RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 BMP1P13497 986 aa10.78□□□□□ -0.68
LINC00458-201ENST00000423442 BAP1Q92560 729 aa10.78□□□□□ -0.68
LINC00458-201ENST00000423442 KIFC2Q96AC6 838 aa10.78□□□□□ -0.68
LINC00458-201ENST00000423442 BEGAINQ9BUH8 593 aa10.78□□□□□ -0.68
LINC00458-201ENST00000423442 WASF2Q9Y6W5 498 aa10.78□□□□□ -0.68
LINC00458-201ENST00000423442 ATAD2BQ9ULI0 1458 aa10.78□□□□□ -0.68
LINC00458-201ENST00000423442 KCNH2Q12809 1159 aa10.77□□□□□ -0.69
LINC00458-201ENST00000423442 MTMR2Q13614 643 aa10.77□□□□□ -0.69
LINC00458-201ENST00000423442 TRIM46Q7Z4K8 759 aa10.76□□□□□ -0.69
LINC00458-201ENST00000423442 THOC2Q8NI27 1593 aaKnown RBP10.76□□□□□ -0.69
LINC00458-201ENST00000423442 CAPN5O15484 640 aaPredicted RBP10.75□□□□□ -0.69
LINC00458-201ENST00000423442 TLL2Q9Y6L7 1015 aa10.75□□□□□ -0.69
LINC00458-201ENST00000423442 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
LINC00458-201ENST00000423442 ZNF511Q8NB15 262 aa10.73□□□□□ -0.69
LINC00458-201ENST00000423442 PCDHB15Q9Y5E8 787 aa10.73□□□□□ -0.69
LINC00458-201ENST00000423442 SPDYE5A6NIY4 337 aa10.72□□□□□ -0.69
LINC00458-201ENST00000423442 DESI1Q6ICB0 168 aa10.72□□□□□ -0.69
LINC00458-201ENST00000423442 RSBN1LQ6PCB5 846 aaPredicted RBP10.72□□□□□ -0.69
LINC00458-201ENST00000423442 PARP9Q8IXQ6 854 aa10.72□□□□□ -0.69
LINC00458-201ENST00000423442 HMGXB3Q12766 1538 aa10.72□□□□□ -0.69
LINC00458-201ENST00000423442 SMARCA2P51531 1590 aa10.71□□□□□ -0.69
LINC00458-201ENST00000423442 CFAP99D6REC4 459 aa10.7□□□□□ -0.7
LINC00458-201ENST00000423442 CTHP32929 405 aa10.69□□□□□ -0.7
LINC00458-201ENST00000423442 LYPD8Q6UX82 237 aa10.69□□□□□ -0.7
LINC00458-201ENST00000423442 TRIM66O15016 1216 aa10.68□□□□□ -0.7
LINC00458-201ENST00000423442 VARSP26640 1264 aaKnown RBP10.68□□□□□ -0.7
LINC00458-201ENST00000423442 SMARCA4P51532 1647 aa10.68□□□□□ -0.7
LINC00458-201ENST00000423442 GJA5P36382 358 aa10.67□□□□□ -0.7
LINC00458-201ENST00000423442 NNTQ13423 1086 aa10.67□□□□□ -0.7
LINC00458-201ENST00000423442 NXF1Q9UBU9 619 aaKnown RBP10.67□□□□□ -0.7
LINC00458-201ENST00000423442 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 LAMC3Q9Y6N6 1575 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 SPTLC1O15269 473 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 HRCP23327 699 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 VEGFBP49765 207 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 SLC16A10Q8TF71 515 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 ZFP42Q96MM3 310 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 MAP10Q9P2G4 905 aa10.66□□□□□ -0.7
LINC00458-201ENST00000423442 PLEKHG3A1L390 1219 aa10.65□□□□□ -0.7
LINC00458-201ENST00000423442 DIXDC1Q155Q3 683 aa10.65□□□□□ -0.7
LINC00458-201ENST00000423442 FOXJ1Q92949 421 aa10.65□□□□□ -0.7
LINC00458-201ENST00000423442 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
LINC00458-201ENST00000423442 CSPP1Q1MSJ5 1256 aa10.64□□□□□ -0.71
LINC00458-201ENST00000423442 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
LINC00458-201ENST00000423442 MPNDQ8N594 471 aa10.64□□□□□ -0.71
LINC00458-201ENST00000423442 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
LINC00458-201ENST00000423442 F12P00748 615 aaPredicted RBP10.63□□□□□ -0.71
LINC00458-201ENST00000423442 TIMP2P16035 220 aa10.62□□□□□ -0.71
LINC00458-201ENST00000423442 WDR4P57081 412 aaKnown RBP10.62□□□□□ -0.71
LINC00458-201ENST00000423442 NPAS3Q8IXF0 933 aa10.62□□□□□ -0.71
LINC00458-201ENST00000423442 AK7Q96M32 723 aa10.62□□□□□ -0.71
LINC00458-201ENST00000423442 PDS5BQ9NTI5 1447 aa10.61□□□□□ -0.71
LINC00458-201ENST00000423442 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
LINC00458-201ENST00000423442 GMPRP36959 345 aa10.61□□□□□ -0.71
LINC00458-201ENST00000423442 FAM174AQ8TBP5 190 aa10.61□□□□□ -0.71
LINC00458-201ENST00000423442 ARID5BQ14865 1188 aa10.6□□□□□ -0.71
LINC00458-201ENST00000423442 MRPL14Q6P1L8 145 aaKnown RBP10.6□□□□□ -0.71
LINC00458-201ENST00000423442 PURBQ96QR8 312 aaKnown RBP10.6□□□□□ -0.71
LINC00458-201ENST00000423442 KLF16Q9BXK1 252 aaPredicted RBP10.6□□□□□ -0.71
LINC00458-201ENST00000423442 FAM181BA6NEQ2 426 aa10.59□□□□□ -0.71
LINC00458-201ENST00000423442 ADH1CP00326 375 aa10.59□□□□□ -0.71
LINC00458-201ENST00000423442 C4orf48Q5BLP8 95 aa10.59□□□□□ -0.71
LINC00458-201ENST00000423442 PRPF38BQ5VTL8 546 aaKnown RBP10.59□□□□□ -0.71
LINC00458-201ENST00000423442 IRF7Q92985 503 aa10.59□□□□□ -0.71
LINC00458-201ENST00000423442 LIMD1Q9UGP4 676 aa10.59□□□□□ -0.71
LINC00458-201ENST00000423442 LORP23490 312 aaPredicted RBP10.58□□□□□ -0.72
LINC00458-201ENST00000423442 QPCTQ16769 361 aa10.58□□□□□ -0.72
LINC00458-201ENST00000423442 TSC1Q92574 1164 aa10.58□□□□□ -0.72
LINC00458-201ENST00000423442 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
LINC00458-201ENST00000423442 SOBPA7XYQ1 873 aa10.57□□□□□ -0.72
LINC00458-201ENST00000423442 H3BM21 787 aa10.57□□□□□ -0.72
LINC00458-201ENST00000423442 AGERQ15109 404 aa10.57□□□□□ -0.72
LINC00458-201ENST00000423442 CDK15Q96Q40 435 aa10.57□□□□□ -0.72
LINC00458-201ENST00000423442 ERBB4Q15303 1308 aa10.57□□□□□ -0.72
LINC00458-201ENST00000423442 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
LINC00458-201ENST00000423442 NR3C2P08235 984 aa10.56□□□□□ -0.72
LINC00458-201ENST00000423442 SCARF1Q14162 830 aa10.56□□□□□ -0.72
LINC00458-201ENST00000423442 MYSM1Q5VVJ2 828 aa10.56□□□□□ -0.72
LINC00458-201ENST00000423442 ZSCAN1Q8NBB4 408 aa10.56□□□□□ -0.72
LINC00458-201ENST00000423442 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
LINC00458-201ENST00000423442 NUTM2BA6NNL0 878 aaPredicted RBP10.55□□□□□ -0.72
LINC00458-201ENST00000423442 NUTM2EB1AL46 878 aaPredicted RBP10.55□□□□□ -0.72
LINC00458-201ENST00000423442 PDE4DQ08499 809 aa10.55□□□□□ -0.72
LINC00458-201ENST00000423442 NUTM2DQ5VT03 806 aaPredicted RBP10.55□□□□□ -0.72
LINC00458-201ENST00000423442 NUTM2AQ8IVF1 878 aaPredicted RBP10.55□□□□□ -0.72
LINC00458-201ENST00000423442 ZIC2O95409 532 aaPredicted RBP10.54□□□□□ -0.72
LINC00458-201ENST00000423442 GRM5P41594 1212 aa10.54□□□□□ -0.72
LINC00458-201ENST00000423442 ITPKCQ96DU7 683 aa10.54□□□□□ -0.72
LINC00458-201ENST00000423442 MRC2Q9UBG0 1479 aa10.54□□□□□ -0.72
LINC00458-201ENST00000423442 LILRB3O75022 631 aa10.52□□□□□ -0.73
LINC00458-201ENST00000423442 BPHLQ86WA6 291 aaPredicted RBP10.52□□□□□ -0.73
LINC00458-201ENST00000423442 WDR62O43379 1518 aa10.52□□□□□ -0.73
LINC00458-201ENST00000423442 NR5A1Q13285 461 aa10.51□□□□□ -0.73
LINC00458-201ENST00000423442 RTL5Q5HYW3 569 aaPredicted RBP10.51□□□□□ -0.73
LINC00458-201ENST00000423442 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
LINC00458-201ENST00000423442 CADPSQ9ULU8 1353 aa10.51□□□□□ -0.73
LINC00458-201ENST00000423442 SLC24A3Q9HC58 644 aa10.5□□□□□ -0.73
LINC00458-201ENST00000423442 MROH2BQ7Z745 1585 aa10.49□□□□□ -0.73
LINC00458-201ENST00000423442 TUSC1Q2TAM9 212 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms