RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 L1TD1Q5T7N2 865 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-203ENST00000419007 LNPKQ9C0E8 428 aa19.14■□□□□ 0.65
SEMA3B-203ENST00000419007 POGZQ7Z3K3 1410 aa19.14■□□□□ 0.65
SEMA3B-203ENST00000419007 A0A1W2PP64 1363 aa19.14■□□□□ 0.65
SEMA3B-203ENST00000419007 FAM43AQ8N2R8 423 aa19.13■□□□□ 0.65
SEMA3B-203ENST00000419007 MCM4P33991 863 aa19.13■□□□□ 0.65
SEMA3B-203ENST00000419007 CT47B1P0C2W7 299 aaPredicted RBP19.12■□□□□ 0.65
SEMA3B-203ENST00000419007 HSCBQ8IWL3 235 aa19.12■□□□□ 0.65
SEMA3B-203ENST00000419007 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
SEMA3B-203ENST00000419007 NSD2O96028 1365 aa19.12■□□□□ 0.65
SEMA3B-203ENST00000419007 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
SEMA3B-203ENST00000419007 NEO1Q92859 1461 aa19.11■□□□□ 0.65
SEMA3B-203ENST00000419007 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-203ENST00000419007 CHMP5Q9NZZ3 219 aa19.11■□□□□ 0.65
SEMA3B-203ENST00000419007 FYB1O15117 783 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 FBLN1P23142 703 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 TERF2IPQ9NYB0 399 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 YEATS2Q9ULM3 1422 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 GOLGA6L3A6NEY3 463 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 IPO8O15397 1037 aaKnown RBP19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 IDI1Q13907 227 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 PPLO60437 1756 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 ZMYM3Q14202 1370 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 PRAM1Q96QH2 718 aa19.1■□□□□ 0.65
SEMA3B-203ENST00000419007 LMTK2Q8IWU2 1503 aa19.09■□□□□ 0.65
SEMA3B-203ENST00000419007 GLI2P10070 1586 aa19.09■□□□□ 0.65
SEMA3B-203ENST00000419007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.08■□□□□ 0.65
SEMA3B-203ENST00000419007 ZC3H13Q5T200 1668 aaKnown RBP19.08■□□□□ 0.65
SEMA3B-203ENST00000419007 ELL2O00472 640 aaPredicted RBP19.08■□□□□ 0.64
SEMA3B-203ENST00000419007 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
SEMA3B-203ENST00000419007 SMC5Q8IY18 1101 aa19.08■□□□□ 0.64
SEMA3B-203ENST00000419007 ZBTB40Q9NUA8 1239 aa19.08■□□□□ 0.64
SEMA3B-203ENST00000419007 TRAK2O60296 914 aa19.07■□□□□ 0.64
SEMA3B-203ENST00000419007 PUS7Q96PZ0 661 aaKnown RBP19.07■□□□□ 0.64
SEMA3B-203ENST00000419007 C1orf115Q9H7X2 142 aa19.07■□□□□ 0.64
SEMA3B-203ENST00000419007 KIF16BQ96L93 1317 aa19.07■□□□□ 0.64
SEMA3B-203ENST00000419007 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
SEMA3B-203ENST00000419007 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
SEMA3B-203ENST00000419007 XRCC6P12956 609 aaKnown RBP eCLIP19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 HDGFL2Q7Z4V5 671 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 PANK2Q9BZ23 570 aa19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 HMOX1P09601 288 aa19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 NCBP3Q53F19 620 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 ANKRD45Q5TZF3 282 aa19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 FOXD4L1Q9NU39 408 aa19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 HSP90AA1P07900 732 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
SEMA3B-203ENST00000419007 RRAGDQ9NQL2 400 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-203ENST00000419007 CABP1Q9NZU7 370 aa19.04■□□□□ 0.64
SEMA3B-203ENST00000419007 USP32Q8NFA0 1604 aa19.04■□□□□ 0.64
SEMA3B-203ENST00000419007 HSP90AB1P08238 724 aaKnown RBP19.03■□□□□ 0.64
SEMA3B-203ENST00000419007 CHD1LQ86WJ1 897 aa19.03■□□□□ 0.64
SEMA3B-203ENST00000419007 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
SEMA3B-203ENST00000419007 NUCB1Q02818 461 aa19.02■□□□□ 0.64
SEMA3B-203ENST00000419007 ADGRB2O60241 1585 aa19.02■□□□□ 0.63
SEMA3B-203ENST00000419007 IL16Q14005 1332 aa19.02■□□□□ 0.63
SEMA3B-203ENST00000419007 ABCC3O15438 1527 aa19.02■□□□□ 0.63
SEMA3B-203ENST00000419007 STAG3Q9UJ98 1225 aa19.01■□□□□ 0.63
SEMA3B-203ENST00000419007 CDK19Q9BWU1 502 aa19.01■□□□□ 0.63
SEMA3B-203ENST00000419007 FRMPD1Q5SYB0 1578 aa19■□□□□ 0.63
SEMA3B-203ENST00000419007 CFAP74Q9C0B2 1584 aa19■□□□□ 0.63
SEMA3B-203ENST00000419007 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
SEMA3B-203ENST00000419007 MLH3Q9UHC1 1453 aa19■□□□□ 0.63
SEMA3B-203ENST00000419007 ATAD2Q6PL18 1390 aa19■□□□□ 0.63
SEMA3B-203ENST00000419007 RSPH6AQ9H0K4 717 aa18.99■□□□□ 0.63
SEMA3B-203ENST00000419007 CAMSAP1Q5T5Y3 1602 aa18.99■□□□□ 0.63
SEMA3B-203ENST00000419007 PHACTR3Q96KR7 559 aa18.98■□□□□ 0.63
SEMA3B-203ENST00000419007 FCHSD2O94868 740 aa18.98■□□□□ 0.63
SEMA3B-203ENST00000419007 ALDH1L2Q3SY69 923 aa18.98■□□□□ 0.63
SEMA3B-203ENST00000419007 TSPYL6Q8N831 410 aa18.98■□□□□ 0.63
SEMA3B-203ENST00000419007 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
SEMA3B-203ENST00000419007 DDX11L8A8MPP1 907 aa18.97■□□□□ 0.63
SEMA3B-203ENST00000419007 NEXMIFQ5QGS0 1516 aa18.96■□□□□ 0.63
SEMA3B-203ENST00000419007 HECW2Q9P2P5 1572 aa18.96■□□□□ 0.63
SEMA3B-203ENST00000419007 SLC52A1Q9NWF4 448 aa18.96■□□□□ 0.63
SEMA3B-203ENST00000419007 COL3A1P02461 1466 aaPredicted RBP18.95■□□□□ 0.62
SEMA3B-203ENST00000419007 FSD2A1L4K1 749 aa18.95■□□□□ 0.62
SEMA3B-203ENST00000419007 RBM25P49756 843 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-203ENST00000419007 TNPO1Q92973 898 aaKnown RBP18.95■□□□□ 0.62
SEMA3B-203ENST00000419007 FBXO31Q5XUX0 539 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 SIGLEC1Q9BZZ2 1709 aa18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 ZBTB7BO15156 539 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 BMP2KLQ5H9B9 411 aa18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 WAPLQ7Z5K2 1190 aa18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 ZNF692Q9BU19 519 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-203ENST00000419007 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
SEMA3B-203ENST00000419007 VAMP4O75379 141 aa18.92■□□□□ 0.62
SEMA3B-203ENST00000419007 MRE11P49959 708 aa18.92■□□□□ 0.62
SEMA3B-203ENST00000419007 NFE2L2Q16236 605 aa18.92■□□□□ 0.62
SEMA3B-203ENST00000419007 TBC1D9Q6ZT07 1266 aa18.92■□□□□ 0.62
SEMA3B-203ENST00000419007 YTHDC2Q9H6S0 1430 aaKnown RBP18.91■□□□□ 0.62
SEMA3B-203ENST00000419007 CD2BP2O95400 341 aaKnown RBP18.91■□□□□ 0.62
SEMA3B-203ENST00000419007 GCC1Q96CN9 775 aa18.91■□□□□ 0.62
SEMA3B-203ENST00000419007 GBP4Q96PP9 640 aa18.91■□□□□ 0.62
SEMA3B-203ENST00000419007 GRPEL1Q9HAV7 217 aa18.91■□□□□ 0.62
SEMA3B-203ENST00000419007 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms