■□□□ 1.37
AUP1-202ENST00000425118 BRD4O60885 1362 aaPredicted RBP23.59■■□□□ 1.37
AUP1-202ENST00000425118 ANKRD36BQ8N2N9 1353 aa23.59■■□□□ 1.37
AUP1-202ENST00000425118 AKAP12Q02952 1782 aa23.59■■□□□ 1.37
AUP1-202ENST00000425118 ZNF772Q68DY9 489 aaPredicted RBP23.58■■□□□ 1.37
AUP1-202ENST00000425118 TTC21AQ8NDW8 1320 aa23.58■■□□□ 1.37
AUP1-202ENST00000425118 CARD14Q9BXL6 1004 aa23.57■■□□□ 1.36
AUP1-202ENST00000425118 KIF7Q2M1P5 1343 aa23.57■■□□□ 1.36
AUP1-202ENST00000425118 PRDM11Q9NQV5 511 aa23.57■■□□□ 1.36
AUP1-202ENST00000425118 EDC4Q6P2E9 1401 aaKnown RBP23.56■■□□□ 1.36
AUP1-202ENST00000425118 FNBP4Q8N3X1 1017 aaPredicted RBP23.56■■□□□ 1.36
AUP1-202ENST00000425118 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
AUP1-202ENST00000425118 QTRT2Q9H974 415 aaKnown RBP23.55■■□□□ 1.36
AUP1-202ENST00000425118 USP19O94966 1318 aa23.55■■□□□ 1.36
AUP1-202ENST00000425118 PANK3Q9H999 370 aa23.54■■□□□ 1.36
AUP1-202ENST00000425118 PIK3C2AO00443 1686 aa23.53■■□□□ 1.36
AUP1-202ENST00000425118 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
AUP1-202ENST00000425118 BTG4Q9NY30 223 aa23.53■■□□□ 1.36
AUP1-202ENST00000425118 MON2Q7Z3U7 1717 aa23.53■■□□□ 1.36
AUP1-202ENST00000425118 ABCA3Q99758 1704 aa23.51■■□□□ 1.35
AUP1-202ENST00000425118 NRKQ7Z2Y5 1582 aa23.51■■□□□ 1.35
AUP1-202ENST00000425118 ZEB1P37275 1124 aaPredicted RBP23.51■■□□□ 1.35
AUP1-202ENST00000425118 FYB1O15117 783 aa23.5■■□□□ 1.35
AUP1-202ENST00000425118 FBLN1P23142 703 aa23.5■■□□□ 1.35
AUP1-202ENST00000425118 UNC5CLQ8IV45 518 aa23.5■■□□□ 1.35
AUP1-202ENST00000425118 MYOM1P52179 1685 aa23.5■■□□□ 1.35
AUP1-202ENST00000425118 WASHC2AQ641Q2 1341 aa23.49■■□□□ 1.35
AUP1-202ENST00000425118 CCDC9Q9Y3X0 531 aaKnown RBP23.49■■□□□ 1.35
AUP1-202ENST00000425118 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
AUP1-202ENST00000425118 NSD3Q9BZ95 1437 aa23.49■■□□□ 1.35
AUP1-202ENST00000425118 COG3Q96JB2 828 aa23.48■■□□□ 1.35
AUP1-202ENST00000425118 KCNH5Q8NCM2 988 aa23.48■■□□□ 1.35
AUP1-202ENST00000425118 STRN4Q9NRL3 753 aa23.48■■□□□ 1.35
AUP1-202ENST00000425118 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
AUP1-202ENST00000425118 PHRF1Q9P1Y6 1649 aaKnown RBP23.47■■□□□ 1.35
AUP1-202ENST00000425118 RXRBP28702 533 aa23.47■■□□□ 1.35
AUP1-202ENST00000425118 TRPC5Q9UL62 973 aaPredicted RBP23.47■■□□□ 1.35
AUP1-202ENST00000425118 MARF1Q9Y4F3 1742 aaKnown RBP23.46■■□□□ 1.35
AUP1-202ENST00000425118 SLIT2O94813 1529 aa23.46■■□□□ 1.35
AUP1-202ENST00000425118 USP31Q70CQ4 1352 aa23.46■■□□□ 1.35
AUP1-202ENST00000425118 CCDC7Q96M83 1385 aa23.46■■□□□ 1.35
AUP1-202ENST00000425118 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
AUP1-202ENST00000425118 EVA1CP58658 441 aa23.44■■□□□ 1.34
AUP1-202ENST00000425118 ARHGEF25Q86VW2 580 aa23.42■■□□□ 1.34
AUP1-202ENST00000425118 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
AUP1-202ENST00000425118 SLIT3O75094 1523 aa23.42■■□□□ 1.34
AUP1-202ENST00000425118 CPDO75976 1380 aa23.41■■□□□ 1.34
AUP1-202ENST00000425118 RBM6P78332 1123 aaKnown RBP23.41■■□□□ 1.34
AUP1-202ENST00000425118 GJD4Q96KN9 370 aaPredicted RBP23.41■■□□□ 1.34
AUP1-202ENST00000425118 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
AUP1-202ENST00000425118 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
AUP1-202ENST00000425118 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
AUP1-202ENST00000425118 CGNL1Q0VF96 1302 aa23.41■■□□□ 1.34
AUP1-202ENST00000425118 TNNT2P45379 298 aaPredicted RBP23.4■■□□□ 1.34
AUP1-202ENST00000425118 ATRNO75882 1429 aa23.39■■□□□ 1.33
AUP1-202ENST00000425118 RRS1Q15050 365 aaKnown RBP23.39■■□□□ 1.33
AUP1-202ENST00000425118 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
AUP1-202ENST00000425118 PLCH1Q4KWH8 1693 aa23.39■■□□□ 1.33
AUP1-202ENST00000425118 COL14A1Q05707 1796 aaKnown RBP23.38■■□□□ 1.33
AUP1-202ENST00000425118 VPS72Q15906 364 aa23.38■■□□□ 1.33
AUP1-202ENST00000425118 LARP1Q6PKG0 1096 aaKnown RBP23.38■■□□□ 1.33
AUP1-202ENST00000425118 CAMTA1Q9Y6Y1 1673 aa23.37■■□□□ 1.33
AUP1-202ENST00000425118 NFAT5O94916 1531 aa23.36■■□□□ 1.33
AUP1-202ENST00000425118 AATKQ6ZMQ8 1374 aa23.35■■□□□ 1.33
AUP1-202ENST00000425118 A0A0G2JS52 829 aa23.35■■□□□ 1.33
AUP1-202ENST00000425118 MYT1Q01538 1121 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms