RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 TXNDC2Q86VQ3 553 aa20.95■□□□□ 0.94
CTSB-203ENST00000420692 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.95■□□□□ 0.94
CTSB-203ENST00000420692 COG6Q9Y2V7 657 aa20.95■□□□□ 0.94
CTSB-203ENST00000420692 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.94■□□□□ 0.94
CTSB-203ENST00000420692 WASLO00401 505 aaPredicted RBP20.94■□□□□ 0.94
CTSB-203ENST00000420692 RLBP1P12271 317 aa20.94■□□□□ 0.94
CTSB-203ENST00000420692 CPSF1Q10570 1443 aaKnown RBP20.93■□□□□ 0.94
CTSB-203ENST00000420692 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
CTSB-203ENST00000420692 FRAT1Q92837 279 aaPredicted RBP20.93■□□□□ 0.94
CTSB-203ENST00000420692 TNRQ92752 1358 aa20.92■□□□□ 0.94
CTSB-203ENST00000420692 DIAPH1O60610 1272 aaKnown RBP20.92■□□□□ 0.94
CTSB-203ENST00000420692 BCL2L13Q9BXK5 485 aa20.92■□□□□ 0.94
CTSB-203ENST00000420692 ESF1Q9H501 851 aaKnown RBP20.92■□□□□ 0.94
CTSB-203ENST00000420692 POLKQ9UBT6 870 aa20.92■□□□□ 0.94
CTSB-203ENST00000420692 TSR2Q969E8 191 aaKnown RBP20.92■□□□□ 0.94
CTSB-203ENST00000420692 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
CTSB-203ENST00000420692 NCKAP5LQ9HCH0 1330 aa20.92■□□□□ 0.94
CTSB-203ENST00000420692 UBR1Q8IWV7 1749 aa20.91■□□□□ 0.94
CTSB-203ENST00000420692 TECPR2O15040 1411 aa20.91■□□□□ 0.94
CTSB-203ENST00000420692 KNDC1Q76NI1 1749 aa20.91■□□□□ 0.94
CTSB-203ENST00000420692 MAP2P11137 1827 aaKnown RBP20.91■□□□□ 0.94
CTSB-203ENST00000420692 CANXP27824 592 aaKnown RBP20.9■□□□□ 0.94
CTSB-203ENST00000420692 CLUAP1Q96AJ1 413 aa20.9■□□□□ 0.94
CTSB-203ENST00000420692 PPIP5K1Q6PFW1 1433 aa20.9■□□□□ 0.94
CTSB-203ENST00000420692 CDC42BPGQ6DT37 1551 aa20.9■□□□□ 0.94
CTSB-203ENST00000420692 FAM135BQ49AJ0 1406 aa20.89■□□□□ 0.93
CTSB-203ENST00000420692 TMEM2Q9UHN6 1383 aa20.89■□□□□ 0.93
CTSB-203ENST00000420692 SIRT1Q96EB6 747 aa20.89■□□□□ 0.93
CTSB-203ENST00000420692 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.93
CTSB-203ENST00000420692 NUDT16Q96DE0 195 aaKnown RBP20.88■□□□□ 0.93
CTSB-203ENST00000420692 ZBTB47Q9UFB7 747 aaPredicted RBP20.88■□□□□ 0.93
CTSB-203ENST00000420692 C8orf34Q49A92 452 aa20.87■□□□□ 0.93
CTSB-203ENST00000420692 NME9Q86XW9 330 aa20.87■□□□□ 0.93
CTSB-203ENST00000420692 CPS1P31327 1500 aa20.87■□□□□ 0.93
CTSB-203ENST00000420692 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
CTSB-203ENST00000420692 MAPK8IP3Q9UPT6 1336 aa20.86■□□□□ 0.93
CTSB-203ENST00000420692 LRRC7Q96NW7 1537 aa20.86■□□□□ 0.93
CTSB-203ENST00000420692 RIPK4P57078 832 aa20.86■□□□□ 0.93
CTSB-203ENST00000420692 EXOSC9Q06265 439 aaKnown RBP20.86■□□□□ 0.93
CTSB-203ENST00000420692 ADAMTS13Q76LX8 1427 aa20.86■□□□□ 0.93
CTSB-203ENST00000420692 RGS3P49796 1198 aa20.85■□□□□ 0.93
CTSB-203ENST00000420692 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
CTSB-203ENST00000420692 PRR36Q9H6K5 1346 aa20.85■□□□□ 0.93
CTSB-203ENST00000420692 PCDHB15Q9Y5E8 787 aa20.85■□□□□ 0.93
CTSB-203ENST00000420692 ROBO2Q9HCK4 1378 aa20.85■□□□□ 0.93
CTSB-203ENST00000420692 FCHSD2O94868 740 aa20.84■□□□□ 0.93
CTSB-203ENST00000420692 EMILIN1Q9Y6C2 1016 aa20.84■□□□□ 0.93
CTSB-203ENST00000420692 MON2Q7Z3U7 1717 aa20.84■□□□□ 0.93
CTSB-203ENST00000420692 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
CTSB-203ENST00000420692 LTKP29376 864 aa20.84■□□□□ 0.93
CTSB-203ENST00000420692 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
CTSB-203ENST00000420692 IL16Q14005 1332 aa20.83■□□□□ 0.93
CTSB-203ENST00000420692 CCDC61Q9Y6R9 512 aa20.83■□□□□ 0.93
CTSB-203ENST00000420692 FAM161AQ3B820 660 aa20.82■□□□□ 0.92
CTSB-203ENST00000420692 CT47B1P0C2W7 299 aaPredicted RBP20.82■□□□□ 0.92
CTSB-203ENST00000420692 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
CTSB-203ENST00000420692 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
CTSB-203ENST00000420692 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
CTSB-203ENST00000420692 CEBPAP49715 358 aaPredicted RBP20.81■□□□□ 0.92
CTSB-203ENST00000420692 PHACTR3Q96KR7 559 aa20.81■□□□□ 0.92
CTSB-203ENST00000420692 IL13P35225 146 aa20.8■□□□□ 0.92
CTSB-203ENST00000420692 SSH1Q8WYL5 1049 aa20.8■□□□□ 0.92
CTSB-203ENST00000420692 C3P01024 1663 aa20.8■□□□□ 0.92
CTSB-203ENST00000420692 PNNQ9H307 717 aaKnown RBP20.78■□□□□ 0.92
CTSB-203ENST00000420692 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
CTSB-203ENST00000420692 HMOX1P09601 288 aa20.78■□□□□ 0.92
CTSB-203ENST00000420692 ZKSCAN2Q63HK3 967 aa20.78■□□□□ 0.92
CTSB-203ENST00000420692 AAMPQ13685 434 aa20.77■□□□□ 0.92
CTSB-203ENST00000420692 MVPQ14764 893 aaKnown RBP20.77■□□□□ 0.91
CTSB-203ENST00000420692 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.91
CTSB-203ENST00000420692 CDK12Q9NYV4 1490 aaPredicted RBP20.76■□□□□ 0.91
CTSB-203ENST00000420692 ITSN1Q15811 1721 aa20.76■□□□□ 0.91
CTSB-203ENST00000420692 SMC4Q9NTJ3 1288 aa20.76■□□□□ 0.91
CTSB-203ENST00000420692 RRS1Q15050 365 aaKnown RBP20.76■□□□□ 0.91
CTSB-203ENST00000420692 PTPRUQ92729 1446 aa20.75■□□□□ 0.91
CTSB-203ENST00000420692 TRIM27P14373 513 aa20.75■□□□□ 0.91
CTSB-203ENST00000420692 DZIP1LQ8IYY4 767 aaKnown RBP20.75■□□□□ 0.91
CTSB-203ENST00000420692 NFE2L2Q16236 605 aa20.74■□□□□ 0.91
CTSB-203ENST00000420692 COG3Q96JB2 828 aa20.74■□□□□ 0.91
CTSB-203ENST00000420692 NBR1Q14596 966 aa20.73■□□□□ 0.91
CTSB-203ENST00000420692 PMFBP1Q8TBY8 1022 aa20.73■□□□□ 0.91
CTSB-203ENST00000420692 THUMPD2Q9BTF0 503 aaKnown RBP20.73■□□□□ 0.91
CTSB-203ENST00000420692 NOB1Q9ULX3 412 aaKnown RBP20.73■□□□□ 0.91
CTSB-203ENST00000420692 SLC26A8Q96RN1 970 aa20.72■□□□□ 0.91
CTSB-203ENST00000420692 ZNF692Q9BU19 519 aaPredicted RBP20.72■□□□□ 0.91
CTSB-203ENST00000420692 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
CTSB-203ENST00000420692 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
CTSB-203ENST00000420692 NRKQ7Z2Y5 1582 aa20.71■□□□□ 0.91
CTSB-203ENST00000420692 ATF7IPQ6VMQ6 1270 aa20.7■□□□□ 0.9
CTSB-203ENST00000420692 FTSJ3Q8IY81 847 aaKnown RBP20.7■□□□□ 0.9
CTSB-203ENST00000420692 DLG5Q8TDM6 1919 aa20.7■□□□□ 0.9
CTSB-203ENST00000420692 ACEP12821 1306 aa20.69■□□□□ 0.9
CTSB-203ENST00000420692 TTC21BQ7Z4L5 1316 aa20.69■□□□□ 0.9
CTSB-203ENST00000420692 PLEKHG3A1L390 1219 aa20.69■□□□□ 0.9
CTSB-203ENST00000420692 NUTM2FA1L443 756 aa20.69■□□□□ 0.9
CTSB-203ENST00000420692 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
CTSB-203ENST00000420692 ARHGAP23Q9P227 1491 aa20.68■□□□□ 0.9
CTSB-203ENST00000420692 USP19O94966 1318 aa20.68■□□□□ 0.9
CTSB-203ENST00000420692 SLIT1O75093 1534 aa20.67■□□□□ 0.9
CTSB-203ENST00000420692 SEC24BO95487 1268 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms