RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 HDAC1Q13547 482 aaPredicted RBP20.1■□□□□ 0.81
TRIM13-204ENST00000420995 STK26Q9P289 416 aa20.09■□□□□ 0.81
TRIM13-204ENST00000420995 DDX19BQ9UMR2 479 aa20.09■□□□□ 0.81
TRIM13-204ENST00000420995 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
TRIM13-204ENST00000420995 SIGLEC1Q9BZZ2 1709 aa20.09■□□□□ 0.81
TRIM13-204ENST00000420995 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
TRIM13-204ENST00000420995 TMEM57Q8N5G2 664 aa20.08■□□□□ 0.81
TRIM13-204ENST00000420995 PUS7Q96PZ0 661 aaKnown RBP20.08■□□□□ 0.81
TRIM13-204ENST00000420995 GZF1Q9H116 711 aaPredicted RBP20.08■□□□□ 0.81
TRIM13-204ENST00000420995 ABCC11Q96J66 1382 aa20.08■□□□□ 0.81
TRIM13-204ENST00000420995 MCM4P33991 863 aa20.08■□□□□ 0.8
TRIM13-204ENST00000420995 ABCC3O15438 1527 aa20.07■□□□□ 0.8
TRIM13-204ENST00000420995 L1TD1Q5T7N2 865 aaKnown RBP20.07■□□□□ 0.8
TRIM13-204ENST00000420995 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
TRIM13-204ENST00000420995 EIF5BO60841 1220 aaKnown RBP20.06■□□□□ 0.8
TRIM13-204ENST00000420995 COL3A1P02461 1466 aaPredicted RBP20.06■□□□□ 0.8
TRIM13-204ENST00000420995 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
TRIM13-204ENST00000420995 RIPK4P57078 832 aa20.05■□□□□ 0.8
TRIM13-204ENST00000420995 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
TRIM13-204ENST00000420995 NEXMIFQ5QGS0 1516 aa20.04■□□□□ 0.8
TRIM13-204ENST00000420995 RRAGDQ9NQL2 400 aaPredicted RBP20.04■□□□□ 0.8
TRIM13-204ENST00000420995 ZBTB40Q9NUA8 1239 aa20.04■□□□□ 0.8
TRIM13-204ENST00000420995 CHMP5Q9NZZ3 219 aa20.04■□□□□ 0.8
TRIM13-204ENST00000420995 FYB1O15117 783 aa20.03■□□□□ 0.8
TRIM13-204ENST00000420995 XRCC6P12956 609 aaKnown RBP eCLIP20.02■□□□□ 0.88e-7■■□□□ 11.8
TRIM13-204ENST00000420995 MINK1Q8N4C8 1332 aaPredicted RBP20.02■□□□□ 0.8
TRIM13-204ENST00000420995 DIP2CQ9Y2E4 1556 aa20.02■□□□□ 0.8
TRIM13-204ENST00000420995 GOLGA6L3A6NEY3 463 aa20.02■□□□□ 0.79
TRIM13-204ENST00000420995 LNPKQ9C0E8 428 aa20.02■□□□□ 0.79
TRIM13-204ENST00000420995 HSCBQ8IWL3 235 aa20.01■□□□□ 0.79
TRIM13-204ENST00000420995 PANK2Q9BZ23 570 aa20.01■□□□□ 0.79
TRIM13-204ENST00000420995 IL16Q14005 1332 aa20■□□□□ 0.79
TRIM13-204ENST00000420995 YEATS2Q9ULM3 1422 aa20■□□□□ 0.79
TRIM13-204ENST00000420995 NEO1Q92859 1461 aa20■□□□□ 0.79
TRIM13-204ENST00000420995 FSD2A1L4K1 749 aa20■□□□□ 0.79
TRIM13-204ENST00000420995 IDI1Q13907 227 aa20■□□□□ 0.79
TRIM13-204ENST00000420995 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
TRIM13-204ENST00000420995 TRAK2O60296 914 aa19.99■□□□□ 0.79
TRIM13-204ENST00000420995 DIAPH1O60610 1272 aaKnown RBP19.99■□□□□ 0.79
TRIM13-204ENST00000420995 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
TRIM13-204ENST00000420995 NUCB1Q02818 461 aa19.98■□□□□ 0.79
TRIM13-204ENST00000420995 ZNF692Q9BU19 519 aaPredicted RBP19.98■□□□□ 0.79
TRIM13-204ENST00000420995 RICTORQ6R327 1708 aa19.98■□□□□ 0.79
TRIM13-204ENST00000420995 PRAM1Q96QH2 718 aa19.98■□□□□ 0.79
TRIM13-204ENST00000420995 PIK3C2BO00750 1634 aa19.97■□□□□ 0.79
TRIM13-204ENST00000420995 TERF2IPQ9NYB0 399 aa19.97■□□□□ 0.79
TRIM13-204ENST00000420995 CD163L1Q9NR16 1453 aa19.97■□□□□ 0.79
TRIM13-204ENST00000420995 IPO8O15397 1037 aaKnown RBP19.97■□□□□ 0.79
TRIM13-204ENST00000420995 RSPH6AQ9H0K4 717 aa19.96■□□□□ 0.79
TRIM13-204ENST00000420995 FBLN1P23142 703 aa19.96■□□□□ 0.79
TRIM13-204ENST00000420995 CHD1LQ86WJ1 897 aa19.95■□□□□ 0.78
TRIM13-204ENST00000420995 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
TRIM13-204ENST00000420995 RBM25P49756 843 aaKnown RBP19.94■□□□□ 0.78
TRIM13-204ENST00000420995 PTPRMP28827 1452 aa19.94■□□□□ 0.78
TRIM13-204ENST00000420995 C1orf115Q9H7X2 142 aa19.94■□□□□ 0.78
TRIM13-204ENST00000420995 NCOA3Q9Y6Q9 1424 aa19.93■□□□□ 0.78
TRIM13-204ENST00000420995 PRKAR2BP31323 418 aa19.93■□□□□ 0.78
TRIM13-204ENST00000420995 THUMPD2Q9BTF0 503 aaKnown RBP19.93■□□□□ 0.78
TRIM13-204ENST00000420995 PNPLA6Q8IY17 1366 aa19.93■□□□□ 0.78
TRIM13-204ENST00000420995 DDIT3P35638 169 aa19.92■□□□□ 0.78
TRIM13-204ENST00000420995 ALDH1L2Q3SY69 923 aa19.92■□□□□ 0.78
TRIM13-204ENST00000420995 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
TRIM13-204ENST00000420995 MYO5BQ9ULV0 1848 aa19.91■□□□□ 0.78
TRIM13-204ENST00000420995 CABP1Q9NZU7 370 aa19.91■□□□□ 0.78
TRIM13-204ENST00000420995 MED14O60244 1454 aa19.91■□□□□ 0.78
TRIM13-204ENST00000420995 ANKRD45Q5TZF3 282 aa19.9■□□□□ 0.78
TRIM13-204ENST00000420995 DDX11L8A8MPP1 907 aa19.9■□□□□ 0.78
TRIM13-204ENST00000420995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.9■□□□□ 0.78
TRIM13-204ENST00000420995 PPIP5K1Q6PFW1 1433 aa19.9■□□□□ 0.78
TRIM13-204ENST00000420995 HDGFL2Q7Z4V5 671 aaPredicted RBP19.89■□□□□ 0.78
TRIM13-204ENST00000420995 FCHSD2O94868 740 aa19.89■□□□□ 0.77
TRIM13-204ENST00000420995 HMOX1P09601 288 aa19.89■□□□□ 0.77
TRIM13-204ENST00000420995 BMP2KLQ5H9B9 411 aa19.89■□□□□ 0.77
TRIM13-204ENST00000420995 SNX21Q969T3 373 aa19.89■□□□□ 0.77
TRIM13-204ENST00000420995 PHACTR3Q96KR7 559 aa19.89■□□□□ 0.77
TRIM13-204ENST00000420995 PNNQ9H307 717 aaKnown RBP19.89■□□□□ 0.77
TRIM13-204ENST00000420995 ZBTB7BO15156 539 aaPredicted RBP19.89■□□□□ 0.77
TRIM13-204ENST00000420995 CD2BP2O95400 341 aaKnown RBP19.89■□□□□ 0.77
TRIM13-204ENST00000420995 HSP90AB1P08238 724 aaKnown RBP19.89■□□□□ 0.77
TRIM13-204ENST00000420995 TSPYL6Q8N831 410 aa19.89■□□□□ 0.77
TRIM13-204ENST00000420995 TNPO1Q92973 898 aaKnown RBP19.89■□□□□ 0.77
TRIM13-204ENST00000420995 CDK19Q9BWU1 502 aa19.89■□□□□ 0.77
TRIM13-204ENST00000420995 ZFYVE9O95405 1425 aa19.88■□□□□ 0.77
TRIM13-204ENST00000420995 YTHDC2Q9H6S0 1430 aaKnown RBP19.88■□□□□ 0.77
TRIM13-204ENST00000420995 ELL2O00472 640 aaPredicted RBP19.88■□□□□ 0.77
TRIM13-204ENST00000420995 FBXO31Q5XUX0 539 aaPredicted RBP19.88■□□□□ 0.77
TRIM13-204ENST00000420995 KIF2CQ99661 725 aa19.88■□□□□ 0.77
TRIM13-204ENST00000420995 ANKRD26Q9UPS8 1709 aa19.88■□□□□ 0.77
TRIM13-204ENST00000420995 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
TRIM13-204ENST00000420995 SLC52A1Q9NWF4 448 aa19.87■□□□□ 0.77
TRIM13-204ENST00000420995 FAM135BQ49AJ0 1406 aa19.86■□□□□ 0.77
TRIM13-204ENST00000420995 MRE11P49959 708 aa19.86■□□□□ 0.77
TRIM13-204ENST00000420995 POLKQ9UBT6 870 aa19.86■□□□□ 0.77
TRIM13-204ENST00000420995 VAMP4O75379 141 aa19.86■□□□□ 0.77
TRIM13-204ENST00000420995 ARHGAP31Q2M1Z3 1444 aa19.85■□□□□ 0.77
TRIM13-204ENST00000420995 MRPL50Q8N5N7 158 aaKnown RBP19.85■□□□□ 0.77
TRIM13-204ENST00000420995 TBC1D9Q6ZT07 1266 aa19.85■□□□□ 0.77
TRIM13-204ENST00000420995 SIRT2Q8IXJ6 389 aa19.85■□□□□ 0.77
TRIM13-204ENST00000420995 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
TRIM13-204ENST00000420995 GRPEL1Q9HAV7 217 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms