RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 BECN1Q14457 450 aa17.58■□□□□ 0.4
NUB1-201ENST00000413040 GSE1Q14687 1217 aa17.58■□□□□ 0.4
NUB1-201ENST00000413040 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
NUB1-201ENST00000413040 SHPRHQ149N8 1683 aa17.58■□□□□ 0.4
NUB1-201ENST00000413040 THUMPD2Q9BTF0 503 aaKnown RBP17.58■□□□□ 0.4
NUB1-201ENST00000413040 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
NUB1-201ENST00000413040 ABCC11Q96J66 1382 aa17.57■□□□□ 0.4
NUB1-201ENST00000413040 USP19O94966 1318 aa17.57■□□□□ 0.4
NUB1-201ENST00000413040 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
NUB1-201ENST00000413040 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
NUB1-201ENST00000413040 NEXMIFQ5QGS0 1516 aa17.56■□□□□ 0.4
NUB1-201ENST00000413040 CAMSAP1Q5T5Y3 1602 aa17.56■□□□□ 0.4
NUB1-201ENST00000413040 SIGLEC1Q9BZZ2 1709 aa17.56■□□□□ 0.4
NUB1-201ENST00000413040 ATF7IPQ6VMQ6 1270 aa17.56■□□□□ 0.4
NUB1-201ENST00000413040 CFAP74Q9C0B2 1584 aa17.55■□□□□ 0.4
NUB1-201ENST00000413040 MFAP1P55081 439 aaKnown RBP17.55■□□□□ 0.4
NUB1-201ENST00000413040 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
NUB1-201ENST00000413040 YTHDC2Q9H6S0 1430 aaKnown RBP17.54■□□□□ 0.4
NUB1-201ENST00000413040 DDX19BQ9UMR2 479 aa17.54■□□□□ 0.4
NUB1-201ENST00000413040 NEO1Q92859 1461 aa17.54■□□□□ 0.4
NUB1-201ENST00000413040 AAMPQ13685 434 aa17.53■□□□□ 0.4
NUB1-201ENST00000413040 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
NUB1-201ENST00000413040 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
NUB1-201ENST00000413040 DIP2CQ9Y2E4 1556 aa17.52■□□□□ 0.4
NUB1-201ENST00000413040 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.39
NUB1-201ENST00000413040 NUTM2FA1L443 756 aa17.52■□□□□ 0.39
NUB1-201ENST00000413040 ESF1Q9H501 851 aaKnown RBP17.52■□□□□ 0.39
NUB1-201ENST00000413040 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.39
NUB1-201ENST00000413040 ZC3H13Q5T200 1668 aaKnown RBP17.51■□□□□ 0.39
NUB1-201ENST00000413040 TXNDC2Q86VQ3 553 aa17.51■□□□□ 0.39
NUB1-201ENST00000413040 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
NUB1-201ENST00000413040 IPO8O15397 1037 aaKnown RBP17.5■□□□□ 0.39
NUB1-201ENST00000413040 ARXQ96QS3 562 aa17.5■□□□□ 0.39
NUB1-201ENST00000413040 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
NUB1-201ENST00000413040 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
NUB1-201ENST00000413040 NME9Q86XW9 330 aa17.5■□□□□ 0.39
NUB1-201ENST00000413040 PHACTR3Q96KR7 559 aa17.5■□□□□ 0.39
NUB1-201ENST00000413040 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
NUB1-201ENST00000413040 PIK3C2BO00750 1634 aa17.49■□□□□ 0.39
NUB1-201ENST00000413040 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
NUB1-201ENST00000413040 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
NUB1-201ENST00000413040 SOX12O15370 315 aa17.48■□□□□ 0.39
NUB1-201ENST00000413040 C1orf115Q9H7X2 142 aa17.48■□□□□ 0.39
NUB1-201ENST00000413040 FCHSD2O94868 740 aa17.48■□□□□ 0.39
NUB1-201ENST00000413040 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
NUB1-201ENST00000413040 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
NUB1-201ENST00000413040 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
NUB1-201ENST00000413040 MYO5BQ9ULV0 1848 aa17.46■□□□□ 0.39
NUB1-201ENST00000413040 PTPRMP28827 1452 aa17.46■□□□□ 0.39
NUB1-201ENST00000413040 KIF16BQ96L93 1317 aa17.46■□□□□ 0.39
NUB1-201ENST00000413040 TBC1D2Q9BYX2 928 aa17.46■□□□□ 0.39
NUB1-201ENST00000413040 TSPYL6Q8N831 410 aa17.45■□□□□ 0.38
NUB1-201ENST00000413040 C22orf23Q9BZE7 217 aa17.44■□□□□ 0.38
NUB1-201ENST00000413040 RSPH6AQ9H0K4 717 aa17.44■□□□□ 0.38
NUB1-201ENST00000413040 ZFYVE9O95405 1425 aa17.44■□□□□ 0.38
NUB1-201ENST00000413040 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
NUB1-201ENST00000413040 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
NUB1-201ENST00000413040 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
NUB1-201ENST00000413040 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
NUB1-201ENST00000413040 IL16Q14005 1332 aa17.43■□□□□ 0.38
NUB1-201ENST00000413040 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
NUB1-201ENST00000413040 COG3Q96JB2 828 aa17.42■□□□□ 0.38
NUB1-201ENST00000413040 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
NUB1-201ENST00000413040 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
NUB1-201ENST00000413040 CD163L1Q9NR16 1453 aa17.42■□□□□ 0.38
NUB1-201ENST00000413040 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
NUB1-201ENST00000413040 WASLO00401 505 aaPredicted RBP17.41■□□□□ 0.38
NUB1-201ENST00000413040 NUDT16Q96DE0 195 aaKnown RBP17.41■□□□□ 0.38
NUB1-201ENST00000413040 ALKQ9UM73 1620 aa17.39■□□□□ 0.37
NUB1-201ENST00000413040 SMC5Q8IY18 1101 aa17.39■□□□□ 0.37
NUB1-201ENST00000413040 RIMS2Q9UQ26 1411 aa17.39■□□□□ 0.37
NUB1-201ENST00000413040 TMEM131LA2VDJ0 1609 aa17.39■□□□□ 0.37
NUB1-201ENST00000413040 VAMP4O75379 141 aa17.38■□□□□ 0.37
NUB1-201ENST00000413040 COL3A1P02461 1466 aaPredicted RBP17.38■□□□□ 0.37
NUB1-201ENST00000413040 GNAI1P63096 354 aa17.38■□□□□ 0.37
NUB1-201ENST00000413040 TWISTNBQ3B726 338 aaPredicted RBP17.38■□□□□ 0.37
NUB1-201ENST00000413040 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
NUB1-201ENST00000413040 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
NUB1-201ENST00000413040 ALDH1L2Q3SY69 923 aa17.38■□□□□ 0.37
NUB1-201ENST00000413040 ADGRB2O60241 1585 aa17.37■□□□□ 0.37
NUB1-201ENST00000413040 GZF1Q9H116 711 aaPredicted RBP17.37■□□□□ 0.37
NUB1-201ENST00000413040 CALD1Q05682 793 aaKnown RBP17.37■□□□□ 0.37
NUB1-201ENST00000413040 CCDC61Q9Y6R9 512 aa17.37■□□□□ 0.37
NUB1-201ENST00000413040 RICTORQ6R327 1708 aa17.37■□□□□ 0.37
NUB1-201ENST00000413040 NLRP1Q9C000 1473 aa17.37■□□□□ 0.37
NUB1-201ENST00000413040 ARHGEF40Q8TER5 1519 aa17.36■□□□□ 0.37
NUB1-201ENST00000413040 TSPOAP1O95153 1857 aa17.36■□□□□ 0.37
NUB1-201ENST00000413040 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
NUB1-201ENST00000413040 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
NUB1-201ENST00000413040 PPIP5K1Q6PFW1 1433 aa17.36■□□□□ 0.37
NUB1-201ENST00000413040 IL13P35225 146 aa17.36■□□□□ 0.37
NUB1-201ENST00000413040 C8orf58Q8NAV2 365 aa17.36■□□□□ 0.37
NUB1-201ENST00000413040 HSCBQ8IWL3 235 aa17.35■□□□□ 0.37
NUB1-201ENST00000413040 APBB1O00213 710 aa17.35■□□□□ 0.37
NUB1-201ENST00000413040 METP08581 1390 aa17.35■□□□□ 0.37
NUB1-201ENST00000413040 SULT6B1Q6IMI4 303 aa17.34■□□□□ 0.37
NUB1-201ENST00000413040 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
NUB1-201ENST00000413040 MRPL50Q8N5N7 158 aaKnown RBP17.34■□□□□ 0.37
NUB1-201ENST00000413040 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
NUB1-201ENST00000413040 NUCB1Q02818 461 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms