RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 ACEP12821 1306 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 SBNO1A3KN83 1393 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.2
ECHDC3-203ENST00000422887 PLCH1Q4KWH8 1693 aa13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 NRAPQ86VF7 1730 aa13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 LTN1O94822 1766 aa13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 SOCS7O14512 581 aa13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 ILDR2Q71H61 639 aa13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 DDX17Q92841 729 aaKnown RBP13.82□□□□□ -0.2
ECHDC3-203ENST00000422887 COL18A1P39060 1754 aa13.81□□□□□ -0.2
ECHDC3-203ENST00000422887 SLIT3O75094 1523 aa13.81□□□□□ -0.2
ECHDC3-203ENST00000422887 FOXO3O43524 673 aa13.81□□□□□ -0.2
ECHDC3-203ENST00000422887 PSME1Q06323 249 aa13.81□□□□□ -0.2
ECHDC3-203ENST00000422887 WASHC2AQ641Q2 1341 aa13.81□□□□□ -0.2
ECHDC3-203ENST00000422887 A0A1W2PP64 1363 aa13.81□□□□□ -0.2
ECHDC3-203ENST00000422887 NWD2Q9ULI1 1742 aa13.81□□□□□ -0.2
ECHDC3-203ENST00000422887 C11orf95C9JLR9 678 aaPredicted RBP13.8□□□□□ -0.2
ECHDC3-203ENST00000422887 RGPD5Q99666 1765 aa13.8□□□□□ -0.2
ECHDC3-203ENST00000422887 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
ECHDC3-203ENST00000422887 EDC4Q6P2E9 1401 aaKnown RBP13.8□□□□□ -0.2
ECHDC3-203ENST00000422887 LMO7Q8WWI1 1683 aa13.79□□□□□ -0.2
ECHDC3-203ENST00000422887 POLR3GLQ9BT43 218 aa13.79□□□□□ -0.2
ECHDC3-203ENST00000422887 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
ECHDC3-203ENST00000422887 KRT28Q7Z3Y7 464 aa13.78□□□□□ -0.2
ECHDC3-203ENST00000422887 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
ECHDC3-203ENST00000422887 JCADQ9P266 1359 aa13.78□□□□□ -0.2
ECHDC3-203ENST00000422887 NFAT5O94916 1531 aa13.78□□□□□ -0.2
ECHDC3-203ENST00000422887 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.21
ECHDC3-203ENST00000422887 TTC21AQ8NDW8 1320 aa13.77□□□□□ -0.21
ECHDC3-203ENST00000422887 LRRC59Q96AG4 307 aaKnown RBP13.77□□□□□ -0.21
ECHDC3-203ENST00000422887 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
ECHDC3-203ENST00000422887 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
ECHDC3-203ENST00000422887 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
ECHDC3-203ENST00000422887 COL14A1Q05707 1796 aaKnown RBP13.75□□□□□ -0.21
ECHDC3-203ENST00000422887 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
ECHDC3-203ENST00000422887 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
ECHDC3-203ENST00000422887 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
ECHDC3-203ENST00000422887 USP19O94966 1318 aa13.73□□□□□ -0.21
ECHDC3-203ENST00000422887 TTC21BQ7Z4L5 1316 aa13.73□□□□□ -0.21
ECHDC3-203ENST00000422887 XPCQ01831 940 aaPredicted RBP13.73□□□□□ -0.21
ECHDC3-203ENST00000422887 NSD2O96028 1365 aa13.72□□□□□ -0.21
ECHDC3-203ENST00000422887 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
ECHDC3-203ENST00000422887 PANK3Q9H999 370 aa13.72□□□□□ -0.21
ECHDC3-203ENST00000422887 ABCC6O95255 1503 aa13.72□□□□□ -0.21
ECHDC3-203ENST00000422887 USP31Q70CQ4 1352 aa13.71□□□□□ -0.21
ECHDC3-203ENST00000422887 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
ECHDC3-203ENST00000422887 PEAK1Q9H792 1746 aa13.71□□□□□ -0.21
ECHDC3-203ENST00000422887 SPATA31A6Q5VVP1 1343 aa13.7□□□□□ -0.22
ECHDC3-203ENST00000422887 ABTB2Q8N961 1025 aa13.7□□□□□ -0.22
ECHDC3-203ENST00000422887 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
ECHDC3-203ENST00000422887 NLRP13Q86W25 1043 aa13.69□□□□□ -0.22
ECHDC3-203ENST00000422887 KNSTRNQ9Y448 316 aa13.69□□□□□ -0.22
ECHDC3-203ENST00000422887 NPC1L1Q9UHC9 1359 aa13.69□□□□□ -0.22
ECHDC3-203ENST00000422887 LMOD2Q6P5Q4 547 aa13.68□□□□□ -0.22
ECHDC3-203ENST00000422887 CARD14Q9BXL6 1004 aa13.68□□□□□ -0.22
ECHDC3-203ENST00000422887 FAM208AQ9UK61 1670 aaKnown RBP13.68□□□□□ -0.22
ECHDC3-203ENST00000422887 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
ECHDC3-203ENST00000422887 SLIT2O94813 1529 aa13.68□□□□□ -0.22
ECHDC3-203ENST00000422887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.67□□□□□ -0.22
ECHDC3-203ENST00000422887 NLRP6P59044 892 aa13.66□□□□□ -0.22
ECHDC3-203ENST00000422887 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
ECHDC3-203ENST00000422887 NME9Q86XW9 330 aa13.65□□□□□ -0.22
ECHDC3-203ENST00000422887 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
ECHDC3-203ENST00000422887 COG3Q96JB2 828 aa13.65□□□□□ -0.22
ECHDC3-203ENST00000422887 CPDO75976 1380 aa13.65□□□□□ -0.22
ECHDC3-203ENST00000422887 FYB1O15117 783 aa13.64□□□□□ -0.23
ECHDC3-203ENST00000422887 GLI3P10071 1580 aa13.63□□□□□ -0.23
ECHDC3-203ENST00000422887 BRWD3Q6RI45 1802 aa13.63□□□□□ -0.23
ECHDC3-203ENST00000422887 HAP1P54257 671 aaPredicted RBP13.63□□□□□ -0.23
ECHDC3-203ENST00000422887 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
ECHDC3-203ENST00000422887 BCL9LQ86UU0 1499 aa13.62□□□□□ -0.23
ECHDC3-203ENST00000422887 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
ECHDC3-203ENST00000422887 RGPD1P0DJD0 1748 aa13.61□□□□□ -0.23
ECHDC3-203ENST00000422887 THSD7AQ9UPZ6 1657 aa13.61□□□□□ -0.23
ECHDC3-203ENST00000422887 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
ECHDC3-203ENST00000422887 GGNBP2Q9H3C7 697 aa13.61□□□□□ -0.23
ECHDC3-203ENST00000422887 SMG6Q86US8 1419 aaKnown RBP13.61□□□□□ -0.23
ECHDC3-203ENST00000422887 AATKQ6ZMQ8 1374 aa13.6□□□□□ -0.23
ECHDC3-203ENST00000422887 GCP02774 474 aa13.6□□□□□ -0.23
ECHDC3-203ENST00000422887 SHANK3Q9BYB0 1731 aa13.6□□□□□ -0.23
ECHDC3-203ENST00000422887 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
ECHDC3-203ENST00000422887 KIF24Q5T7B8 1368 aa13.59□□□□□ -0.23
ECHDC3-203ENST00000422887 EP400Q96L91 3159 aa13.59□□□□□ -0.23
ECHDC3-203ENST00000422887 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
ECHDC3-203ENST00000422887 RGS17Q9UGC6 210 aaPredicted RBP13.59□□□□□ -0.23
ECHDC3-203ENST00000422887 PARP4Q9UKK3 1724 aaKnown RBP13.59□□□□□ -0.23
ECHDC3-203ENST00000422887 RTL1A6NKG5 1358 aa13.58□□□□□ -0.23
ECHDC3-203ENST00000422887 ATRNO75882 1429 aa13.58□□□□□ -0.24
ECHDC3-203ENST00000422887 COL5A2P05997 1499 aaPredicted RBP13.58□□□□□ -0.24
ECHDC3-203ENST00000422887 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
ECHDC3-203ENST00000422887 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-203ENST00000422887 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-203ENST00000422887 MORC1Q86VD1 984 aa13.57□□□□□ -0.24
ECHDC3-203ENST00000422887 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
ECHDC3-203ENST00000422887 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
ECHDC3-203ENST00000422887 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
ECHDC3-203ENST00000422887 FNBP4Q8N3X1 1017 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms