RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 DESI1Q6ICB0 168 aa8.94□□□□□ -0.98
ATG4AP1-201ENST00000416893 TBC1D2Q9BYX2 928 aa8.94□□□□□ -0.98
ATG4AP1-201ENST00000416893 GJA5P36382 358 aa8.93□□□□□ -0.98
ATG4AP1-201ENST00000416893 NFX1Q12986 1120 aaKnown RBP8.93□□□□□ -0.98
ATG4AP1-201ENST00000416893 DIXDC1Q155Q3 683 aa8.93□□□□□ -0.98
ATG4AP1-201ENST00000416893 KIFC2Q96AC6 838 aa8.93□□□□□ -0.98
ATG4AP1-201ENST00000416893 WASF2Q9Y6W5 498 aa8.93□□□□□ -0.98
ATG4AP1-201ENST00000416893 CECR2Q9BXF3 1484 aa8.93□□□□□ -0.98
ATG4AP1-201ENST00000416893 PRKCSHP14314 528 aaPredicted RBP8.92□□□□□ -0.98
ATG4AP1-201ENST00000416893 LINC01559Q495D7 138 aa8.92□□□□□ -0.98
ATG4AP1-201ENST00000416893 RSBN1LQ6PCB5 846 aaPredicted RBP8.92□□□□□ -0.98
ATG4AP1-201ENST00000416893 BAP1Q92560 729 aa8.92□□□□□ -0.98
ATG4AP1-201ENST00000416893 PCDHB15Q9Y5E8 787 aa8.9□□□□□ -0.98
ATG4AP1-201ENST00000416893 SPTLC1O15269 473 aa8.89□□□□□ -0.99
ATG4AP1-201ENST00000416893 ZNF511Q8NB15 262 aa8.89□□□□□ -0.99
ATG4AP1-201ENST00000416893 SMARCA4P51532 1647 aa8.88□□□□□ -0.99
ATG4AP1-201ENST00000416893 CAPN5O15484 640 aaPredicted RBP8.88□□□□□ -0.99
ATG4AP1-201ENST00000416893 VARSP26640 1264 aaKnown RBP8.88□□□□□ -0.99
ATG4AP1-201ENST00000416893 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
ATG4AP1-201ENST00000416893 TLL2Q9Y6L7 1015 aa8.88□□□□□ -0.99
ATG4AP1-201ENST00000416893 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
ATG4AP1-201ENST00000416893 TERTO14746 1132 aaKnown RBP8.87□□□□□ -0.99
ATG4AP1-201ENST00000416893 HRCP23327 699 aa8.87□□□□□ -0.99
ATG4AP1-201ENST00000416893 CTHP32929 405 aa8.87□□□□□ -0.99
ATG4AP1-201ENST00000416893 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
ATG4AP1-201ENST00000416893 BAZ1AQ9NRL2 1556 aaPredicted RBP8.86□□□□□ -0.99
ATG4AP1-201ENST00000416893 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
ATG4AP1-201ENST00000416893 BMP1P13497 986 aa8.86□□□□□ -0.99
ATG4AP1-201ENST00000416893 TRIM46Q7Z4K8 759 aa8.86□□□□□ -0.99
ATG4AP1-201ENST00000416893 RIC3Q7Z5B4 369 aa8.86□□□□□ -0.99
ATG4AP1-201ENST00000416893 WIPF1O43516 503 aa8.85□□□□□ -0.99
ATG4AP1-201ENST00000416893 PRPF38BQ5VTL8 546 aaKnown RBP8.85□□□□□ -0.99
ATG4AP1-201ENST00000416893 MPNDQ8N594 471 aa8.85□□□□□ -0.99
ATG4AP1-201ENST00000416893 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
ATG4AP1-201ENST00000416893 F12P00748 615 aaPredicted RBP8.83□□□□□ -1
ATG4AP1-201ENST00000416893 NNTQ13423 1086 aa8.83□□□□□ -1
ATG4AP1-201ENST00000416893 CSPP1Q1MSJ5 1256 aa8.83□□□□□ -1
ATG4AP1-201ENST00000416893 LCE2CQ5TA81 110 aa8.83□□□□□ -1
ATG4AP1-201ENST00000416893 MAP10Q9P2G4 905 aa8.83□□□□□ -1
ATG4AP1-201ENST00000416893 ATAD2BQ9ULI0 1458 aa8.83□□□□□ -1
ATG4AP1-201ENST00000416893 MROH2BQ7Z745 1585 aa8.82□□□□□ -1
ATG4AP1-201ENST00000416893 SMARCA2P51531 1590 aa8.82□□□□□ -1
ATG4AP1-201ENST00000416893 INSM1Q01101 510 aaPredicted RBP8.81□□□□□ -1
ATG4AP1-201ENST00000416893 FAM174AQ8TBP5 190 aa8.81□□□□□ -1
ATG4AP1-201ENST00000416893 MYSM1Q5VVJ2 828 aa8.8□□□□□ -1
ATG4AP1-201ENST00000416893 FOXJ1Q92949 421 aa8.8□□□□□ -1
ATG4AP1-201ENST00000416893 RSPH6AQ9H0K4 717 aa8.8□□□□□ -1
ATG4AP1-201ENST00000416893 LIMD1Q9UGP4 676 aa8.8□□□□□ -1
ATG4AP1-201ENST00000416893 NCAPD3P42695 1498 aa8.8□□□□□ -1
ATG4AP1-201ENST00000416893 PEG3Q9GZU2 1588 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
ATG4AP1-201ENST00000416893 ADH1CP00326 375 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 TUSC1Q2TAM9 212 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 SLC16A10Q8TF71 515 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 DDRGK1Q96HY6 314 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 ZFP42Q96MM3 310 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 NXF1Q9UBU9 619 aaKnown RBP8.79□□□□□ -1
ATG4AP1-201ENST00000416893 HMGXB3Q12766 1538 aa8.79□□□□□ -1
ATG4AP1-201ENST00000416893 NUTM2BA6NNL0 878 aaPredicted RBP8.78□□□□□ -1
ATG4AP1-201ENST00000416893 NUTM2EB1AL46 878 aaPredicted RBP8.78□□□□□ -1
ATG4AP1-201ENST00000416893 TIMP2P16035 220 aa8.78□□□□□ -1
ATG4AP1-201ENST00000416893 WDR4P57081 412 aaKnown RBP8.78□□□□□ -1
ATG4AP1-201ENST00000416893 QPCTQ16769 361 aa8.78□□□□□ -1
ATG4AP1-201ENST00000416893 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
ATG4AP1-201ENST00000416893 NUTM2AQ8IVF1 878 aaPredicted RBP8.78□□□□□ -1
ATG4AP1-201ENST00000416893 TSC1Q92574 1164 aa8.78□□□□□ -1
ATG4AP1-201ENST00000416893 CDK15Q96Q40 435 aa8.78□□□□□ -1
ATG4AP1-201ENST00000416893 GPBP1L1Q9HC44 474 aaPredicted RBP8.78□□□□□ -1
ATG4AP1-201ENST00000416893 STK17AQ9UEE5 414 aa8.78□□□□□ -1
ATG4AP1-201ENST00000416893 LILRB3O75022 631 aa8.77□□□□□ -1.01
ATG4AP1-201ENST00000416893 MRPL14Q6P1L8 145 aaKnown RBP8.77□□□□□ -1.01
ATG4AP1-201ENST00000416893 ARID5BQ14865 1188 aa8.76□□□□□ -1.01
ATG4AP1-201ENST00000416893 AGERQ15109 404 aa8.76□□□□□ -1.01
ATG4AP1-201ENST00000416893 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
ATG4AP1-201ENST00000416893 NPAS3Q8IXF0 933 aa8.76□□□□□ -1.01
ATG4AP1-201ENST00000416893 KLF16Q9BXK1 252 aaPredicted RBP8.76□□□□□ -1.01
ATG4AP1-201ENST00000416893 BAZ1BQ9UIG0 1483 aaKnown RBP8.76□□□□□ -1.01
ATG4AP1-201ENST00000416893 SCARF1Q14162 830 aa8.75□□□□□ -1.01
ATG4AP1-201ENST00000416893 BPHLQ86WA6 291 aaPredicted RBP8.75□□□□□ -1.01
ATG4AP1-201ENST00000416893 ARMC2Q8NEN0 867 aa8.74□□□□□ -1.01
ATG4AP1-201ENST00000416893 PURBQ96QR8 312 aaKnown RBP8.74□□□□□ -1.01
ATG4AP1-201ENST00000416893 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
ATG4AP1-201ENST00000416893 NR5A1Q13285 461 aa8.73□□□□□ -1.01
ATG4AP1-201ENST00000416893 RTL5Q5HYW3 569 aaPredicted RBP8.73□□□□□ -1.01
ATG4AP1-201ENST00000416893 HELBQ8NG08 1087 aaPredicted RBP8.73□□□□□ -1.01
ATG4AP1-201ENST00000416893 WIZO95785 1651 aa8.72□□□□□ -1.01
ATG4AP1-201ENST00000416893 ZIC2O95409 532 aaPredicted RBP8.72□□□□□ -1.01
ATG4AP1-201ENST00000416893 NR3C2P08235 984 aa8.72□□□□□ -1.01
ATG4AP1-201ENST00000416893 VEGFBP49765 207 aa8.72□□□□□ -1.01
ATG4AP1-201ENST00000416893 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
ATG4AP1-201ENST00000416893 IRF7Q92985 503 aa8.72□□□□□ -1.01
ATG4AP1-201ENST00000416893 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.01
ATG4AP1-201ENST00000416893 H3BM21 787 aa8.71□□□□□ -1.02
ATG4AP1-201ENST00000416893 GMPRP36959 345 aa8.71□□□□□ -1.02
ATG4AP1-201ENST00000416893 GRM5P41594 1212 aa8.71□□□□□ -1.02
ATG4AP1-201ENST00000416893 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
ATG4AP1-201ENST00000416893 ITPKCQ96DU7 683 aa8.71□□□□□ -1.02
ATG4AP1-201ENST00000416893 FAM117AQ9C073 453 aa8.71□□□□□ -1.02
ATG4AP1-201ENST00000416893 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms