RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 NME9Q86XW9 330 aa18.03■□□□□ 0.48
SNHG17-202ENST00000414142 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
SNHG17-202ENST00000414142 RRP1P56182 461 aaKnown RBP18.02■□□□□ 0.48
SNHG17-202ENST00000414142 U2SURPO15042 1029 aaKnown RBP18.02■□□□□ 0.47
SNHG17-202ENST00000414142 DUSP27Q5VZP5 1158 aa18.02■□□□□ 0.47
SNHG17-202ENST00000414142 PIK3R4Q99570 1358 aa18.02■□□□□ 0.47
SNHG17-202ENST00000414142 KCNA6P17658 529 aa18.01■□□□□ 0.47
SNHG17-202ENST00000414142 SLFN5Q08AF3 891 aa18.01■□□□□ 0.47
SNHG17-202ENST00000414142 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
SNHG17-202ENST00000414142 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
SNHG17-202ENST00000414142 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
SNHG17-202ENST00000414142 ACEP12821 1306 aa18■□□□□ 0.47
SNHG17-202ENST00000414142 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
SNHG17-202ENST00000414142 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
SNHG17-202ENST00000414142 COG3Q96JB2 828 aa18■□□□□ 0.47
SNHG17-202ENST00000414142 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
SNHG17-202ENST00000414142 TOPAZ1Q8N9V7 1692 aa17.99■□□□□ 0.47
SNHG17-202ENST00000414142 DIAPH1O60610 1272 aaKnown RBP17.99■□□□□ 0.47
SNHG17-202ENST00000414142 FBLN1P23142 703 aa17.99■□□□□ 0.47
SNHG17-202ENST00000414142 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
SNHG17-202ENST00000414142 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
SNHG17-202ENST00000414142 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
SNHG17-202ENST00000414142 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
SNHG17-202ENST00000414142 POLKQ9UBT6 870 aa17.98■□□□□ 0.47
SNHG17-202ENST00000414142 E9PSI1 815 aa17.98■□□□□ 0.47
SNHG17-202ENST00000414142 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
SNHG17-202ENST00000414142 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
SNHG17-202ENST00000414142 TRMT2AQ8IZ69 625 aaKnown RBP17.96■□□□□ 0.47
SNHG17-202ENST00000414142 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
SNHG17-202ENST00000414142 IQSEC2Q5JU85 1478 aa17.96■□□□□ 0.47
SNHG17-202ENST00000414142 TTC21BQ7Z4L5 1316 aa17.96■□□□□ 0.46
SNHG17-202ENST00000414142 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
SNHG17-202ENST00000414142 CHD2O14647 1828 aaKnown RBP17.95■□□□□ 0.46
SNHG17-202ENST00000414142 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
SNHG17-202ENST00000414142 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
SNHG17-202ENST00000414142 RGPD8O14715 1765 aaPredicted RBP17.94■□□□□ 0.46
SNHG17-202ENST00000414142 EMILIN1Q9Y6C2 1016 aa17.94■□□□□ 0.46
SNHG17-202ENST00000414142 NGDNQ8NEJ9 315 aaKnown RBP17.93■□□□□ 0.46
SNHG17-202ENST00000414142 USP6P35125 1406 aa17.93■□□□□ 0.46
SNHG17-202ENST00000414142 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
SNHG17-202ENST00000414142 MAPK8IP3Q9UPT6 1336 aa17.93■□□□□ 0.46
SNHG17-202ENST00000414142 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
SNHG17-202ENST00000414142 PLIN1O60240 522 aa17.92■□□□□ 0.46
SNHG17-202ENST00000414142 CCDC27Q2M243 656 aa17.92■□□□□ 0.46
SNHG17-202ENST00000414142 PLEKHF1Q96S99 279 aa17.92■□□□□ 0.46
SNHG17-202ENST00000414142 NPHP4O75161 1426 aaPredicted RBP17.91■□□□□ 0.46
SNHG17-202ENST00000414142 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
SNHG17-202ENST00000414142 WDR63Q8IWG1 891 aa17.91■□□□□ 0.46
SNHG17-202ENST00000414142 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
SNHG17-202ENST00000414142 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
SNHG17-202ENST00000414142 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
SNHG17-202ENST00000414142 CCDC136Q96JN2 1154 aa17.9■□□□□ 0.46
SNHG17-202ENST00000414142 EXOC6Q8TAG9 804 aa17.9■□□□□ 0.46
SNHG17-202ENST00000414142 ANKARQ7Z5J8 1434 aa17.89■□□□□ 0.45
SNHG17-202ENST00000414142 FCHSD2O94868 740 aa17.89■□□□□ 0.45
SNHG17-202ENST00000414142 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
SNHG17-202ENST00000414142 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
SNHG17-202ENST00000414142 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
SNHG17-202ENST00000414142 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
SNHG17-202ENST00000414142 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
SNHG17-202ENST00000414142 RBM33Q96EV2 1170 aaKnown RBP17.87■□□□□ 0.45
SNHG17-202ENST00000414142 NEFMP07197 916 aa17.87■□□□□ 0.45
SNHG17-202ENST00000414142 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.87■□□□□ 0.45
SNHG17-202ENST00000414142 IL13P35225 146 aa17.86■□□□□ 0.45
SNHG17-202ENST00000414142 SSH2Q76I76 1423 aa17.86■□□□□ 0.45
SNHG17-202ENST00000414142 OVOS2A0A0J9YW53 1432 aa17.86■□□□□ 0.45
SNHG17-202ENST00000414142 OVOS2Q6IE36 1432 aa17.86■□□□□ 0.45
SNHG17-202ENST00000414142 NALCNQ8IZF0 1738 aa17.85■□□□□ 0.45
SNHG17-202ENST00000414142 HMOX1P09601 288 aa17.84■□□□□ 0.45
SNHG17-202ENST00000414142 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
SNHG17-202ENST00000414142 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
SNHG17-202ENST00000414142 RIPK4P57078 832 aa17.84■□□□□ 0.45
SNHG17-202ENST00000414142 C14orf37Q86TY3 774 aa17.84■□□□□ 0.45
SNHG17-202ENST00000414142 MYH16Q9H6N6 1097 aa17.84■□□□□ 0.45
SNHG17-202ENST00000414142 SOX12O15370 315 aa17.83■□□□□ 0.45
SNHG17-202ENST00000414142 LRRC7Q96NW7 1537 aa17.83■□□□□ 0.44
SNHG17-202ENST00000414142 CRBNQ96SW2 442 aa17.83■□□□□ 0.44
SNHG17-202ENST00000414142 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
SNHG17-202ENST00000414142 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
SNHG17-202ENST00000414142 BCAR3O75815 825 aa17.81■□□□□ 0.44
SNHG17-202ENST00000414142 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
SNHG17-202ENST00000414142 ADGRL3Q9HAR2 1447 aa17.81■□□□□ 0.44
SNHG17-202ENST00000414142 PHF8Q9UPP1 1060 aa17.8■□□□□ 0.44
SNHG17-202ENST00000414142 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
SNHG17-202ENST00000414142 NLRP6P59044 892 aa17.79■□□□□ 0.44
SNHG17-202ENST00000414142 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
SNHG17-202ENST00000414142 PHACTR3Q96KR7 559 aa17.78■□□□□ 0.44
SNHG17-202ENST00000414142 EIF4A2Q14240 407 aaKnown RBP17.77■□□□□ 0.44
SNHG17-202ENST00000414142 NFE2L2Q16236 605 aa17.77■□□□□ 0.44
SNHG17-202ENST00000414142 ESCO1Q5FWF5 840 aa17.77■□□□□ 0.44
SNHG17-202ENST00000414142 PIK3C2AO00443 1686 aa17.77■□□□□ 0.44
SNHG17-202ENST00000414142 NUTM2GQ5VZR2 741 aa17.77■□□□□ 0.43
SNHG17-202ENST00000414142 ABTB2Q8N961 1025 aa17.77■□□□□ 0.43
SNHG17-202ENST00000414142 IL16Q14005 1332 aa17.77■□□□□ 0.43
SNHG17-202ENST00000414142 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
SNHG17-202ENST00000414142 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
SNHG17-202ENST00000414142 MAP3K19Q56UN5 1328 aa17.75■□□□□ 0.43
SNHG17-202ENST00000414142 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
SNHG17-202ENST00000414142 PEAK1Q9H792 1746 aa17.75■□□□□ 0.43
SNHG17-202ENST00000414142 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms