RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 IGHDP01880 384 aa12.83□□□□□ -0.36
LINC00494-201ENST00000416742 RIPK4P57078 832 aa12.83□□□□□ -0.36
LINC00494-201ENST00000416742 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.36
LINC00494-201ENST00000416742 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
LINC00494-201ENST00000416742 METP08581 1390 aa12.83□□□□□ -0.36
LINC00494-201ENST00000416742 IQSEC2Q5JU85 1478 aa12.83□□□□□ -0.36
LINC00494-201ENST00000416742 PLEKHF1Q96S99 279 aa12.82□□□□□ -0.36
LINC00494-201ENST00000416742 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
LINC00494-201ENST00000416742 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
LINC00494-201ENST00000416742 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
LINC00494-201ENST00000416742 NUTM2FA1L443 756 aa12.82□□□□□ -0.36
LINC00494-201ENST00000416742 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
LINC00494-201ENST00000416742 NEFMP07197 916 aa12.81□□□□□ -0.36
LINC00494-201ENST00000416742 NME9Q86XW9 330 aa12.81□□□□□ -0.36
LINC00494-201ENST00000416742 NUDT16Q96DE0 195 aaKnown RBP12.81□□□□□ -0.36
LINC00494-201ENST00000416742 RLBP1P12271 317 aa12.81□□□□□ -0.36
LINC00494-201ENST00000416742 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
LINC00494-201ENST00000416742 HMOX1P09601 288 aa12.8□□□□□ -0.36
LINC00494-201ENST00000416742 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
LINC00494-201ENST00000416742 POLKQ9UBT6 870 aa12.8□□□□□ -0.36
LINC00494-201ENST00000416742 LAS1LQ9Y4W2 734 aaKnown RBP12.8□□□□□ -0.36
LINC00494-201ENST00000416742 TNRQ92752 1358 aa12.8□□□□□ -0.36
LINC00494-201ENST00000416742 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
LINC00494-201ENST00000416742 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
LINC00494-201ENST00000416742 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
LINC00494-201ENST00000416742 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
LINC00494-201ENST00000416742 FAM161AQ3B820 660 aa12.79□□□□□ -0.36
LINC00494-201ENST00000416742 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
LINC00494-201ENST00000416742 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
LINC00494-201ENST00000416742 PPIP5K1Q6PFW1 1433 aa12.78□□□□□ -0.36
LINC00494-201ENST00000416742 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
LINC00494-201ENST00000416742 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
LINC00494-201ENST00000416742 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.36
LINC00494-201ENST00000416742 FCHSD2O94868 740 aa12.77□□□□□ -0.37
LINC00494-201ENST00000416742 COG3Q96JB2 828 aa12.77□□□□□ -0.37
LINC00494-201ENST00000416742 RRS1Q15050 365 aaKnown RBP12.76□□□□□ -0.37
LINC00494-201ENST00000416742 SLC26A8Q96RN1 970 aa12.76□□□□□ -0.37
LINC00494-201ENST00000416742 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
LINC00494-201ENST00000416742 MED14O60244 1454 aa12.76□□□□□ -0.37
LINC00494-201ENST00000416742 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
LINC00494-201ENST00000416742 DLC1Q96QB1 1528 aa12.76□□□□□ -0.37
LINC00494-201ENST00000416742 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
LINC00494-201ENST00000416742 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
LINC00494-201ENST00000416742 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
LINC00494-201ENST00000416742 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
LINC00494-201ENST00000416742 KIF13AQ9H1H9 1805 aa12.75□□□□□ -0.37
LINC00494-201ENST00000416742 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
LINC00494-201ENST00000416742 LTKP29376 864 aa12.75□□□□□ -0.37
LINC00494-201ENST00000416742 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
LINC00494-201ENST00000416742 THUMPD2Q9BTF0 503 aaKnown RBP12.75□□□□□ -0.37
LINC00494-201ENST00000416742 RSPH6AQ9H0K4 717 aa12.74□□□□□ -0.37
LINC00494-201ENST00000416742 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
LINC00494-201ENST00000416742 ATP7BP35670 1465 aa12.74□□□□□ -0.37
LINC00494-201ENST00000416742 SOX12O15370 315 aa12.73□□□□□ -0.37
LINC00494-201ENST00000416742 CT47B1P0C2W7 299 aaPredicted RBP12.73□□□□□ -0.37
LINC00494-201ENST00000416742 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
LINC00494-201ENST00000416742 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
LINC00494-201ENST00000416742 DAXXQ9UER7 740 aaPredicted RBP12.73□□□□□ -0.37
LINC00494-201ENST00000416742 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
LINC00494-201ENST00000416742 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
LINC00494-201ENST00000416742 EDC4Q6P2E9 1401 aaKnown RBP12.73□□□□□ -0.37
LINC00494-201ENST00000416742 PRR36Q9H6K5 1346 aa12.72□□□□□ -0.37
LINC00494-201ENST00000416742 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
LINC00494-201ENST00000416742 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
LINC00494-201ENST00000416742 IL16Q14005 1332 aa12.72□□□□□ -0.37
LINC00494-201ENST00000416742 RWDD1Q9H446 243 aaPredicted RBP12.72□□□□□ -0.37
LINC00494-201ENST00000416742 ROBO2Q9HCK4 1378 aa12.72□□□□□ -0.37
LINC00494-201ENST00000416742 TRIM27P14373 513 aa12.72□□□□□ -0.37
LINC00494-201ENST00000416742 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
LINC00494-201ENST00000416742 CPSF1Q10570 1443 aaKnown RBP12.72□□□□□ -0.37
LINC00494-201ENST00000416742 ANKRD26Q9UPS8 1709 aa12.71□□□□□ -0.37
LINC00494-201ENST00000416742 ELL2O00472 640 aaPredicted RBP12.71□□□□□ -0.37
LINC00494-201ENST00000416742 NFE2L2Q16236 605 aa12.71□□□□□ -0.37
LINC00494-201ENST00000416742 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
LINC00494-201ENST00000416742 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
LINC00494-201ENST00000416742 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.37
LINC00494-201ENST00000416742 IL13P35225 146 aa12.71□□□□□ -0.37
LINC00494-201ENST00000416742 NRXN3Q9Y4C0 1643 aa12.71□□□□□ -0.38
LINC00494-201ENST00000416742 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.38
LINC00494-201ENST00000416742 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.38
LINC00494-201ENST00000416742 SETD1AO15047 1707 aaKnown RBP12.7□□□□□ -0.38
LINC00494-201ENST00000416742 AAMPQ13685 434 aa12.7□□□□□ -0.38
LINC00494-201ENST00000416742 ATF7IPQ6VMQ6 1270 aa12.7□□□□□ -0.38
LINC00494-201ENST00000416742 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
LINC00494-201ENST00000416742 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
LINC00494-201ENST00000416742 ACEP12821 1306 aa12.69□□□□□ -0.38
LINC00494-201ENST00000416742 TMEM57Q8N5G2 664 aa12.68□□□□□ -0.38
LINC00494-201ENST00000416742 CPS1P31327 1500 aa12.68□□□□□ -0.38
LINC00494-201ENST00000416742 IPO8O15397 1037 aaKnown RBP12.68□□□□□ -0.38
LINC00494-201ENST00000416742 LRRC7Q96NW7 1537 aa12.68□□□□□ -0.38
LINC00494-201ENST00000416742 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
LINC00494-201ENST00000416742 AMOTL2Q9Y2J4 779 aa12.68□□□□□ -0.38
LINC00494-201ENST00000416742 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
LINC00494-201ENST00000416742 ADAMTS13Q76LX8 1427 aa12.67□□□□□ -0.38
LINC00494-201ENST00000416742 TTC21BQ7Z4L5 1316 aa12.67□□□□□ -0.38
LINC00494-201ENST00000416742 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
LINC00494-201ENST00000416742 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
LINC00494-201ENST00000416742 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
LINC00494-201ENST00000416742 TECPR2O15040 1411 aa12.66□□□□□ -0.38
LINC00494-201ENST00000416742 GNAI1P63096 354 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms