RNA–Protein interactions for RNA: ENST00000418808.1

CNOT9-203, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-203ENST00000418808 ITSN1Q15811 1721 aa11.77□□□□□ -0.52
CNOT9-203ENST00000418808 XPCQ01831 940 aaPredicted RBP11.77□□□□□ -0.53
CNOT9-203ENST00000418808 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
CNOT9-203ENST00000418808 KIF1AQ12756 1690 aa11.77□□□□□ -0.53
CNOT9-203ENST00000418808 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.53
CNOT9-203ENST00000418808 PANK3Q9H999 370 aa11.76□□□□□ -0.53
CNOT9-203ENST00000418808 PIK3C2AO00443 1686 aa11.75□□□□□ -0.53
CNOT9-203ENST00000418808 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
CNOT9-203ENST00000418808 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
CNOT9-203ENST00000418808 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
CNOT9-203ENST00000418808 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
CNOT9-203ENST00000418808 TTC21BQ7Z4L5 1316 aa11.73□□□□□ -0.53
CNOT9-203ENST00000418808 TMC1Q8TDI8 760 aa11.73□□□□□ -0.53
CNOT9-203ENST00000418808 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
CNOT9-203ENST00000418808 NSD3Q9BZ95 1437 aa11.72□□□□□ -0.53
CNOT9-203ENST00000418808 SPATA31A3Q5VYP0 1347 aa11.72□□□□□ -0.53
CNOT9-203ENST00000418808 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
CNOT9-203ENST00000418808 DDX10Q13206 875 aaKnown RBP11.72□□□□□ -0.53
CNOT9-203ENST00000418808 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
CNOT9-203ENST00000418808 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
CNOT9-203ENST00000418808 USP54Q70EL1 1684 aa11.71□□□□□ -0.53
CNOT9-203ENST00000418808 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.53
CNOT9-203ENST00000418808 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.53
CNOT9-203ENST00000418808 EDC4Q6P2E9 1401 aaKnown RBP11.71□□□□□ -0.53
CNOT9-203ENST00000418808 SBNO1A3KN83 1393 aa11.71□□□□□ -0.53
CNOT9-203ENST00000418808 KTN1Q86UP2 1357 aaKnown RBP11.71□□□□□ -0.53
CNOT9-203ENST00000418808 FYB1O15117 783 aa11.71□□□□□ -0.53
CNOT9-203ENST00000418808 CDCA8Q53HL2 280 aa11.71□□□□□ -0.53
CNOT9-203ENST00000418808 NME9Q86XW9 330 aa11.71□□□□□ -0.53
CNOT9-203ENST00000418808 USP31Q70CQ4 1352 aa11.7□□□□□ -0.54
CNOT9-203ENST00000418808 FBLN1P23142 703 aa11.7□□□□□ -0.54
CNOT9-203ENST00000418808 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
CNOT9-203ENST00000418808 NPHP3Q7Z494 1330 aa11.69□□□□□ -0.54
CNOT9-203ENST00000418808 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
CNOT9-203ENST00000418808 PHLPP1O60346 1717 aa11.69□□□□□ -0.54
CNOT9-203ENST00000418808 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
CNOT9-203ENST00000418808 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
CNOT9-203ENST00000418808 USP19O94966 1318 aa11.68□□□□□ -0.54
CNOT9-203ENST00000418808 RGS17Q9UGC6 210 aaPredicted RBP11.68□□□□□ -0.54
CNOT9-203ENST00000418808 SLIT3O75094 1523 aa11.68□□□□□ -0.54
CNOT9-203ENST00000418808 NFAT5O94916 1531 aa11.67□□□□□ -0.54
CNOT9-203ENST00000418808 ABCA3Q99758 1704 aa11.67□□□□□ -0.54
CNOT9-203ENST00000418808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.54
CNOT9-203ENST00000418808 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
CNOT9-203ENST00000418808 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
CNOT9-203ENST00000418808 LRP6O75581 1613 aa11.67□□□□□ -0.54
CNOT9-203ENST00000418808 PSME1Q06323 249 aa11.66□□□□□ -0.54
CNOT9-203ENST00000418808 NUTM2GQ5VZR2 741 aa11.66□□□□□ -0.54
CNOT9-203ENST00000418808 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
CNOT9-203ENST00000418808 GGNBP2Q9H3C7 697 aa11.66□□□□□ -0.54
CNOT9-203ENST00000418808 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
CNOT9-203ENST00000418808 JCADQ9P266 1359 aa11.66□□□□□ -0.54
CNOT9-203ENST00000418808 NPC1L1Q9UHC9 1359 aa11.66□□□□□ -0.54
CNOT9-203ENST00000418808 PHRF1Q9P1Y6 1649 aaKnown RBP11.64□□□□□ -0.55
CNOT9-203ENST00000418808 TTC21AQ8NDW8 1320 aa11.64□□□□□ -0.55
CNOT9-203ENST00000418808 HDGFL2Q7Z4V5 671 aaPredicted RBP11.64□□□□□ -0.55
CNOT9-203ENST00000418808 KIF20BQ96Q89 1820 aa11.64□□□□□ -0.55
CNOT9-203ENST00000418808 SHPRHQ149N8 1683 aa11.64□□□□□ -0.55
CNOT9-203ENST00000418808 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
CNOT9-203ENST00000418808 PARD3Q8TEW0 1356 aa11.63□□□□□ -0.55
CNOT9-203ENST00000418808 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
CNOT9-203ENST00000418808 COL18A1P39060 1754 aa11.62□□□□□ -0.55
CNOT9-203ENST00000418808 SPATA31A6Q5VVP1 1343 aa11.61□□□□□ -0.55
CNOT9-203ENST00000418808 ABTB2Q8N961 1025 aa11.61□□□□□ -0.55
CNOT9-203ENST00000418808 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
CNOT9-203ENST00000418808 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
CNOT9-203ENST00000418808 NLRP6P59044 892 aa11.6□□□□□ -0.55
CNOT9-203ENST00000418808 CCDC184Q52MB2 194 aa11.6□□□□□ -0.55
CNOT9-203ENST00000418808 CC2D1BQ5T0F9 858 aaKnown RBP11.6□□□□□ -0.55
CNOT9-203ENST00000418808 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
CNOT9-203ENST00000418808 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
CNOT9-203ENST00000418808 CGNL1Q0VF96 1302 aa11.6□□□□□ -0.55
CNOT9-203ENST00000418808 LMO7Q8WWI1 1683 aa11.59□□□□□ -0.55
CNOT9-203ENST00000418808 ARHGEF10O15013 1369 aa11.59□□□□□ -0.55
CNOT9-203ENST00000418808 GCP02774 474 aa11.59□□□□□ -0.55
CNOT9-203ENST00000418808 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
CNOT9-203ENST00000418808 NSD2O96028 1365 aa11.58□□□□□ -0.56
CNOT9-203ENST00000418808 ARHGEF25Q86VW2 580 aa11.58□□□□□ -0.56
CNOT9-203ENST00000418808 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
CNOT9-203ENST00000418808 PRKRIP1Q9H875 184 aaPredicted RBP11.58□□□□□ -0.56
CNOT9-203ENST00000418808 POLKQ9UBT6 870 aa11.58□□□□□ -0.56
CNOT9-203ENST00000418808 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
CNOT9-203ENST00000418808 KNSTRNQ9Y448 316 aa11.58□□□□□ -0.56
CNOT9-203ENST00000418808 MAP3K19Q56UN5 1328 aa11.58□□□□□ -0.56
CNOT9-203ENST00000418808 CPDO75976 1380 aa11.57□□□□□ -0.56
CNOT9-203ENST00000418808 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
CNOT9-203ENST00000418808 CAMTA1Q9Y6Y1 1673 aa11.57□□□□□ -0.56
CNOT9-203ENST00000418808 RRS1Q15050 365 aaKnown RBP11.57□□□□□ -0.56
CNOT9-203ENST00000418808 ZNF772Q68DY9 489 aaPredicted RBP11.57□□□□□ -0.56
CNOT9-203ENST00000418808 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
CNOT9-203ENST00000418808 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
CNOT9-203ENST00000418808 KIAA0232Q92628 1395 aa11.56□□□□□ -0.56
CNOT9-203ENST00000418808 FAM83GA6ND36 823 aa11.56□□□□□ -0.56
CNOT9-203ENST00000418808 PLEKHG5O94827 1062 aa11.56□□□□□ -0.56
CNOT9-203ENST00000418808 NLRP13Q86W25 1043 aa11.56□□□□□ -0.56
CNOT9-203ENST00000418808 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
CNOT9-203ENST00000418808 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
CNOT9-203ENST00000418808 LMOD2Q6P5Q4 547 aa11.55□□□□□ -0.56
CNOT9-203ENST00000418808 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
CNOT9-203ENST00000418808 ZC3H6P61129 1189 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms