RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 PRDM2Q13029 1718 aa21.03■□□□□ 0.96
TRAPPC10-203ENST00000422875 UQCRHLA0A096LP55 91 aa21.03■□□□□ 0.96
TRAPPC10-203ENST00000422875 GNAI2P04899 355 aa21.03■□□□□ 0.96
TRAPPC10-203ENST00000422875 UQCRHP07919 91 aa21.03■□□□□ 0.96
TRAPPC10-203ENST00000422875 ANKRD20A12PQ8NF67 263 aa21.03■□□□□ 0.96
TRAPPC10-203ENST00000422875 PSMA5P28066 241 aa21.03■□□□□ 0.96
TRAPPC10-203ENST00000422875 KINO60870 393 aaKnown RBP21.02■□□□□ 0.96
TRAPPC10-203ENST00000422875 PRAM1Q96QH2 718 aa21.02■□□□□ 0.96
TRAPPC10-203ENST00000422875 CEP89Q96ST8 783 aa21.02■□□□□ 0.96
TRAPPC10-203ENST00000422875 LETM1O95202 739 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC10-203ENST00000422875 NLRP6P59044 892 aa21.02■□□□□ 0.96
TRAPPC10-203ENST00000422875 HOOK1Q9UJC3 728 aaKnown RBP21.02■□□□□ 0.95
TRAPPC10-203ENST00000422875 MAP4K4O95819 1239 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 PDCP20941 246 aa21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 SULT6B1Q6IMI4 303 aa21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 TBC1D2Q9BYX2 928 aa21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 NAT10Q9H0A0 1025 aaKnown RBP21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 CCDC30Q5VVM6 783 aa21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 NINLQ9Y2I6 1382 aa21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 PRG4Q92954 1404 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC10-203ENST00000422875 C9orf84Q5VXU9 1444 aa21■□□□□ 0.95
TRAPPC10-203ENST00000422875 SMC2O95347 1197 aa21■□□□□ 0.95
TRAPPC10-203ENST00000422875 ATP2B1P20020 1258 aa21■□□□□ 0.95
TRAPPC10-203ENST00000422875 PSME1Q06323 249 aa20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 CABP1Q9NZU7 370 aa20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 ZSCAN30Q86W11 494 aa20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 SYCE3A1L190 88 aa20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 SETQ01105 290 aaPredicted RBP20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 TTLL5Q6EMB2 1281 aa20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 WDR33Q9C0J8 1336 aaKnown RBP20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 CT47B1P0C2W7 299 aaPredicted RBP20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 STK3Q13188 491 aa20.99■□□□□ 0.95
TRAPPC10-203ENST00000422875 RRP9O43818 475 aaKnown RBP20.98■□□□□ 0.95
TRAPPC10-203ENST00000422875 THUMPD2Q9BTF0 503 aaKnown RBP20.98■□□□□ 0.95
TRAPPC10-203ENST00000422875 SAFBQ15424 915 aaKnown RBP eCLIP20.98■□□□□ 0.953e-6■■■□□ 19.1
TRAPPC10-203ENST00000422875 RARSP54136 660 aaKnown RBP20.98■□□□□ 0.95
TRAPPC10-203ENST00000422875 DNAJC2Q99543 621 aaKnown RBP20.98■□□□□ 0.95
TRAPPC10-203ENST00000422875 CCDC192P0DO97 292 aa20.97■□□□□ 0.95
TRAPPC10-203ENST00000422875 LRRCC1Q9C099 1032 aa20.97■□□□□ 0.95
TRAPPC10-203ENST00000422875 HSP90B2PQ58FF3 399 aa20.97■□□□□ 0.95
TRAPPC10-203ENST00000422875 PATL2C9JE40 543 aaKnown RBP20.96■□□□□ 0.95
TRAPPC10-203ENST00000422875 IL1RAPL2Q9NP60 686 aa20.96■□□□□ 0.95
TRAPPC10-203ENST00000422875 SSH1Q8WYL5 1049 aa20.96■□□□□ 0.95
TRAPPC10-203ENST00000422875 UPF3BQ9BZI7 483 aaKnown RBP20.95■□□□□ 0.94
TRAPPC10-203ENST00000422875 TMPOP42166 694 aaKnown RBP20.95■□□□□ 0.94
TRAPPC10-203ENST00000422875 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
TRAPPC10-203ENST00000422875 CYP46A1Q9Y6A2 500 aa20.95■□□□□ 0.94
TRAPPC10-203ENST00000422875 HDGFL1Q5TGJ6 251 aa20.95■□□□□ 0.94
TRAPPC10-203ENST00000422875 DAPK1P53355 1430 aa20.94■□□□□ 0.94
TRAPPC10-203ENST00000422875 ANKRD30BQ9BXX2 1392 aa20.94■□□□□ 0.94
TRAPPC10-203ENST00000422875 TNMDQ9H2S6 317 aa20.94■□□□□ 0.94
TRAPPC10-203ENST00000422875 DUSP27Q5VZP5 1158 aa20.94■□□□□ 0.94
TRAPPC10-203ENST00000422875 LARP1BQ659C4 914 aaKnown RBP20.94■□□□□ 0.94
TRAPPC10-203ENST00000422875 SCAPERQ9BY12 1400 aa20.93■□□□□ 0.94
TRAPPC10-203ENST00000422875 EXOC6BQ9Y2D4 811 aa20.93■□□□□ 0.94
TRAPPC10-203ENST00000422875 CCDC112Q8NEF3 446 aa20.93■□□□□ 0.94
TRAPPC10-203ENST00000422875 RAPGEF4Q8WZA2 1011 aa20.93■□□□□ 0.94
TRAPPC10-203ENST00000422875 ERICH2A1L162 156 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 RAD21O60216 631 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 KRT85P78386 507 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 GAS2L2Q8NHY3 880 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 G3V3G9 751 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 DCAF8Q5TAQ9 597 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 SSFA2P28290 1259 aa20.92■□□□□ 0.94
TRAPPC10-203ENST00000422875 DHX16O60231 1041 aaKnown RBP20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 STK38Q15208 465 aa20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 EHBP1L1Q8N3D4 1523 aa20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 NLRP2Q9NX02 1062 aa20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 ARHGAP5Q13017 1502 aa20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 CCDC47Q96A33 483 aaKnown RBP20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 SYTL4Q96C24 671 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 SIL1Q9H173 461 aa20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 FILIP1Q7Z7B0 1213 aa20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 TNPO1Q92973 898 aaKnown RBP20.91■□□□□ 0.94
TRAPPC10-203ENST00000422875 NCAPD3P42695 1498 aa20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 NAP1L1P55209 391 aaKnown RBP20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 CCT4P50991 539 aaKnown RBP20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 CDK19Q9BWU1 502 aa20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 XPCQ01831 940 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 TMX4Q9H1E5 349 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 IGHDP01880 384 aa20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 NCOA1Q15788 1441 aa20.9■□□□□ 0.94
TRAPPC10-203ENST00000422875 CWC27Q6UX04 472 aaKnown RBP20.89■□□□□ 0.94
TRAPPC10-203ENST00000422875 EVA1CP58658 441 aa20.89■□□□□ 0.93
TRAPPC10-203ENST00000422875 RRS1Q15050 365 aaKnown RBP20.89■□□□□ 0.93
TRAPPC10-203ENST00000422875 TXNDC2Q86VQ3 553 aa20.89■□□□□ 0.93
TRAPPC10-203ENST00000422875 ME1P48163 572 aa20.89■□□□□ 0.93
TRAPPC10-203ENST00000422875 FERMT3Q86UX7 667 aa20.89■□□□□ 0.93
TRAPPC10-203ENST00000422875 SMARCA5O60264 1052 aaPredicted RBP20.89■□□□□ 0.93
TRAPPC10-203ENST00000422875 VPS37DQ86XT2 251 aa20.89■□□□□ 0.93
TRAPPC10-203ENST00000422875 RUFY1Q96T51 708 aa20.88■□□□□ 0.93
TRAPPC10-203ENST00000422875 BRPF1P55201 1214 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC10-203ENST00000422875 CCDC66A2RUB6 948 aa20.87■□□□□ 0.93
TRAPPC10-203ENST00000422875 SRGAP3O43295 1099 aa20.87■□□□□ 0.93
TRAPPC10-203ENST00000422875 FAM177A1Q8N128 213 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC10-203ENST00000422875 STK11IPQ8N1F8 1099 aa20.87■□□□□ 0.93
TRAPPC10-203ENST00000422875 SRCIN1Q9C0H9 1055 aa20.87■□□□□ 0.93
TRAPPC10-203ENST00000422875 JAKMIP1Q96N16 626 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms