RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
MECP2-204ENST00000415944 NUDT16Q96DE0 195 aaKnown RBP11.45□□□□□ -0.58
MECP2-204ENST00000415944 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
MECP2-204ENST00000415944 PHLPP1O60346 1717 aa11.45□□□□□ -0.58
MECP2-204ENST00000415944 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
MECP2-204ENST00000415944 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
MECP2-204ENST00000415944 ORAI2Q96SN7 254 aa11.44□□□□□ -0.58
MECP2-204ENST00000415944 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
MECP2-204ENST00000415944 COL16A1Q07092 1604 aaPredicted RBP11.44□□□□□ -0.58
MECP2-204ENST00000415944 PPIP5K1Q6PFW1 1433 aa11.43□□□□□ -0.58
MECP2-204ENST00000415944 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
MECP2-204ENST00000415944 TRPM3Q9HCF6 1732 aaPredicted RBP11.43□□□□□ -0.58
MECP2-204ENST00000415944 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
MECP2-204ENST00000415944 CGNL1Q0VF96 1302 aa11.43□□□□□ -0.58
MECP2-204ENST00000415944 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
MECP2-204ENST00000415944 ESCO1Q5FWF5 840 aa11.43□□□□□ -0.58
MECP2-204ENST00000415944 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
MECP2-204ENST00000415944 PXDNQ92626 1479 aa11.43□□□□□ -0.58
MECP2-204ENST00000415944 PLEKHG3A1L390 1219 aa11.42□□□□□ -0.58
MECP2-204ENST00000415944 PPP2R1AP30153 589 aa11.42□□□□□ -0.58
MECP2-204ENST00000415944 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
MECP2-204ENST00000415944 CD163L1Q9NR16 1453 aa11.41□□□□□ -0.58
MECP2-204ENST00000415944 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
MECP2-204ENST00000415944 NPHP3Q7Z494 1330 aa11.4□□□□□ -0.58
MECP2-204ENST00000415944 ALS2Q96Q42 1657 aa11.4□□□□□ -0.58
MECP2-204ENST00000415944 CC2D1BQ5T0F9 858 aaKnown RBP11.4□□□□□ -0.58
MECP2-204ENST00000415944 CFAP53Q96M91 514 aa11.4□□□□□ -0.58
MECP2-204ENST00000415944 CPSF1Q10570 1443 aaKnown RBP11.4□□□□□ -0.58
MECP2-204ENST00000415944 ANKRD36BQ8N2N9 1353 aa11.4□□□□□ -0.59
MECP2-204ENST00000415944 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
MECP2-204ENST00000415944 PMFBP1Q8TBY8 1022 aa11.39□□□□□ -0.59
MECP2-204ENST00000415944 SHPRHQ149N8 1683 aa11.39□□□□□ -0.59
MECP2-204ENST00000415944 ACEP12821 1306 aa11.38□□□□□ -0.59
MECP2-204ENST00000415944 USP6P35125 1406 aa11.38□□□□□ -0.59
MECP2-204ENST00000415944 FOXO3O43524 673 aa11.38□□□□□ -0.59
MECP2-204ENST00000415944 AAMPQ13685 434 aa11.38□□□□□ -0.59
MECP2-204ENST00000415944 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
MECP2-204ENST00000415944 TERF2IPQ9NYB0 399 aa11.38□□□□□ -0.59
MECP2-204ENST00000415944 CABP1Q9NZU7 370 aa11.38□□□□□ -0.59
MECP2-204ENST00000415944 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
MECP2-204ENST00000415944 SSH2Q76I76 1423 aa11.37□□□□□ -0.59
MECP2-204ENST00000415944 DDX17Q92841 729 aaKnown RBP11.37□□□□□ -0.59
MECP2-204ENST00000415944 TSHZ2Q9NRE2 1034 aa11.37□□□□□ -0.59
MECP2-204ENST00000415944 COL22A1Q8NFW1 1626 aaPredicted RBP11.37□□□□□ -0.59
MECP2-204ENST00000415944 A0A1W2PP64 1363 aa11.37□□□□□ -0.59
MECP2-204ENST00000415944 SBNO1A3KN83 1393 aa11.37□□□□□ -0.59
MECP2-204ENST00000415944 USP54Q70EL1 1684 aa11.36□□□□□ -0.59
MECP2-204ENST00000415944 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
MECP2-204ENST00000415944 CRYBG1Q9Y4K1 1723 aa11.36□□□□□ -0.59
MECP2-204ENST00000415944 HSPA1LP34931 641 aa11.36□□□□□ -0.59
MECP2-204ENST00000415944 NGDNQ8NEJ9 315 aaKnown RBP11.36□□□□□ -0.59
MECP2-204ENST00000415944 SLC12A5Q9H2X9 1139 aa11.36□□□□□ -0.59
MECP2-204ENST00000415944 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
MECP2-204ENST00000415944 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
MECP2-204ENST00000415944 KRT28Q7Z3Y7 464 aa11.35□□□□□ -0.59
MECP2-204ENST00000415944 MED1Q15648 1581 aaPredicted RBP11.35□□□□□ -0.59
MECP2-204ENST00000415944 PIK3C2AO00443 1686 aa11.35□□□□□ -0.59
MECP2-204ENST00000415944 ABCA3Q99758 1704 aa11.35□□□□□ -0.59
MECP2-204ENST00000415944 MARF1Q9Y4F3 1742 aaKnown RBP11.35□□□□□ -0.59
MECP2-204ENST00000415944 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
MECP2-204ENST00000415944 E9PSI1 815 aa11.34□□□□□ -0.59
MECP2-204ENST00000415944 PSME1Q06323 249 aa11.34□□□□□ -0.59
MECP2-204ENST00000415944 MORC1Q86VD1 984 aa11.34□□□□□ -0.59
MECP2-204ENST00000415944 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
MECP2-204ENST00000415944 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
MECP2-204ENST00000415944 SPATA31A3Q5VYP0 1347 aa11.34□□□□□ -0.59
MECP2-204ENST00000415944 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
MECP2-204ENST00000415944 XPCQ01831 940 aaPredicted RBP11.33□□□□□ -0.6
MECP2-204ENST00000415944 HDGFL2Q7Z4V5 671 aaPredicted RBP11.33□□□□□ -0.6
MECP2-204ENST00000415944 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
MECP2-204ENST00000415944 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
MECP2-204ENST00000415944 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
MECP2-204ENST00000415944 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
MECP2-204ENST00000415944 JCADQ9P266 1359 aa11.32□□□□□ -0.6
MECP2-204ENST00000415944 CT47B1P0C2W7 299 aaPredicted RBP11.32□□□□□ -0.6
MECP2-204ENST00000415944 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
MECP2-204ENST00000415944 LRRC59Q96AG4 307 aaKnown RBP11.32□□□□□ -0.6
MECP2-204ENST00000415944 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
MECP2-204ENST00000415944 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
MECP2-204ENST00000415944 PHRF1Q9P1Y6 1649 aaKnown RBP11.31□□□□□ -0.6
MECP2-204ENST00000415944 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
MECP2-204ENST00000415944 ANKRD26Q9UPS8 1709 aa11.31□□□□□ -0.6
MECP2-204ENST00000415944 TTC21BQ7Z4L5 1316 aa11.31□□□□□ -0.6
MECP2-204ENST00000415944 FANCIQ9NVI1 1328 aa11.31□□□□□ -0.6
MECP2-204ENST00000415944 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
MECP2-204ENST00000415944 TRMT2AQ8IZ69 625 aaKnown RBP11.29□□□□□ -0.6
MECP2-204ENST00000415944 RUNDC1Q96C34 613 aa11.29□□□□□ -0.6
MECP2-204ENST00000415944 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
MECP2-204ENST00000415944 SLIT3O75094 1523 aa11.29□□□□□ -0.6
MECP2-204ENST00000415944 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
MECP2-204ENST00000415944 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
MECP2-204ENST00000415944 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
MECP2-204ENST00000415944 MS4A1P11836 297 aa11.28□□□□□ -0.6
MECP2-204ENST00000415944 USP19O94966 1318 aa11.28□□□□□ -0.6
MECP2-204ENST00000415944 TCERG1O14776 1098 aaKnown RBP11.27□□□□□ -0.61
MECP2-204ENST00000415944 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.61
MECP2-204ENST00000415944 SLFN5Q08AF3 891 aa11.27□□□□□ -0.61
MECP2-204ENST00000415944 SPATA31A6Q5VVP1 1343 aa11.27□□□□□ -0.61
MECP2-204ENST00000415944 LRP6O75581 1613 aa11.27□□□□□ -0.61
MECP2-204ENST00000415944 CNGB1Q14028 1251 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms