RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 USP47Q96K76 1375 aa14.22□□□□□ -0.13
TMEM248-202ENST00000413593 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
TMEM248-202ENST00000413593 CABLES1Q8TDN4 633 aa14.22□□□□□ -0.13
TMEM248-202ENST00000413593 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
TMEM248-202ENST00000413593 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
TMEM248-202ENST00000413593 HAP1P54257 671 aaPredicted RBP14.19□□□□□ -0.14
TMEM248-202ENST00000413593 FNBP4Q8N3X1 1017 aaPredicted RBP14.19□□□□□ -0.14
TMEM248-202ENST00000413593 ALS2Q96Q42 1657 aa14.19□□□□□ -0.14
TMEM248-202ENST00000413593 USP6P35125 1406 aa14.18□□□□□ -0.14
TMEM248-202ENST00000413593 PUS7Q96PZ0 661 aaKnown RBP14.18□□□□□ -0.14
TMEM248-202ENST00000413593 BRD4O60885 1362 aaPredicted RBP14.18□□□□□ -0.14
TMEM248-202ENST00000413593 SLC24A1O60721 1099 aa14.17□□□□□ -0.14
TMEM248-202ENST00000413593 USP21Q9UK80 565 aa14.17□□□□□ -0.14
TMEM248-202ENST00000413593 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
TMEM248-202ENST00000413593 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
TMEM248-202ENST00000413593 NUTM2GQ5VZR2 741 aa14.16□□□□□ -0.14
TMEM248-202ENST00000413593 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
TMEM248-202ENST00000413593 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
TMEM248-202ENST00000413593 CPSF1Q10570 1443 aaKnown RBP14.15□□□□□ -0.14
TMEM248-202ENST00000413593 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.14
TMEM248-202ENST00000413593 SOCS7O14512 581 aa14.15□□□□□ -0.14
TMEM248-202ENST00000413593 ABTB2Q8N961 1025 aa14.15□□□□□ -0.14
TMEM248-202ENST00000413593 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.14
TMEM248-202ENST00000413593 SLIT2O94813 1529 aa14.15□□□□□ -0.14
TMEM248-202ENST00000413593 TMF1P82094 1093 aa14.14□□□□□ -0.15
TMEM248-202ENST00000413593 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
TMEM248-202ENST00000413593 SLC12A5Q9H2X9 1139 aa14.14□□□□□ -0.15
TMEM248-202ENST00000413593 ABCA3Q99758 1704 aa14.14□□□□□ -0.15
TMEM248-202ENST00000413593 USP19O94966 1318 aa14.14□□□□□ -0.15
TMEM248-202ENST00000413593 CD163L1Q9NR16 1453 aa14.13□□□□□ -0.15
TMEM248-202ENST00000413593 RXRBP28702 533 aa14.13□□□□□ -0.15
TMEM248-202ENST00000413593 ATRNO75882 1429 aa14.13□□□□□ -0.15
TMEM248-202ENST00000413593 TTC21BQ7Z4L5 1316 aa14.13□□□□□ -0.15
TMEM248-202ENST00000413593 KTN1Q86UP2 1357 aaKnown RBP14.12□□□□□ -0.15
TMEM248-202ENST00000413593 FAM83GA6ND36 823 aa14.12□□□□□ -0.15
TMEM248-202ENST00000413593 RBM6P78332 1123 aaKnown RBP14.12□□□□□ -0.15
TMEM248-202ENST00000413593 NLRP13Q86W25 1043 aa14.12□□□□□ -0.15
TMEM248-202ENST00000413593 UNC5CLQ8IV45 518 aa14.12□□□□□ -0.15
TMEM248-202ENST00000413593 TRPC5Q9UL62 973 aaPredicted RBP14.12□□□□□ -0.15
TMEM248-202ENST00000413593 NINLQ9Y2I6 1382 aa14.11□□□□□ -0.15
TMEM248-202ENST00000413593 PRDM11Q9NQV5 511 aa14.11□□□□□ -0.15
TMEM248-202ENST00000413593 MARF1Q9Y4F3 1742 aaKnown RBP14.11□□□□□ -0.15
TMEM248-202ENST00000413593 CRYBG1Q9Y4K1 1723 aa14.11□□□□□ -0.15
TMEM248-202ENST00000413593 TTC21AQ8NDW8 1320 aa14.11□□□□□ -0.15
TMEM248-202ENST00000413593 NLRP6P59044 892 aa14.1□□□□□ -0.15
TMEM248-202ENST00000413593 EIF4G2P78344 907 aaKnown RBP eCLIP14.1□□□□□ -0.15
TMEM248-202ENST00000413593 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
TMEM248-202ENST00000413593 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
TMEM248-202ENST00000413593 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
TMEM248-202ENST00000413593 CDK12Q9NYV4 1490 aaPredicted RBP14.1□□□□□ -0.15
TMEM248-202ENST00000413593 A0A1W2PP64 1363 aa14.09□□□□□ -0.15
TMEM248-202ENST00000413593 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
TMEM248-202ENST00000413593 GCP02774 474 aa14.08□□□□□ -0.16
TMEM248-202ENST00000413593 HSPA5P11021 654 aaKnown RBP14.08□□□□□ -0.16
TMEM248-202ENST00000413593 ZC3H6P61129 1189 aaKnown RBP14.08□□□□□ -0.16
TMEM248-202ENST00000413593 AKAP12Q02952 1782 aa14.08□□□□□ -0.16
TMEM248-202ENST00000413593 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
TMEM248-202ENST00000413593 CPDO75976 1380 aa14.08□□□□□ -0.16
TMEM248-202ENST00000413593 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.16
TMEM248-202ENST00000413593 EDC4Q6P2E9 1401 aaKnown RBP14.07□□□□□ -0.16
TMEM248-202ENST00000413593 VPS72Q15906 364 aa14.07□□□□□ -0.16
TMEM248-202ENST00000413593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM248-202ENST00000413593 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
TMEM248-202ENST00000413593 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
TMEM248-202ENST00000413593 PIK3C2AO00443 1686 aa14.07□□□□□ -0.16
TMEM248-202ENST00000413593 RGS12O14924 1447 aa14.07□□□□□ -0.16
TMEM248-202ENST00000413593 SLIT3O75094 1523 aa14.06□□□□□ -0.16
TMEM248-202ENST00000413593 CHRNA2Q15822 529 aa14.06□□□□□ -0.16
TMEM248-202ENST00000413593 MON2Q7Z3U7 1717 aa14.06□□□□□ -0.16
TMEM248-202ENST00000413593 USP31Q70CQ4 1352 aa14.06□□□□□ -0.16
TMEM248-202ENST00000413593 ANKRD36BQ8N2N9 1353 aa14.06□□□□□ -0.16
TMEM248-202ENST00000413593 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
TMEM248-202ENST00000413593 PLCH1Q4KWH8 1693 aa14.05□□□□□ -0.16
TMEM248-202ENST00000413593 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.05□□□□□ -0.16
TMEM248-202ENST00000413593 NME9Q86XW9 330 aa14.05□□□□□ -0.16
TMEM248-202ENST00000413593 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
TMEM248-202ENST00000413593 ZRANB1Q9UGI0 708 aa14.04□□□□□ -0.16
TMEM248-202ENST00000413593 KCNH5Q8NCM2 988 aa14.03□□□□□ -0.16
TMEM248-202ENST00000413593 GLI3P10071 1580 aa14.02□□□□□ -0.16
TMEM248-202ENST00000413593 CCDC9Q9Y3X0 531 aaKnown RBP14.02□□□□□ -0.17
TMEM248-202ENST00000413593 NRAPQ86VF7 1730 aa14.01□□□□□ -0.17
TMEM248-202ENST00000413593 AATKQ6ZMQ8 1374 aa14.01□□□□□ -0.17
TMEM248-202ENST00000413593 SOX12O15370 315 aa14.01□□□□□ -0.17
TMEM248-202ENST00000413593 OVOS2A0A0J9YW53 1432 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 OVOS2Q6IE36 1432 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 SPATA31A5Q5VU36 1347 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 SPATA31A7Q8IWB4 1347 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 ZBTB7CA1YPR0 619 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 ARHGEF25Q86VW2 580 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 STRN4Q9NRL3 753 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 CAMTA1Q9Y6Y1 1673 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 NFAT5O94916 1531 aa14□□□□□ -0.17
TMEM248-202ENST00000413593 LMO7Q8WWI1 1683 aa13.99□□□□□ -0.17
TMEM248-202ENST00000413593 ONECUT3O60422 494 aaPredicted RBP13.99□□□□□ -0.17
TMEM248-202ENST00000413593 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
TMEM248-202ENST00000413593 EVA1CP58658 441 aa13.98□□□□□ -0.17
TMEM248-202ENST00000413593 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
TMEM248-202ENST00000413593 CARD14Q9BXL6 1004 aa13.98□□□□□ -0.17
TMEM248-202ENST00000413593 MYOM1P52179 1685 aa13.98□□□□□ -0.17
TMEM248-202ENST00000413593 SPATA31A1Q5TZJ5 1347 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms