RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 MAPK8IP3Q9UPT6 1336 aa14.8□□□□□ -0.04
TRAFD1-202ENST00000412615 CT47B1P0C2W7 299 aaPredicted RBP14.8□□□□□ -0.04
TRAFD1-202ENST00000412615 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
TRAFD1-202ENST00000412615 TMPOP42166 694 aaKnown RBP14.79□□□□□ -0.04
TRAFD1-202ENST00000412615 WAPLQ7Z5K2 1190 aa14.79□□□□□ -0.04
TRAFD1-202ENST00000412615 DDRGK1Q96HY6 314 aa14.79□□□□□ -0.04
TRAFD1-202ENST00000412615 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
TRAFD1-202ENST00000412615 IGHDP01880 384 aa14.78□□□□□ -0.04
TRAFD1-202ENST00000412615 HDGFP51858 240 aaKnown RBP14.78□□□□□ -0.04
TRAFD1-202ENST00000412615 ATP7BP35670 1465 aa14.78□□□□□ -0.04
TRAFD1-202ENST00000412615 RGS3P49796 1198 aa14.77□□□□□ -0.04
TRAFD1-202ENST00000412615 ZMYM3Q14202 1370 aa14.77□□□□□ -0.05
TRAFD1-202ENST00000412615 IL16Q14005 1332 aa14.76□□□□□ -0.05
TRAFD1-202ENST00000412615 C8orf34Q49A92 452 aa14.76□□□□□ -0.05
TRAFD1-202ENST00000412615 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
TRAFD1-202ENST00000412615 TRIM35Q9UPQ4 493 aa14.76□□□□□ -0.05
TRAFD1-202ENST00000412615 BCL2L13Q9BXK5 485 aa14.75□□□□□ -0.05
TRAFD1-202ENST00000412615 SETD1AO15047 1707 aaKnown RBP14.75□□□□□ -0.05
TRAFD1-202ENST00000412615 WASLO00401 505 aaPredicted RBP14.75□□□□□ -0.05
TRAFD1-202ENST00000412615 NBR1Q14596 966 aa14.75□□□□□ -0.05
TRAFD1-202ENST00000412615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRAFD1-202ENST00000412615 FCHSD2O94868 740 aa14.74□□□□□ -0.05
TRAFD1-202ENST00000412615 SIRT1Q96EB6 747 aa14.74□□□□□ -0.05
TRAFD1-202ENST00000412615 KIF20BQ96Q89 1820 aa14.74□□□□□ -0.05
TRAFD1-202ENST00000412615 RIPK4P57078 832 aa14.74□□□□□ -0.05
TRAFD1-202ENST00000412615 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
TRAFD1-202ENST00000412615 TSR2Q969E8 191 aaKnown RBP14.73□□□□□ -0.05
TRAFD1-202ENST00000412615 RLBP1P12271 317 aa14.73□□□□□ -0.05
TRAFD1-202ENST00000412615 METP08581 1390 aa14.73□□□□□ -0.05
TRAFD1-202ENST00000412615 NEFMP07197 916 aa14.72□□□□□ -0.05
TRAFD1-202ENST00000412615 EXOSC9Q06265 439 aaKnown RBP14.72□□□□□ -0.05
TRAFD1-202ENST00000412615 POLKQ9UBT6 870 aa14.72□□□□□ -0.05
TRAFD1-202ENST00000412615 CPSF1Q10570 1443 aaKnown RBP14.72□□□□□ -0.05
TRAFD1-202ENST00000412615 FAM135BQ49AJ0 1406 aa14.71□□□□□ -0.05
TRAFD1-202ENST00000412615 EDC4Q6P2E9 1401 aaKnown RBP14.71□□□□□ -0.05
TRAFD1-202ENST00000412615 NRXN3Q9Y4C0 1643 aa14.71□□□□□ -0.05
TRAFD1-202ENST00000412615 MVPQ14764 893 aaKnown RBP14.71□□□□□ -0.05
TRAFD1-202ENST00000412615 TXNDC2Q86VQ3 553 aa14.71□□□□□ -0.05
TRAFD1-202ENST00000412615 TNNQ9UQP3 1299 aa14.71□□□□□ -0.05
TRAFD1-202ENST00000412615 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
TRAFD1-202ENST00000412615 TNRQ92752 1358 aa14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 PPM1GO15355 546 aaPredicted RBP14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 FTSJ3Q8IY81 847 aaKnown RBP14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 DZIP1LQ8IYY4 767 aaKnown RBP14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 CDC42BPGQ6DT37 1551 aa14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 RWDD1Q9H446 243 aaPredicted RBP14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 PCDHB15Q9Y5E8 787 aa14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 CCDC61Q9Y6R9 512 aa14.7□□□□□ -0.06
TRAFD1-202ENST00000412615 RTL5Q5HYW3 569 aaPredicted RBP14.69□□□□□ -0.06
TRAFD1-202ENST00000412615 NUDT16Q96DE0 195 aaKnown RBP14.69□□□□□ -0.06
TRAFD1-202ENST00000412615 TECPR2O15040 1411 aa14.69□□□□□ -0.06
TRAFD1-202ENST00000412615 RSPH6AQ9H0K4 717 aa14.69□□□□□ -0.06
TRAFD1-202ENST00000412615 KIF13AQ9H1H9 1805 aa14.68□□□□□ -0.06
TRAFD1-202ENST00000412615 PRKAR2BP31323 418 aa14.68□□□□□ -0.06
TRAFD1-202ENST00000412615 SSH1Q8WYL5 1049 aa14.68□□□□□ -0.06
TRAFD1-202ENST00000412615 FBLN1P23142 703 aa14.67□□□□□ -0.06
TRAFD1-202ENST00000412615 DAXXQ9UER7 740 aaPredicted RBP14.67□□□□□ -0.06
TRAFD1-202ENST00000412615 AATKQ6ZMQ8 1374 aa14.67□□□□□ -0.06
TRAFD1-202ENST00000412615 TMEM2Q9UHN6 1383 aa14.67□□□□□ -0.06
TRAFD1-202ENST00000412615 NME9Q86XW9 330 aa14.67□□□□□ -0.06
TRAFD1-202ENST00000412615 COG3Q96JB2 828 aa14.66□□□□□ -0.06
TRAFD1-202ENST00000412615 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
TRAFD1-202ENST00000412615 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
TRAFD1-202ENST00000412615 LRRC7Q96NW7 1537 aa14.66□□□□□ -0.06
TRAFD1-202ENST00000412615 ATF7IPQ6VMQ6 1270 aa14.66□□□□□ -0.06
TRAFD1-202ENST00000412615 IPO8O15397 1037 aaKnown RBP14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 TRIM27P14373 513 aa14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 NFE2L2Q16236 605 aa14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 DDX19BQ9UMR2 479 aa14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 ALDH1L2Q3SY69 923 aa14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 ZNF428Q96B54 188 aa14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 EMILIN1Q9Y6C2 1016 aa14.65□□□□□ -0.06
TRAFD1-202ENST00000412615 CPS1P31327 1500 aa14.64□□□□□ -0.07
TRAFD1-202ENST00000412615 KIF16BQ96L93 1317 aa14.64□□□□□ -0.07
TRAFD1-202ENST00000412615 IL13P35225 146 aa14.64□□□□□ -0.07
TRAFD1-202ENST00000412615 CDK12Q9NYV4 1490 aaPredicted RBP14.64□□□□□ -0.07
TRAFD1-202ENST00000412615 USP35Q9P2H5 1018 aa14.64□□□□□ -0.07
TRAFD1-202ENST00000412615 NOB1Q9ULX3 412 aaKnown RBP14.64□□□□□ -0.07
TRAFD1-202ENST00000412615 PDZRN3Q9UPQ7 1066 aa14.64□□□□□ -0.07
TRAFD1-202ENST00000412615 DEKP35659 375 aaKnown RBP14.63□□□□□ -0.07
TRAFD1-202ENST00000412615 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
TRAFD1-202ENST00000412615 HMOX1P09601 288 aa14.63□□□□□ -0.07
TRAFD1-202ENST00000412615 MAP2P11137 1827 aaKnown RBP14.63□□□□□ -0.07
TRAFD1-202ENST00000412615 PHACTR3Q96KR7 559 aa14.62□□□□□ -0.07
TRAFD1-202ENST00000412615 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
TRAFD1-202ENST00000412615 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
TRAFD1-202ENST00000412615 NCKAP5LQ9HCH0 1330 aa14.62□□□□□ -0.07
TRAFD1-202ENST00000412615 UBR1Q8IWV7 1749 aa14.61□□□□□ -0.07
TRAFD1-202ENST00000412615 HDAC1Q13547 482 aaPredicted RBP14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 PRR36Q9H6K5 1346 aa14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 ROBO2Q9HCK4 1378 aa14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 MON2Q7Z3U7 1717 aa14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 ADAMTS13Q76LX8 1427 aa14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 BRPF1P55201 1214 aaPredicted RBP14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 GNAI1P63096 354 aa14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 PLEKHG1Q9ULL1 1385 aa14.6□□□□□ -0.07
TRAFD1-202ENST00000412615 IFT57Q9NWB7 429 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms