RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SSH1Q8WYL5 1049 aa19.09■□□□□ 0.65
TTC39A-208ENST00000413473 BECN1Q14457 450 aa19.08■□□□□ 0.65
TTC39A-208ENST00000413473 MYO5BQ9ULV0 1848 aa19.08■□□□□ 0.64
TTC39A-208ENST00000413473 TRIM27P14373 513 aa19.08■□□□□ 0.64
TTC39A-208ENST00000413473 PTPRMP28827 1452 aa19.07■□□□□ 0.64
TTC39A-208ENST00000413473 NLRP1Q9C000 1473 aa19.07■□□□□ 0.64
TTC39A-208ENST00000413473 RIPK4P57078 832 aa19.07■□□□□ 0.64
TTC39A-208ENST00000413473 UPF2Q9HAU5 1272 aaKnown RBP19.07■□□□□ 0.64
TTC39A-208ENST00000413473 COL3A1P02461 1466 aaPredicted RBP19.07■□□□□ 0.64
TTC39A-208ENST00000413473 FBXO31Q5XUX0 539 aaPredicted RBP19.06■□□□□ 0.64
TTC39A-208ENST00000413473 YTHDC2Q9H6S0 1430 aaKnown RBP19.06■□□□□ 0.64
TTC39A-208ENST00000413473 DIAPH1O60610 1272 aaKnown RBP19.06■□□□□ 0.64
TTC39A-208ENST00000413473 ZMYM3Q14202 1370 aa19.06■□□□□ 0.64
TTC39A-208ENST00000413473 CD163L1Q9NR16 1453 aa19.05■□□□□ 0.64
TTC39A-208ENST00000413473 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
TTC39A-208ENST00000413473 HDGFL2Q7Z4V5 671 aaPredicted RBP19.05■□□□□ 0.64
TTC39A-208ENST00000413473 CABP1Q9NZU7 370 aa19.05■□□□□ 0.64
TTC39A-208ENST00000413473 ATF7IPQ6VMQ6 1270 aa19.04■□□□□ 0.64
TTC39A-208ENST00000413473 ITPRIPQ8IWB1 547 aa19.04■□□□□ 0.64
TTC39A-208ENST00000413473 TBC1D32Q96NH3 1257 aa19.04■□□□□ 0.64
TTC39A-208ENST00000413473 NOB1Q9ULX3 412 aaKnown RBP19.04■□□□□ 0.64
TTC39A-208ENST00000413473 IL16Q14005 1332 aa19.04■□□□□ 0.64
TTC39A-208ENST00000413473 TMEM131LA2VDJ0 1609 aa19.03■□□□□ 0.64
TTC39A-208ENST00000413473 SLKQ9H2G2 1235 aaPredicted RBP19.03■□□□□ 0.64
TTC39A-208ENST00000413473 RICTORQ6R327 1708 aa19.03■□□□□ 0.64
TTC39A-208ENST00000413473 DDX19BQ9UMR2 479 aa19.03■□□□□ 0.64
TTC39A-208ENST00000413473 MED14O60244 1454 aa19.02■□□□□ 0.63
TTC39A-208ENST00000413473 PREX1Q8TCU6 1659 aa19.01■□□□□ 0.63
TTC39A-208ENST00000413473 HDAC1Q13547 482 aaPredicted RBP19.01■□□□□ 0.63
TTC39A-208ENST00000413473 PNNQ9H307 717 aaKnown RBP19.01■□□□□ 0.63
TTC39A-208ENST00000413473 RTN4Q9NQC3 1192 aaKnown RBP19.01■□□□□ 0.63
TTC39A-208ENST00000413473 STAG3Q9UJ98 1225 aa19.01■□□□□ 0.63
TTC39A-208ENST00000413473 PNPLA6Q8IY17 1366 aa19■□□□□ 0.63
TTC39A-208ENST00000413473 FBLN1P23142 703 aa19■□□□□ 0.63
TTC39A-208ENST00000413473 TMEM57Q8N5G2 664 aa19■□□□□ 0.63
TTC39A-208ENST00000413473 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
TTC39A-208ENST00000413473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.99■□□□□ 0.63
TTC39A-208ENST00000413473 FCHSD2O94868 740 aa18.98■□□□□ 0.63
TTC39A-208ENST00000413473 TBC1D2Q9BYX2 928 aa18.98■□□□□ 0.63
TTC39A-208ENST00000413473 ANKRD26Q9UPS8 1709 aa18.98■□□□□ 0.63
TTC39A-208ENST00000413473 CLTCQ00610 1675 aaKnown RBP18.97■□□□□ 0.63
TTC39A-208ENST00000413473 ALKQ9UM73 1620 aa18.97■□□□□ 0.63
TTC39A-208ENST00000413473 ARHGEF40Q8TER5 1519 aa18.97■□□□□ 0.63
TTC39A-208ENST00000413473 IPO8O15397 1037 aaKnown RBP18.97■□□□□ 0.63
TTC39A-208ENST00000413473 ANTXR1Q9H6X2 564 aa18.97■□□□□ 0.63
TTC39A-208ENST00000413473 ZBTB40Q9NUA8 1239 aa18.97■□□□□ 0.63
TTC39A-208ENST00000413473 WAPLQ7Z5K2 1190 aa18.96■□□□□ 0.63
TTC39A-208ENST00000413473 PRKAR2BP31323 418 aa18.96■□□□□ 0.63
TTC39A-208ENST00000413473 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
TTC39A-208ENST00000413473 KIF16BQ96L93 1317 aa18.95■□□□□ 0.62
TTC39A-208ENST00000413473 SMC5Q8IY18 1101 aa18.95■□□□□ 0.62
TTC39A-208ENST00000413473 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
TTC39A-208ENST00000413473 MFAP1P55081 439 aaKnown RBP18.94■□□□□ 0.62
TTC39A-208ENST00000413473 ALDH1L2Q3SY69 923 aa18.94■□□□□ 0.62
TTC39A-208ENST00000413473 C22orf23Q9BZE7 217 aa18.93■□□□□ 0.62
TTC39A-208ENST00000413473 HMOX1P09601 288 aa18.92■□□□□ 0.62
TTC39A-208ENST00000413473 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
TTC39A-208ENST00000413473 SPRYD3Q8NCJ5 442 aa18.91■□□□□ 0.62
TTC39A-208ENST00000413473 LRRC7Q96NW7 1537 aa18.91■□□□□ 0.62
TTC39A-208ENST00000413473 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
TTC39A-208ENST00000413473 KIF20BQ96Q89 1820 aa18.9■□□□□ 0.62
TTC39A-208ENST00000413473 FAM135BQ49AJ0 1406 aa18.89■□□□□ 0.62
TTC39A-208ENST00000413473 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
TTC39A-208ENST00000413473 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
TTC39A-208ENST00000413473 NUCB1Q02818 461 aa18.88■□□□□ 0.61
TTC39A-208ENST00000413473 LNPKQ9C0E8 428 aa18.88■□□□□ 0.61
TTC39A-208ENST00000413473 VAMP4O75379 141 aa18.87■□□□□ 0.61
TTC39A-208ENST00000413473 ZNF428Q96B54 188 aa18.87■□□□□ 0.61
TTC39A-208ENST00000413473 CYB5RLQ6IPT4 315 aa18.87■□□□□ 0.61
TTC39A-208ENST00000413473 MAP2P11137 1827 aaKnown RBP18.87■□□□□ 0.61
TTC39A-208ENST00000413473 CDC42BPGQ6DT37 1551 aa18.87■□□□□ 0.61
TTC39A-208ENST00000413473 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
TTC39A-208ENST00000413473 TSPYL6Q8N831 410 aa18.86■□□□□ 0.61
TTC39A-208ENST00000413473 ELL2O00472 640 aaPredicted RBP18.86■□□□□ 0.61
TTC39A-208ENST00000413473 NME9Q86XW9 330 aa18.86■□□□□ 0.61
TTC39A-208ENST00000413473 ATP7BP35670 1465 aa18.86■□□□□ 0.61
TTC39A-208ENST00000413473 IL13P35225 146 aa18.85■□□□□ 0.61
TTC39A-208ENST00000413473 CHD1LQ86WJ1 897 aa18.85■□□□□ 0.61
TTC39A-208ENST00000413473 ZRANB1Q9UGI0 708 aa18.85■□□□□ 0.61
TTC39A-208ENST00000413473 ZBTB7BO15156 539 aaPredicted RBP18.85■□□□□ 0.61
TTC39A-208ENST00000413473 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
TTC39A-208ENST00000413473 MRPL50Q8N5N7 158 aaKnown RBP18.85■□□□□ 0.61
TTC39A-208ENST00000413473 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
TTC39A-208ENST00000413473 PPIP5K1Q6PFW1 1433 aa18.84■□□□□ 0.61
TTC39A-208ENST00000413473 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
TTC39A-208ENST00000413473 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
TTC39A-208ENST00000413473 WASLO00401 505 aaPredicted RBP18.83■□□□□ 0.61
TTC39A-208ENST00000413473 GNAI1P63096 354 aa18.83■□□□□ 0.61
TTC39A-208ENST00000413473 DLC1Q96QB1 1528 aa18.83■□□□□ 0.61
TTC39A-208ENST00000413473 MLECQ14165 292 aa18.83■□□□□ 0.6
TTC39A-208ENST00000413473 ARHGAP45Q92619 1136 aa18.82■□□□□ 0.6
TTC39A-208ENST00000413473 C1orf115Q9H7X2 142 aa18.82■□□□□ 0.6
TTC39A-208ENST00000413473 MBIPQ9NS73 344 aa18.82■□□□□ 0.6
TTC39A-208ENST00000413473 IFT57Q9NWB7 429 aa18.82■□□□□ 0.6
TTC39A-208ENST00000413473 PPP6R1Q9UPN7 881 aa18.82■□□□□ 0.6
TTC39A-208ENST00000413473 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
TTC39A-208ENST00000413473 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
TTC39A-208ENST00000413473 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
TTC39A-208ENST00000413473 TXNDC2Q86VQ3 553 aa18.81■□□□□ 0.6
TTC39A-208ENST00000413473 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms