RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SBNO1A3KN83 1393 aa24.18■■□□□ 1.46
LINC00271-201ENST00000421378 PAK3O75914 559 aaPredicted RBP24.17■■□□□ 1.46
LINC00271-201ENST00000421378 SSH2Q76I76 1423 aa24.17■■□□□ 1.46
LINC00271-201ENST00000421378 HSPA1LP34931 641 aa24.16■■□□□ 1.46
LINC00271-201ENST00000421378 TNS3Q68CZ2 1445 aa24.16■■□□□ 1.46
LINC00271-201ENST00000421378 NSD3Q9BZ95 1437 aa24.16■■□□□ 1.46
LINC00271-201ENST00000421378 LRRC59Q96AG4 307 aaKnown RBP24.15■■□□□ 1.46
LINC00271-201ENST00000421378 SPATA31A3Q5VYP0 1347 aa24.14■■□□□ 1.46
LINC00271-201ENST00000421378 TTC21BQ7Z4L5 1316 aa24.14■■□□□ 1.46
LINC00271-201ENST00000421378 CARD14Q9BXL6 1004 aa24.14■■□□□ 1.45
LINC00271-201ENST00000421378 ALS2Q96Q42 1657 aa24.14■■□□□ 1.45
LINC00271-201ENST00000421378 TTC21AQ8NDW8 1320 aa24.13■■□□□ 1.45
LINC00271-201ENST00000421378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.12■■□□□ 1.45
LINC00271-201ENST00000421378 LMOD2Q6P5Q4 547 aa24.12■■□□□ 1.45
LINC00271-201ENST00000421378 ARHGEF10O15013 1369 aa24.11■■□□□ 1.45
LINC00271-201ENST00000421378 PIK3C2AO00443 1686 aa24.11■■□□□ 1.45
LINC00271-201ENST00000421378 DDX10Q13206 875 aaKnown RBP24.1■■□□□ 1.45
LINC00271-201ENST00000421378 ABTB2Q8N961 1025 aa24.1■■□□□ 1.45
LINC00271-201ENST00000421378 KNSTRNQ9Y448 316 aa24.08■■□□□ 1.45
LINC00271-201ENST00000421378 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.45
LINC00271-201ENST00000421378 SHPRHQ149N8 1683 aa24.07■■□□□ 1.44
LINC00271-201ENST00000421378 NME9Q86XW9 330 aa24.07■■□□□ 1.44
LINC00271-201ENST00000421378 PNPLA6Q8IY17 1366 aa24.07■■□□□ 1.44
LINC00271-201ENST00000421378 JCADQ9P266 1359 aa24.07■■□□□ 1.44
LINC00271-201ENST00000421378 KIF20BQ96Q89 1820 aa24.06■■□□□ 1.44
LINC00271-201ENST00000421378 PER1O15534 1290 aaPredicted RBP24.06■■□□□ 1.44
LINC00271-201ENST00000421378 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
LINC00271-201ENST00000421378 NUTM2GQ5VZR2 741 aa24.04■■□□□ 1.44
LINC00271-201ENST00000421378 MED1Q15648 1581 aaPredicted RBP24.04■■□□□ 1.44
LINC00271-201ENST00000421378 NLRP6P59044 892 aa24.03■■□□□ 1.44
LINC00271-201ENST00000421378 FYB1O15117 783 aa24.03■■□□□ 1.44
LINC00271-201ENST00000421378 NLRP13Q86W25 1043 aa24.03■■□□□ 1.44
LINC00271-201ENST00000421378 USP54Q70EL1 1684 aa24.02■■□□□ 1.44
LINC00271-201ENST00000421378 USP31Q70CQ4 1352 aa24.01■■□□□ 1.43
LINC00271-201ENST00000421378 OVOS2A0A0J9YW53 1432 aa24.01■■□□□ 1.43
LINC00271-201ENST00000421378 OVOS2Q6IE36 1432 aa24.01■■□□□ 1.43
LINC00271-201ENST00000421378 NSD2O96028 1365 aa24.01■■□□□ 1.43
LINC00271-201ENST00000421378 MARF1Q9Y4F3 1742 aaKnown RBP24.01■■□□□ 1.43
LINC00271-201ENST00000421378 GGNBP2Q9H3C7 697 aa24■■□□□ 1.43
LINC00271-201ENST00000421378 PLEKHG5O94827 1062 aa23.99■■□□□ 1.43
LINC00271-201ENST00000421378 AMER1Q5JTC6 1135 aaPredicted RBP23.99■■□□□ 1.43
LINC00271-201ENST00000421378 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
LINC00271-201ENST00000421378 CRYBG1Q9Y4K1 1723 aa23.99■■□□□ 1.43
LINC00271-201ENST00000421378 ABCA3Q99758 1704 aa23.99■■□□□ 1.43
LINC00271-201ENST00000421378 COG3Q96JB2 828 aa23.99■■□□□ 1.43
LINC00271-201ENST00000421378 USP19O94966 1318 aa23.98■■□□□ 1.43
LINC00271-201ENST00000421378 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
LINC00271-201ENST00000421378 ILDR1Q86SU0 546 aaPredicted RBP23.98■■□□□ 1.43
LINC00271-201ENST00000421378 PHRF1Q9P1Y6 1649 aaKnown RBP23.98■■□□□ 1.43
LINC00271-201ENST00000421378 CABLES1Q8TDN4 633 aa23.97■■□□□ 1.43
LINC00271-201ENST00000421378 SLIT3O75094 1523 aa23.97■■□□□ 1.43
LINC00271-201ENST00000421378 SPATA31A6Q5VVP1 1343 aa23.96■■□□□ 1.43
LINC00271-201ENST00000421378 NPC1L1Q9UHC9 1359 aa23.96■■□□□ 1.43
LINC00271-201ENST00000421378 HAP1P54257 671 aaPredicted RBP23.95■■□□□ 1.43
LINC00271-201ENST00000421378 CC2D1BQ5T0F9 858 aaKnown RBP23.94■■□□□ 1.42
LINC00271-201ENST00000421378 GCP02774 474 aa23.92■■□□□ 1.42
LINC00271-201ENST00000421378 KCNH5Q8NCM2 988 aa23.92■■□□□ 1.42
LINC00271-201ENST00000421378 NUTM2BA6NNL0 878 aaPredicted RBP23.91■■□□□ 1.42
LINC00271-201ENST00000421378 NUTM2EB1AL46 878 aaPredicted RBP23.91■■□□□ 1.42
LINC00271-201ENST00000421378 SOX12O15370 315 aa23.91■■□□□ 1.42
LINC00271-201ENST00000421378 CNGB1Q14028 1251 aaPredicted RBP23.91■■□□□ 1.42
LINC00271-201ENST00000421378 NUTM2AQ8IVF1 878 aaPredicted RBP23.91■■□□□ 1.42
LINC00271-201ENST00000421378 NFAT5O94916 1531 aa23.9■■□□□ 1.42
LINC00271-201ENST00000421378 MORC1Q86VD1 984 aa23.9■■□□□ 1.42
LINC00271-201ENST00000421378 LRP6O75581 1613 aa23.88■■□□□ 1.41
LINC00271-201ENST00000421378 ADAMTS2O95450 1211 aa23.86■■□□□ 1.41
LINC00271-201ENST00000421378 TNNT2P45379 298 aaPredicted RBP23.86■■□□□ 1.41
LINC00271-201ENST00000421378 ZC3H6P61129 1189 aaKnown RBP23.85■■□□□ 1.41
LINC00271-201ENST00000421378 CPDO75976 1380 aa23.85■■□□□ 1.41
LINC00271-201ENST00000421378 KIAA0232Q92628 1395 aa23.85■■□□□ 1.41
LINC00271-201ENST00000421378 AATKQ6ZMQ8 1374 aa23.83■■□□□ 1.41
LINC00271-201ENST00000421378 LTN1O94822 1766 aa23.83■■□□□ 1.41
LINC00271-201ENST00000421378 FBLN1P23142 703 aa23.82■■□□□ 1.4
LINC00271-201ENST00000421378 PRDM11Q9NQV5 511 aa23.82■■□□□ 1.4
LINC00271-201ENST00000421378 PARD3Q8TEW0 1356 aa23.82■■□□□ 1.4
LINC00271-201ENST00000421378 MEX3CQ5U5Q3 659 aaKnown RBP23.81■■□□□ 1.4
LINC00271-201ENST00000421378 ARHGEF25Q86VW2 580 aa23.81■■□□□ 1.4
LINC00271-201ENST00000421378 ZBTB7CA1YPR0 619 aa23.8■■□□□ 1.4
LINC00271-201ENST00000421378 RRS1Q15050 365 aaKnown RBP23.8■■□□□ 1.4
LINC00271-201ENST00000421378 MAP3K19Q56UN5 1328 aa23.79■■□□□ 1.4
LINC00271-201ENST00000421378 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
LINC00271-201ENST00000421378 MAP2P11137 1827 aaKnown RBP23.78■■□□□ 1.4
LINC00271-201ENST00000421378 RALBP1Q15311 655 aa23.78■■□□□ 1.4
LINC00271-201ENST00000421378 CHRNA2Q15822 529 aa23.78■■□□□ 1.4
LINC00271-201ENST00000421378 C8orf37Q96NL8 207 aa23.78■■□□□ 1.4
LINC00271-201ENST00000421378 ABCC6O95255 1503 aa23.77■■□□□ 1.4
LINC00271-201ENST00000421378 FAM83GA6ND36 823 aa23.77■■□□□ 1.4
LINC00271-201ENST00000421378 PRKRIP1Q9H875 184 aaPredicted RBP23.76■■□□□ 1.39
LINC00271-201ENST00000421378 POLKQ9UBT6 870 aa23.76■■□□□ 1.39
LINC00271-201ENST00000421378 EMILIN1Q9Y6C2 1016 aa23.76■■□□□ 1.39
LINC00271-201ENST00000421378 PLCH1Q4KWH8 1693 aa23.75■■□□□ 1.39
LINC00271-201ENST00000421378 AMPHP49418 695 aa23.75■■□□□ 1.39
LINC00271-201ENST00000421378 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
LINC00271-201ENST00000421378 KIF24Q5T7B8 1368 aa23.75■■□□□ 1.39
LINC00271-201ENST00000421378 SMG6Q86US8 1419 aaKnown RBP23.75■■□□□ 1.39
LINC00271-201ENST00000421378 LMO7Q8WWI1 1683 aa23.75■■□□□ 1.39
LINC00271-201ENST00000421378 PPM1GO15355 546 aaPredicted RBP23.74■■□□□ 1.39
LINC00271-201ENST00000421378 ANP32CO43423 234 aa23.74■■□□□ 1.39
LINC00271-201ENST00000421378 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
LINC00271-201ENST00000421378 COL18A1P39060 1754 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms