RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 PDZRN3Q9UPQ7 1066 aa26.08■■□□□ 1.77
KRT3-201ENST00000417996 COL3A1P02461 1466 aaPredicted RBP26.08■■□□□ 1.76
KRT3-201ENST00000417996 CD163L1Q9NR16 1453 aa26.08■■□□□ 1.76
KRT3-201ENST00000417996 MVPQ14764 893 aaKnown RBP26.08■■□□□ 1.76
KRT3-201ENST00000417996 FTSJ3Q8IY81 847 aaKnown RBP26.08■■□□□ 1.76
KRT3-201ENST00000417996 TRIM35Q9UPQ4 493 aa26.08■■□□□ 1.76
KRT3-201ENST00000417996 RWDD1Q9H446 243 aaPredicted RBP26.06■■□□□ 1.76
KRT3-201ENST00000417996 SMC4Q9NTJ3 1288 aa26.06■■□□□ 1.76
KRT3-201ENST00000417996 DZIP1LQ8IYY4 767 aaKnown RBP26.05■■□□□ 1.76
KRT3-201ENST00000417996 CDK19Q9BWU1 502 aa26.05■■□□□ 1.76
KRT3-201ENST00000417996 STAG3Q9UJ98 1225 aa26.04■■□□□ 1.76
KRT3-201ENST00000417996 HDGFL2Q7Z4V5 671 aaPredicted RBP26.04■■□□□ 1.76
KRT3-201ENST00000417996 CABP1Q9NZU7 370 aa26.03■■□□□ 1.76
KRT3-201ENST00000417996 NLRP1Q9C000 1473 aa26.03■■□□□ 1.76
KRT3-201ENST00000417996 CT47B1P0C2W7 299 aaPredicted RBP26.02■■□□□ 1.76
KRT3-201ENST00000417996 ANKRD26Q9UPS8 1709 aa26.02■■□□□ 1.76
KRT3-201ENST00000417996 DIAPH1O60610 1272 aaKnown RBP26.02■■□□□ 1.76
KRT3-201ENST00000417996 RIPK4P57078 832 aa26.02■■□□□ 1.76
KRT3-201ENST00000417996 CLTCQ00610 1675 aaKnown RBP26.01■■□□□ 1.75
KRT3-201ENST00000417996 ALKQ9UM73 1620 aa26.01■■□□□ 1.75
KRT3-201ENST00000417996 SSH1Q8WYL5 1049 aa26■■□□□ 1.75
KRT3-201ENST00000417996 MED14O60244 1454 aa26■■□□□ 1.75
KRT3-201ENST00000417996 TRIM27P14373 513 aa25.99■■□□□ 1.75
KRT3-201ENST00000417996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.98■■□□□ 1.75
KRT3-201ENST00000417996 FRAT2O75474 233 aaPredicted RBP25.97■■□□□ 1.75
KRT3-201ENST00000417996 GSE1Q14687 1217 aa25.97■■□□□ 1.75
KRT3-201ENST00000417996 ITPRIPQ8IWB1 547 aa25.97■■□□□ 1.75
KRT3-201ENST00000417996 FBLN1P23142 703 aa25.96■■□□□ 1.75
KRT3-201ENST00000417996 ARHGEF40Q8TER5 1519 aa25.96■■□□□ 1.75
KRT3-201ENST00000417996 NOB1Q9ULX3 412 aaKnown RBP25.96■■□□□ 1.75
KRT3-201ENST00000417996 WAPLQ7Z5K2 1190 aa25.95■■□□□ 1.74
KRT3-201ENST00000417996 ATF7IPQ6VMQ6 1270 aa25.94■■□□□ 1.74
KRT3-201ENST00000417996 IL16Q14005 1332 aa25.94■■□□□ 1.74
KRT3-201ENST00000417996 PNPLA6Q8IY17 1366 aa25.93■■□□□ 1.74
KRT3-201ENST00000417996 UPF2Q9HAU5 1272 aaKnown RBP25.93■■□□□ 1.74
KRT3-201ENST00000417996 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
KRT3-201ENST00000417996 BECN1Q14457 450 aa25.93■■□□□ 1.74
KRT3-201ENST00000417996 PNNQ9H307 717 aaKnown RBP25.92■■□□□ 1.74
KRT3-201ENST00000417996 ZMYM3Q14202 1370 aa25.92■■□□□ 1.74
KRT3-201ENST00000417996 DDX19BQ9UMR2 479 aa25.92■■□□□ 1.74
KRT3-201ENST00000417996 PRKAR2BP31323 418 aa25.89■■□□□ 1.74
KRT3-201ENST00000417996 FAM69CQ0P6D2 419 aa25.89■■□□□ 1.74
KRT3-201ENST00000417996 TMEM57Q8N5G2 664 aa25.89■■□□□ 1.74
KRT3-201ENST00000417996 IL27Q8NEV9 243 aa25.89■■□□□ 1.74
KRT3-201ENST00000417996 TBC1D32Q96NH3 1257 aa25.89■■□□□ 1.74
KRT3-201ENST00000417996 FCHSD2O94868 740 aa25.88■■□□□ 1.73
KRT3-201ENST00000417996 POLKQ9UBT6 870 aa25.88■■□□□ 1.73
KRT3-201ENST00000417996 LRRC7Q96NW7 1537 aa25.88■■□□□ 1.73
KRT3-201ENST00000417996 SLKQ9H2G2 1235 aaPredicted RBP25.88■■□□□ 1.73
KRT3-201ENST00000417996 HDAC1Q13547 482 aaPredicted RBP25.87■■□□□ 1.73
KRT3-201ENST00000417996 RSPH6AQ9H0K4 717 aa25.87■■□□□ 1.73
KRT3-201ENST00000417996 HMOX1P09601 288 aa25.85■■□□□ 1.73
KRT3-201ENST00000417996 KIF16BQ96L93 1317 aa25.85■■□□□ 1.73
KRT3-201ENST00000417996 A2ML1A8K2U0 1454 aa25.84■■□□□ 1.73
KRT3-201ENST00000417996 MLECQ14165 292 aa25.84■■□□□ 1.73
KRT3-201ENST00000417996 RIMS2Q9UQ26 1411 aa25.83■■□□□ 1.73
KRT3-201ENST00000417996 IPO8O15397 1037 aaKnown RBP25.83■■□□□ 1.73
KRT3-201ENST00000417996 FAM135BQ49AJ0 1406 aa25.82■■□□□ 1.72
KRT3-201ENST00000417996 PHACTR3Q96KR7 559 aa25.82■■□□□ 1.72
KRT3-201ENST00000417996 CDC42BPGQ6DT37 1551 aa25.82■■□□□ 1.72
KRT3-201ENST00000417996 ZBTB40Q9NUA8 1239 aa25.82■■□□□ 1.72
KRT3-201ENST00000417996 ATP7BP35670 1465 aa25.82■■□□□ 1.72
KRT3-201ENST00000417996 THUMPD2Q9BTF0 503 aaKnown RBP25.81■■□□□ 1.72
KRT3-201ENST00000417996 EMILIN1Q9Y6C2 1016 aa25.81■■□□□ 1.72
KRT3-201ENST00000417996 TSPOAP1O95153 1857 aa25.81■■□□□ 1.72
KRT3-201ENST00000417996 DLC1Q96QB1 1528 aa25.81■■□□□ 1.72
KRT3-201ENST00000417996 ALDH1L2Q3SY69 923 aa25.8■■□□□ 1.72
KRT3-201ENST00000417996 TBC1D2Q9BYX2 928 aa25.8■■□□□ 1.72
KRT3-201ENST00000417996 NME9Q86XW9 330 aa25.79■■□□□ 1.72
KRT3-201ENST00000417996 MFAP1P55081 439 aaKnown RBP25.79■■□□□ 1.72
KRT3-201ENST00000417996 SMC5Q8IY18 1101 aa25.79■■□□□ 1.72
KRT3-201ENST00000417996 ZRANB1Q9UGI0 708 aa25.79■■□□□ 1.72
KRT3-201ENST00000417996 MAP2P11137 1827 aaKnown RBP25.78■■□□□ 1.72
KRT3-201ENST00000417996 NFE2L2Q16236 605 aa25.78■■□□□ 1.72
KRT3-201ENST00000417996 RTN4Q9NQC3 1192 aaKnown RBP25.77■■□□□ 1.72
KRT3-201ENST00000417996 PPIP5K1Q6PFW1 1433 aa25.76■■□□□ 1.72
KRT3-201ENST00000417996 SETD1AO15047 1707 aaKnown RBP25.76■■□□□ 1.71
KRT3-201ENST00000417996 BRPF3Q9ULD4 1205 aa25.76■■□□□ 1.71
KRT3-201ENST00000417996 SPATA31D1Q6ZQQ2 1576 aa25.75■■□□□ 1.71
KRT3-201ENST00000417996 WASLO00401 505 aaPredicted RBP25.75■■□□□ 1.71
KRT3-201ENST00000417996 PPP6R1Q9UPN7 881 aa25.75■■□□□ 1.71
KRT3-201ENST00000417996 TXNDC2Q86VQ3 553 aa25.75■■□□□ 1.71
KRT3-201ENST00000417996 C22orf23Q9BZE7 217 aa25.75■■□□□ 1.71
KRT3-201ENST00000417996 ANTXR1Q9H6X2 564 aa25.75■■□□□ 1.71
KRT3-201ENST00000417996 NCKAP5LQ9HCH0 1330 aa25.74■■□□□ 1.71
KRT3-201ENST00000417996 DIP2BQ9P265 1576 aa25.74■■□□□ 1.71
KRT3-201ENST00000417996 SPRYD3Q8NCJ5 442 aa25.74■■□□□ 1.71
KRT3-201ENST00000417996 AGLP35573 1532 aa25.73■■□□□ 1.71
KRT3-201ENST00000417996 IL13P35225 146 aa25.73■■□□□ 1.71
KRT3-201ENST00000417996 TSPYL6Q8N831 410 aa25.73■■□□□ 1.71
KRT3-201ENST00000417996 EDC4Q6P2E9 1401 aaKnown RBP25.73■■□□□ 1.71
KRT3-201ENST00000417996 METP08581 1390 aa25.73■■□□□ 1.71
KRT3-201ENST00000417996 ELL2O00472 640 aaPredicted RBP25.72■■□□□ 1.71
KRT3-201ENST00000417996 CPSF1Q10570 1443 aaKnown RBP25.72■■□□□ 1.71
KRT3-201ENST00000417996 VAMP4O75379 141 aa25.71■■□□□ 1.71
KRT3-201ENST00000417996 LNPKQ9C0E8 428 aa25.71■■□□□ 1.71
KRT3-201ENST00000417996 REREQ9P2R6 1566 aa25.71■■□□□ 1.71
KRT3-201ENST00000417996 NUCB1Q02818 461 aa25.71■■□□□ 1.71
KRT3-201ENST00000417996 RRS1Q15050 365 aaKnown RBP25.7■■□□□ 1.71
KRT3-201ENST00000417996 MRPL50Q8N5N7 158 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms