RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 SPATA31A3Q5VYP0 1347 aa11.72□□□□□ -0.53
CPSF7-203ENST00000413184 ABHD8Q96I13 439 aa11.72□□□□□ -0.53
CPSF7-203ENST00000413184 RGS19P49795 217 aa11.71□□□□□ -0.53
CPSF7-203ENST00000413184 SLC15A2Q16348 729 aa11.71□□□□□ -0.53
CPSF7-203ENST00000413184 PLSCR1O15162 318 aa11.7□□□□□ -0.54
CPSF7-203ENST00000413184 CASKIN1Q8WXD9 1431 aa11.69□□□□□ -0.54
CPSF7-203ENST00000413184 CCDC85CA6NKD9 419 aa11.68□□□□□ -0.54
CPSF7-203ENST00000413184 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
CPSF7-203ENST00000413184 KANK1Q14678 1352 aa11.67□□□□□ -0.54
CPSF7-203ENST00000413184 POLD1P28340 1107 aa11.67□□□□□ -0.54
CPSF7-203ENST00000413184 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
CPSF7-203ENST00000413184 ARHGEF28Q8N1W1 1705 aaKnown RBP11.66□□□□□ -0.54
CPSF7-203ENST00000413184 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
CPSF7-203ENST00000413184 DHX57Q6P158 1386 aaKnown RBP11.66□□□□□ -0.54
CPSF7-203ENST00000413184 C16orf71Q8IYS4 520 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-203ENST00000413184 ARHGEF5Q12774 1597 aa11.64□□□□□ -0.55
CPSF7-203ENST00000413184 FSTL1Q12841 308 aa11.64□□□□□ -0.55
CPSF7-203ENST00000413184 METP08581 1390 aa11.64□□□□□ -0.55
CPSF7-203ENST00000413184 SPATA31A1Q5TZJ5 1347 aa11.63□□□□□ -0.55
CPSF7-203ENST00000413184 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
CPSF7-203ENST00000413184 LMOD2Q6P5Q4 547 aa11.63□□□□□ -0.55
CPSF7-203ENST00000413184 PROM2Q8N271 834 aa11.63□□□□□ -0.55
CPSF7-203ENST00000413184 TULP4Q9NRJ4 1543 aa11.63□□□□□ -0.55
CPSF7-203ENST00000413184 COL14A1Q05707 1796 aaKnown RBP11.63□□□□□ -0.55
CPSF7-203ENST00000413184 TNRC18O15417 2968 aaPredicted RBP11.63□□□□□ -0.55
CPSF7-203ENST00000413184 DUOX2Q9NRD8 1548 aa11.62□□□□□ -0.55
CPSF7-203ENST00000413184 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
CPSF7-203ENST00000413184 FOXN1O15353 648 aa11.61□□□□□ -0.55
CPSF7-203ENST00000413184 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
CPSF7-203ENST00000413184 NRXN3Q9Y4C0 1643 aa11.6□□□□□ -0.55
CPSF7-203ENST00000413184 C11orf95C9JLR9 678 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-203ENST00000413184 KRT28Q7Z3Y7 464 aa11.6□□□□□ -0.55
CPSF7-203ENST00000413184 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
CPSF7-203ENST00000413184 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
CPSF7-203ENST00000413184 LMTK2Q8IWU2 1503 aa11.6□□□□□ -0.55
CPSF7-203ENST00000413184 PMFBP1Q8TBY8 1022 aa11.59□□□□□ -0.55
CPSF7-203ENST00000413184 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
CPSF7-203ENST00000413184 DLL1O00548 723 aa11.58□□□□□ -0.56
CPSF7-203ENST00000413184 TXNRD1Q16881 649 aa11.58□□□□□ -0.56
CPSF7-203ENST00000413184 TOPAZ1Q8N9V7 1692 aa11.58□□□□□ -0.56
CPSF7-203ENST00000413184 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
CPSF7-203ENST00000413184 TECPR2O15040 1411 aa11.57□□□□□ -0.56
CPSF7-203ENST00000413184 CTCFP49711 727 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-203ENST00000413184 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
CPSF7-203ENST00000413184 PSME1Q06323 249 aa11.55□□□□□ -0.56
CPSF7-203ENST00000413184 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
CPSF7-203ENST00000413184 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
CPSF7-203ENST00000413184 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
CPSF7-203ENST00000413184 ARHGEF10O15013 1369 aa11.54□□□□□ -0.56
CPSF7-203ENST00000413184 OVOS2A0A0G2JMS6 1433 aa11.54□□□□□ -0.56
CPSF7-203ENST00000413184 OVOS2A0A0J9YW53 1432 aa11.54□□□□□ -0.56
CPSF7-203ENST00000413184 OVOS2Q6IE36 1432 aa11.54□□□□□ -0.56
CPSF7-203ENST00000413184 BARGINQ6ZT62 677 aa11.54□□□□□ -0.56
CPSF7-203ENST00000413184 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
CPSF7-203ENST00000413184 UBTFP17480 764 aaKnown RBP11.53□□□□□ -0.56
CPSF7-203ENST00000413184 PRPF38BQ5VTL8 546 aaKnown RBP11.53□□□□□ -0.56
CPSF7-203ENST00000413184 PTF1AQ7RTS3 328 aa11.53□□□□□ -0.56
CPSF7-203ENST00000413184 SLC16A10Q8TF71 515 aa11.53□□□□□ -0.56
CPSF7-203ENST00000413184 CDC42BPGQ6DT37 1551 aa11.53□□□□□ -0.56
CPSF7-203ENST00000413184 ROBO2Q9HCK4 1378 aa11.53□□□□□ -0.56
CPSF7-203ENST00000413184 KIF1AQ12756 1690 aa11.52□□□□□ -0.56
CPSF7-203ENST00000413184 LBX1P52954 281 aa11.51□□□□□ -0.57
CPSF7-203ENST00000413184 COL24A1Q17RW2 1714 aa11.5□□□□□ -0.57
CPSF7-203ENST00000413184 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
CPSF7-203ENST00000413184 PRDM11Q9NQV5 511 aa11.5□□□□□ -0.57
CPSF7-203ENST00000413184 KIF15Q9NS87 1388 aa11.49□□□□□ -0.57
CPSF7-203ENST00000413184 PEAK1Q9H792 1746 aa11.49□□□□□ -0.57
CPSF7-203ENST00000413184 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
CPSF7-203ENST00000413184 HFM1A2PYH4 1435 aa11.48□□□□□ -0.57
CPSF7-203ENST00000413184 TCP11L2Q8N4U5 519 aa11.46□□□□□ -0.57
CPSF7-203ENST00000413184 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
CPSF7-203ENST00000413184 CEP162Q5TB80 1403 aa11.45□□□□□ -0.58
CPSF7-203ENST00000413184 PITPNM2Q9BZ72 1349 aa11.45□□□□□ -0.58
CPSF7-203ENST00000413184 EVA1CP58658 441 aa11.45□□□□□ -0.58
CPSF7-203ENST00000413184 ZNF827Q17R98 1081 aa11.45□□□□□ -0.58
CPSF7-203ENST00000413184 MKRN1Q9UHC7 482 aaKnown RBP11.45□□□□□ -0.58
CPSF7-203ENST00000413184 PARP4Q9UKK3 1724 aaKnown RBP11.45□□□□□ -0.58
CPSF7-203ENST00000413184 EEA1Q15075 1411 aa11.43□□□□□ -0.58
CPSF7-203ENST00000413184 PAPPAQ13219 1627 aa11.43□□□□□ -0.58
CPSF7-203ENST00000413184 IQGAP3Q86VI3 1631 aa11.43□□□□□ -0.58
CPSF7-203ENST00000413184 ATP7BP35670 1465 aa11.43□□□□□ -0.58
CPSF7-203ENST00000413184 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
CPSF7-203ENST00000413184 CD2APQ9Y5K6 639 aa11.42□□□□□ -0.58
CPSF7-203ENST00000413184 NAIPQ13075 1403 aa11.42□□□□□ -0.58
CPSF7-203ENST00000413184 CHRNA2Q15822 529 aa11.41□□□□□ -0.58
CPSF7-203ENST00000413184 CUL9Q8IWT3 2517 aa11.4□□□□□ -0.58
CPSF7-203ENST00000413184 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
CPSF7-203ENST00000413184 RRAGCQ9HB90 399 aa11.4□□□□□ -0.58
CPSF7-203ENST00000413184 PHF8Q9UPP1 1060 aa11.4□□□□□ -0.58
CPSF7-203ENST00000413184 THRAP3Q9Y2W1 955 aaKnown RBP11.4□□□□□ -0.58
CPSF7-203ENST00000413184 SSH2Q76I76 1423 aa11.4□□□□□ -0.58
CPSF7-203ENST00000413184 HSPA8P11142 646 aaKnown RBP11.39□□□□□ -0.59
CPSF7-203ENST00000413184 QSER1Q2KHR3 1735 aa11.39□□□□□ -0.59
CPSF7-203ENST00000413184 C10orf71Q711Q0 1435 aa11.39□□□□□ -0.59
CPSF7-203ENST00000413184 MPNDQ8N594 471 aa11.39□□□□□ -0.59
CPSF7-203ENST00000413184 PNPLA7Q6ZV29 1317 aa11.38□□□□□ -0.59
CPSF7-203ENST00000413184 IGSF1Q8N6C5 1336 aa11.38□□□□□ -0.59
CPSF7-203ENST00000413184 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
CPSF7-203ENST00000413184 LARP1Q6PKG0 1096 aaKnown RBP11.38□□□□□ -0.59
CPSF7-203ENST00000413184 KIAA0232Q92628 1395 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms