RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 DISP3Q9P2K9 1392 aa9.07□□□□□ -0.96
HDAC8-211ENST00000415409 KIF1BO60333 1816 aa9.06□□□□□ -0.96
HDAC8-211ENST00000415409 ECM2O94769 699 aaPredicted RBP9.06□□□□□ -0.96
HDAC8-211ENST00000415409 TMEM132EQ6IEE7 984 aa9.06□□□□□ -0.96
HDAC8-211ENST00000415409 HS3ST6Q96QI5 342 aa9.06□□□□□ -0.96
HDAC8-211ENST00000415409 BCL11BQ9C0K0 894 aaPredicted RBP9.06□□□□□ -0.96
HDAC8-211ENST00000415409 STK24Q9Y6E0 443 aa9.06□□□□□ -0.96
HDAC8-211ENST00000415409 A2ML1A8K2U0 1454 aa9.06□□□□□ -0.96
HDAC8-211ENST00000415409 RIMS2Q9UQ26 1411 aa9.05□□□□□ -0.96
HDAC8-211ENST00000415409 NEXMIFQ5QGS0 1516 aa9.05□□□□□ -0.96
HDAC8-211ENST00000415409 CLTCQ00610 1675 aaKnown RBP9.05□□□□□ -0.96
HDAC8-211ENST00000415409 SETBP1Q9Y6X0 1596 aa9.05□□□□□ -0.96
HDAC8-211ENST00000415409 SBNO2Q9Y2G9 1366 aa9.05□□□□□ -0.96
HDAC8-211ENST00000415409 RIMBP2O15034 1052 aa9.05□□□□□ -0.96
HDAC8-211ENST00000415409 KIAA1210Q9ULL0 1709 aa9.05□□□□□ -0.96
HDAC8-211ENST00000415409 MROH2AA6NES4 1674 aa9.04□□□□□ -0.96
HDAC8-211ENST00000415409 KTN1Q86UP2 1357 aaKnown RBP9.04□□□□□ -0.96
HDAC8-211ENST00000415409 CEBPAP49715 358 aaPredicted RBP9.04□□□□□ -0.96
HDAC8-211ENST00000415409 RALBP1Q15311 655 aa9.04□□□□□ -0.96
HDAC8-211ENST00000415409 NLRP1Q9C000 1473 aa9.03□□□□□ -0.96
HDAC8-211ENST00000415409 TMEM131LA2VDJ0 1609 aa9.03□□□□□ -0.96
HDAC8-211ENST00000415409 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
HDAC8-211ENST00000415409 NLRP6P59044 892 aa9.03□□□□□ -0.96
HDAC8-211ENST00000415409 BCANQ96GW7 911 aa9.03□□□□□ -0.96
HDAC8-211ENST00000415409 PANK3Q9H999 370 aa9.03□□□□□ -0.96
HDAC8-211ENST00000415409 STK26Q9P289 416 aa9.03□□□□□ -0.96
HDAC8-211ENST00000415409 STRCQ7RTU9 1775 aa9.03□□□□□ -0.96
HDAC8-211ENST00000415409 TMEM2Q9UHN6 1383 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 C3P01024 1663 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 STK25O00506 426 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 MS4A4AQ96JQ5 239 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
HDAC8-211ENST00000415409 POGKQ9P215 609 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 EID1Q9Y6B2 187 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 ADGRB1O14514 1584 aa9.02□□□□□ -0.97
HDAC8-211ENST00000415409 THEMISQ8N1K5 641 aaPredicted RBP9.01□□□□□ -0.97
HDAC8-211ENST00000415409 MRS2Q9HD23 443 aa9.01□□□□□ -0.97
HDAC8-211ENST00000415409 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
HDAC8-211ENST00000415409 EVC2Q86UK5 1308 aa9.01□□□□□ -0.97
HDAC8-211ENST00000415409 IFT172Q9UG01 1749 aa9□□□□□ -0.97
HDAC8-211ENST00000415409 PPLO60437 1756 aa9□□□□□ -0.97
HDAC8-211ENST00000415409 PER1O15534 1290 aaPredicted RBP9□□□□□ -0.97
HDAC8-211ENST00000415409 HOXB1P14653 301 aaPredicted RBP9□□□□□ -0.97
HDAC8-211ENST00000415409 CNGB1Q14028 1251 aaPredicted RBP9□□□□□ -0.97
HDAC8-211ENST00000415409 TXNDC2Q86VQ3 553 aa9□□□□□ -0.97
HDAC8-211ENST00000415409 IQGAP1P46940 1657 aa9□□□□□ -0.97
HDAC8-211ENST00000415409 ERBB3P21860 1342 aa9□□□□□ -0.97
HDAC8-211ENST00000415409 LRPPRCP42704 1394 aaKnown RBP8.99□□□□□ -0.97
HDAC8-211ENST00000415409 YTHDC2Q9H6S0 1430 aaKnown RBP8.99□□□□□ -0.97
HDAC8-211ENST00000415409 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
HDAC8-211ENST00000415409 PRAM1Q96QH2 718 aa8.99□□□□□ -0.97
HDAC8-211ENST00000415409 MYBBP1AQ9BQG0 1328 aaKnown RBP8.99□□□□□ -0.97
HDAC8-211ENST00000415409 POTEB3A0JP26 581 aa8.98□□□□□ -0.97
HDAC8-211ENST00000415409 SAFB2Q14151 953 aaKnown RBP eCLIP8.98□□□□□ -0.97
HDAC8-211ENST00000415409 POTEBQ6S5H4 581 aa8.98□□□□□ -0.97
HDAC8-211ENST00000415409 TMEM92Q6UXU6 159 aa8.98□□□□□ -0.97
HDAC8-211ENST00000415409 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
HDAC8-211ENST00000415409 DAXXQ9UER7 740 aaPredicted RBP8.98□□□□□ -0.97
HDAC8-211ENST00000415409 ABCC11Q96J66 1382 aa8.98□□□□□ -0.97
HDAC8-211ENST00000415409 PLEKHG1Q9ULL1 1385 aa8.98□□□□□ -0.97
HDAC8-211ENST00000415409 CC2D1BQ5T0F9 858 aaKnown RBP8.97□□□□□ -0.97
HDAC8-211ENST00000415409 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
HDAC8-211ENST00000415409 SIRT1Q96EB6 747 aa8.97□□□□□ -0.97
HDAC8-211ENST00000415409 ALKQ9UM73 1620 aa8.97□□□□□ -0.97
HDAC8-211ENST00000415409 LTKP29376 864 aa8.96□□□□□ -0.98
HDAC8-211ENST00000415409 HSPA2P54652 639 aa8.96□□□□□ -0.98
HDAC8-211ENST00000415409 SRPK2P78362 688 aaKnown RBP8.96□□□□□ -0.98
HDAC8-211ENST00000415409 FAM9BQ8IZU0 186 aa8.96□□□□□ -0.98
HDAC8-211ENST00000415409 CERKQ8TCT0 537 aa8.96□□□□□ -0.98
HDAC8-211ENST00000415409 POLR1AO95602 1720 aaPredicted RBP8.96□□□□□ -0.98
HDAC8-211ENST00000415409 BRD4O60885 1362 aaPredicted RBP8.96□□□□□ -0.98
HDAC8-211ENST00000415409 PARD3Q8TEW0 1356 aa8.96□□□□□ -0.98
HDAC8-211ENST00000415409 CCDC184Q52MB2 194 aa8.95□□□□□ -0.98
HDAC8-211ENST00000415409 MINK1Q8N4C8 1332 aaPredicted RBP8.95□□□□□ -0.98
HDAC8-211ENST00000415409 METP08581 1390 aa8.95□□□□□ -0.98
HDAC8-211ENST00000415409 CFAP65Q6ZU64 1925 aaKnown RBP8.95□□□□□ -0.98
HDAC8-211ENST00000415409 NPC1L1Q9UHC9 1359 aa8.95□□□□□ -0.98
HDAC8-211ENST00000415409 NINLQ9Y2I6 1382 aa8.95□□□□□ -0.98
HDAC8-211ENST00000415409 ASXL1Q8IXJ9 1541 aa8.95□□□□□ -0.98
HDAC8-211ENST00000415409 MYO3AQ8NEV4 1616 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 RGL2O15211 777 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 HNRNPUQ00839 825 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC8-211ENST00000415409 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
HDAC8-211ENST00000415409 FBXO22Q8NEZ5 403 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 SLC12A5Q9H2X9 1139 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 TBX22Q9Y458 520 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 ATAD2Q6PL18 1390 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 DLC1Q96QB1 1528 aa8.94□□□□□ -0.98
HDAC8-211ENST00000415409 WAPLQ7Z5K2 1190 aa8.93□□□□□ -0.98
HDAC8-211ENST00000415409 ANKLE2Q86XL3 938 aa8.93□□□□□ -0.98
HDAC8-211ENST00000415409 CDK19Q9BWU1 502 aa8.93□□□□□ -0.98
HDAC8-211ENST00000415409 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
HDAC8-211ENST00000415409 ZSWIM6Q9HCJ5 1215 aa8.93□□□□□ -0.98
HDAC8-211ENST00000415409 IQSEC2Q5JU85 1478 aa8.93□□□□□ -0.98
HDAC8-211ENST00000415409 ARHGAP23Q9P227 1491 aa8.93□□□□□ -0.98
HDAC8-211ENST00000415409 KDM5AP29375 1690 aaKnown RBP8.93□□□□□ -0.98
HDAC8-211ENST00000415409 ZNF142P52746 1687 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms