RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 TNS3Q68CZ2 1445 aa16.38■□□□□ 0.21
LMO3-206ENST00000424192 FOXO3O43524 673 aa16.38■□□□□ 0.21
LMO3-206ENST00000424192 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
LMO3-206ENST00000424192 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
LMO3-206ENST00000424192 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
LMO3-206ENST00000424192 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
LMO3-206ENST00000424192 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
LMO3-206ENST00000424192 ARHGEF10O15013 1369 aa16.37■□□□□ 0.21
LMO3-206ENST00000424192 ZEB1P37275 1124 aaPredicted RBP16.36■□□□□ 0.21
LMO3-206ENST00000424192 PMFBP1Q8TBY8 1022 aa16.35■□□□□ 0.21
LMO3-206ENST00000424192 TRPM3Q9HCF6 1732 aaPredicted RBP16.35■□□□□ 0.21
LMO3-206ENST00000424192 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
LMO3-206ENST00000424192 KRT28Q7Z3Y7 464 aa16.34■□□□□ 0.21
LMO3-206ENST00000424192 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
LMO3-206ENST00000424192 DDX17Q92841 729 aaKnown RBP16.33■□□□□ 0.2
LMO3-206ENST00000424192 ACEP12821 1306 aa16.33■□□□□ 0.2
LMO3-206ENST00000424192 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.2
LMO3-206ENST00000424192 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
LMO3-206ENST00000424192 USP6P35125 1406 aa16.32■□□□□ 0.2
LMO3-206ENST00000424192 AKAP12Q02952 1782 aa16.32■□□□□ 0.2
LMO3-206ENST00000424192 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
LMO3-206ENST00000424192 ALS2Q96Q42 1657 aa16.32■□□□□ 0.2
LMO3-206ENST00000424192 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
LMO3-206ENST00000424192 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
LMO3-206ENST00000424192 CPSF1Q10570 1443 aaKnown RBP16.3■□□□□ 0.2
LMO3-206ENST00000424192 ZNF692Q9BU19 519 aaPredicted RBP16.3■□□□□ 0.2
LMO3-206ENST00000424192 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
LMO3-206ENST00000424192 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
LMO3-206ENST00000424192 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
LMO3-206ENST00000424192 HDGFL2Q7Z4V5 671 aaPredicted RBP16.29■□□□□ 0.2
LMO3-206ENST00000424192 MYOM1P52179 1685 aa16.27■□□□□ 0.2
LMO3-206ENST00000424192 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
LMO3-206ENST00000424192 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.2
LMO3-206ENST00000424192 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
LMO3-206ENST00000424192 EDC4Q6P2E9 1401 aaKnown RBP16.27■□□□□ 0.19
LMO3-206ENST00000424192 TTC21AQ8NDW8 1320 aa16.26■□□□□ 0.19
LMO3-206ENST00000424192 ABCA3Q99758 1704 aa16.26■□□□□ 0.19
LMO3-206ENST00000424192 CD163L1Q9NR16 1453 aa16.26■□□□□ 0.19
LMO3-206ENST00000424192 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
LMO3-206ENST00000424192 LRP6O75581 1613 aa16.25■□□□□ 0.19
LMO3-206ENST00000424192 SSH2Q76I76 1423 aa16.25■□□□□ 0.19
LMO3-206ENST00000424192 A0A1W2PP64 1363 aa16.25■□□□□ 0.19
LMO3-206ENST00000424192 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
LMO3-206ENST00000424192 LMOD2Q6P5Q4 547 aa16.23■□□□□ 0.19
LMO3-206ENST00000424192 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
LMO3-206ENST00000424192 CRYBG1Q9Y4K1 1723 aa16.22■□□□□ 0.19
LMO3-206ENST00000424192 PIK3C2AO00443 1686 aa16.22■□□□□ 0.19
LMO3-206ENST00000424192 USP54Q70EL1 1684 aa16.22■□□□□ 0.19
LMO3-206ENST00000424192 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
LMO3-206ENST00000424192 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
LMO3-206ENST00000424192 SLC12A5Q9H2X9 1139 aa16.21■□□□□ 0.19
LMO3-206ENST00000424192 TTC21BQ7Z4L5 1316 aa16.2■□□□□ 0.18
LMO3-206ENST00000424192 MKRN4PQ13434 485 aaPredicted RBP16.2■□□□□ 0.18
LMO3-206ENST00000424192 USP19O94966 1318 aa16.19■□□□□ 0.18
LMO3-206ENST00000424192 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
LMO3-206ENST00000424192 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
LMO3-206ENST00000424192 NLRP13Q86W25 1043 aa16.19■□□□□ 0.18
LMO3-206ENST00000424192 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
LMO3-206ENST00000424192 ABTB2Q8N961 1025 aa16.19■□□□□ 0.18
LMO3-206ENST00000424192 SLIT3O75094 1523 aa16.19■□□□□ 0.18
LMO3-206ENST00000424192 USP31Q70CQ4 1352 aa16.17■□□□□ 0.18
LMO3-206ENST00000424192 KIF7Q2M1P5 1343 aa16.17■□□□□ 0.18
LMO3-206ENST00000424192 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
LMO3-206ENST00000424192 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
LMO3-206ENST00000424192 COL14A1Q05707 1796 aaKnown RBP16.15■□□□□ 0.18
LMO3-206ENST00000424192 KIF20BQ96Q89 1820 aa16.15■□□□□ 0.18
LMO3-206ENST00000424192 CCDC7Q96M83 1385 aa16.14■□□□□ 0.17
LMO3-206ENST00000424192 NWD2Q9ULI1 1742 aa16.14■□□□□ 0.17
LMO3-206ENST00000424192 OVOS2A0A0J9YW53 1432 aa16.14■□□□□ 0.17
LMO3-206ENST00000424192 OVOS2Q6IE36 1432 aa16.14■□□□□ 0.17
LMO3-206ENST00000424192 NLRP6P59044 892 aa16.14■□□□□ 0.17
LMO3-206ENST00000424192 KCNH5Q8NCM2 988 aa16.14■□□□□ 0.17
LMO3-206ENST00000424192 ABCC6O95255 1503 aa16.14■□□□□ 0.17
LMO3-206ENST00000424192 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
LMO3-206ENST00000424192 CPDO75976 1380 aa16.13■□□□□ 0.17
LMO3-206ENST00000424192 ADAMTS2O95450 1211 aa16.13■□□□□ 0.17
LMO3-206ENST00000424192 ZNF772Q68DY9 489 aaPredicted RBP16.13■□□□□ 0.17
LMO3-206ENST00000424192 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
LMO3-206ENST00000424192 PLCH1Q4KWH8 1693 aa16.13■□□□□ 0.17
LMO3-206ENST00000424192 C8orf37Q96NL8 207 aa16.12■□□□□ 0.17
LMO3-206ENST00000424192 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
LMO3-206ENST00000424192 NSD2O96028 1365 aa16.12■□□□□ 0.17
LMO3-206ENST00000424192 SLIT2O94813 1529 aa16.11■□□□□ 0.17
LMO3-206ENST00000424192 CABLES1Q8TDN4 633 aa16.11■□□□□ 0.17
LMO3-206ENST00000424192 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
LMO3-206ENST00000424192 NFAT5O94916 1531 aa16.1■□□□□ 0.17
LMO3-206ENST00000424192 GCP02774 474 aa16.1■□□□□ 0.17
LMO3-206ENST00000424192 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
LMO3-206ENST00000424192 PRDM11Q9NQV5 511 aa16.1■□□□□ 0.17
LMO3-206ENST00000424192 ZBTB12Q9Y330 459 aaPredicted RBP16.1■□□□□ 0.17
LMO3-206ENST00000424192 AFF2P51816 1311 aa16.1■□□□□ 0.17
LMO3-206ENST00000424192 C11orf95C9JLR9 678 aaPredicted RBP16.09■□□□□ 0.17
LMO3-206ENST00000424192 NME9Q86XW9 330 aa16.09■□□□□ 0.17
LMO3-206ENST00000424192 FNBP4Q8N3X1 1017 aaPredicted RBP16.09■□□□□ 0.17
LMO3-206ENST00000424192 COG3Q96JB2 828 aa16.09■□□□□ 0.17
LMO3-206ENST00000424192 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
LMO3-206ENST00000424192 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
LMO3-206ENST00000424192 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
LMO3-206ENST00000424192 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
LMO3-206ENST00000424192 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms