RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 LRRC59Q96AG4 307 aaKnown RBP12.91□□□□□ -0.34
PDGFC-202ENST00000422544 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
PDGFC-202ENST00000422544 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
PDGFC-202ENST00000422544 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
PDGFC-202ENST00000422544 MEX3CQ5U5Q3 659 aaKnown RBP12.9□□□□□ -0.34
PDGFC-202ENST00000422544 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.34
PDGFC-202ENST00000422544 BRWD3Q6RI45 1802 aa12.9□□□□□ -0.34
PDGFC-202ENST00000422544 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
PDGFC-202ENST00000422544 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
PDGFC-202ENST00000422544 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
PDGFC-202ENST00000422544 PXDNQ92626 1479 aa12.88□□□□□ -0.35
PDGFC-202ENST00000422544 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
PDGFC-202ENST00000422544 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
PDGFC-202ENST00000422544 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
PDGFC-202ENST00000422544 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
PDGFC-202ENST00000422544 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
PDGFC-202ENST00000422544 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
PDGFC-202ENST00000422544 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
PDGFC-202ENST00000422544 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
PDGFC-202ENST00000422544 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
PDGFC-202ENST00000422544 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
PDGFC-202ENST00000422544 NINLQ9Y2I6 1382 aa12.85□□□□□ -0.35
PDGFC-202ENST00000422544 TOPAZ1Q8N9V7 1692 aa12.85□□□□□ -0.35
PDGFC-202ENST00000422544 CPSF1Q10570 1443 aaKnown RBP12.85□□□□□ -0.35
PDGFC-202ENST00000422544 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
PDGFC-202ENST00000422544 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
PDGFC-202ENST00000422544 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
PDGFC-202ENST00000422544 ATRNO75882 1429 aa12.84□□□□□ -0.35
PDGFC-202ENST00000422544 USP6P35125 1406 aa12.84□□□□□ -0.35
PDGFC-202ENST00000422544 WASHC2AQ641Q2 1341 aa12.84□□□□□ -0.35
PDGFC-202ENST00000422544 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
PDGFC-202ENST00000422544 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
PDGFC-202ENST00000422544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDGFC-202ENST00000422544 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
PDGFC-202ENST00000422544 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
PDGFC-202ENST00000422544 ANKRD36BQ8N2N9 1353 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 TNS3Q68CZ2 1445 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 SSH2Q76I76 1423 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 CABLES1Q8TDN4 633 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 CARD14Q9BXL6 1004 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 PANK3Q9H999 370 aa12.82□□□□□ -0.36
PDGFC-202ENST00000422544 BCL9LQ86UU0 1499 aa12.81□□□□□ -0.36
PDGFC-202ENST00000422544 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.81□□□□□ -0.36
PDGFC-202ENST00000422544 GLI3P10071 1580 aa12.81□□□□□ -0.36
PDGFC-202ENST00000422544 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
PDGFC-202ENST00000422544 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
PDGFC-202ENST00000422544 NLRP6P59044 892 aa12.8□□□□□ -0.36
PDGFC-202ENST00000422544 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
PDGFC-202ENST00000422544 NME9Q86XW9 330 aa12.8□□□□□ -0.36
PDGFC-202ENST00000422544 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
PDGFC-202ENST00000422544 ADAMTS2O95450 1211 aa12.79□□□□□ -0.36
PDGFC-202ENST00000422544 HAP1P54257 671 aaPredicted RBP12.79□□□□□ -0.36
PDGFC-202ENST00000422544 NLRP13Q86W25 1043 aa12.79□□□□□ -0.36
PDGFC-202ENST00000422544 FNBP4Q8N3X1 1017 aaPredicted RBP12.79□□□□□ -0.36
PDGFC-202ENST00000422544 LRP5O75197 1615 aa12.79□□□□□ -0.36
PDGFC-202ENST00000422544 TTC21AQ8NDW8 1320 aa12.79□□□□□ -0.36
PDGFC-202ENST00000422544 EDC4Q6P2E9 1401 aaKnown RBP12.78□□□□□ -0.36
PDGFC-202ENST00000422544 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
PDGFC-202ENST00000422544 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
PDGFC-202ENST00000422544 FYB1O15117 783 aa12.76□□□□□ -0.37
PDGFC-202ENST00000422544 GCP02774 474 aa12.75□□□□□ -0.37
PDGFC-202ENST00000422544 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
PDGFC-202ENST00000422544 GGNBP2Q9H3C7 697 aa12.75□□□□□ -0.37
PDGFC-202ENST00000422544 USP19O94966 1318 aa12.74□□□□□ -0.37
PDGFC-202ENST00000422544 SOX12O15370 315 aa12.74□□□□□ -0.37
PDGFC-202ENST00000422544 ZC3H6P61129 1189 aaKnown RBP12.74□□□□□ -0.37
PDGFC-202ENST00000422544 NGLY1Q96IV0 654 aa12.74□□□□□ -0.37
PDGFC-202ENST00000422544 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
PDGFC-202ENST00000422544 MYOM1P52179 1685 aa12.73□□□□□ -0.37
PDGFC-202ENST00000422544 USP31Q70CQ4 1352 aa12.73□□□□□ -0.37
PDGFC-202ENST00000422544 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
PDGFC-202ENST00000422544 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
PDGFC-202ENST00000422544 COG3Q96JB2 828 aa12.73□□□□□ -0.37
PDGFC-202ENST00000422544 USP21Q9UK80 565 aa12.73□□□□□ -0.37
PDGFC-202ENST00000422544 KNSTRNQ9Y448 316 aa12.73□□□□□ -0.37
PDGFC-202ENST00000422544 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
PDGFC-202ENST00000422544 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
PDGFC-202ENST00000422544 FAM83GA6ND36 823 aa12.72□□□□□ -0.37
PDGFC-202ENST00000422544 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
PDGFC-202ENST00000422544 ABCA3Q99758 1704 aa12.71□□□□□ -0.37
PDGFC-202ENST00000422544 ZBTB7CA1YPR0 619 aa12.71□□□□□ -0.37
PDGFC-202ENST00000422544 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
PDGFC-202ENST00000422544 KCNH5Q8NCM2 988 aa12.71□□□□□ -0.37
PDGFC-202ENST00000422544 NRKQ7Z2Y5 1582 aa12.7□□□□□ -0.38
PDGFC-202ENST00000422544 FBLN1P23142 703 aa12.7□□□□□ -0.38
PDGFC-202ENST00000422544 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
PDGFC-202ENST00000422544 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
PDGFC-202ENST00000422544 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
PDGFC-202ENST00000422544 DEFB132Q7Z7B7 95 aa12.7□□□□□ -0.38
PDGFC-202ENST00000422544 PRDM11Q9NQV5 511 aa12.7□□□□□ -0.38
PDGFC-202ENST00000422544 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
PDGFC-202ENST00000422544 SLIT2O94813 1529 aa12.7□□□□□ -0.38
PDGFC-202ENST00000422544 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
PDGFC-202ENST00000422544 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
PDGFC-202ENST00000422544 KCNA4P22459 653 aa12.69□□□□□ -0.38
PDGFC-202ENST00000422544 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
PDGFC-202ENST00000422544 PLCH1Q4KWH8 1693 aa12.69□□□□□ -0.38
PDGFC-202ENST00000422544 OVOS2A0A0J9YW53 1432 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms