RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 RFC1P35251 1148 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 PHLDB2Q86SQ0 1253 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 ESPNB1AK53 854 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 RNF8O76064 485 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 CFAP100Q494V2 611 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 CCDC181Q5TID7 509 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 ARMC9Q7Z3E5 817 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 SPATS2LQ9NUQ6 558 aaKnown RBP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 TAF7Q15545 349 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 PRR16Q569H4 304 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 GBP7Q8N8V2 638 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 MIER1Q8N108 512 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 GOLIM4O00461 696 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 IPO8O15397 1037 aaKnown RBP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 ZRANB2O95218 330 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 DNAJC21Q5F1R6 531 aaKnown RBP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 ZCRB1Q8TBF4 217 aaKnown RBP5.42□□□□□ -1.54
PTPN13-202ENST00000411767 CTAGE1Q96RT6 745 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 CLIP2Q9UDT6 1046 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 SH2D4BQ5SQS7 431 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 MSANTD4Q8NCY6 345 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 SMC1BQ8NDV3 1235 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 FERMT1Q9BQL6 677 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 SPC25Q9HBM1 224 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 DAAM1Q9Y4D1 1078 aa5.42□□□□□ -1.54
PTPN13-202ENST00000411767 CASQ2O14958 399 aaPredicted RBP5.41□□□□□ -1.54
PTPN13-202ENST00000411767 RBM25P49756 843 aaKnown RBP5.41□□□□□ -1.54
PTPN13-202ENST00000411767 KLHL10Q6JEL2 608 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 PSPC1Q8WXF1 523 aaKnown RBP5.41□□□□□ -1.54
PTPN13-202ENST00000411767 MAGEC2Q9UBF1 373 aaPredicted RBP5.41□□□□□ -1.54
PTPN13-202ENST00000411767 WDR78Q5VTH9 848 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 BRMS1Q9HCU9 246 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 UQCRHLA0A096LP55 91 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 CCDC160A6NGH7 325 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 DBN1Q16643 649 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 POTEB2H3BUK9 544 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 SMC3Q9UQE7 1217 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 SRPK2P78362 688 aaKnown RBP5.41□□□□□ -1.54
PTPN13-202ENST00000411767 SATB2Q9UPW6 733 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 PRPF40AO75400 957 aaKnown RBP5.41□□□□□ -1.54
PTPN13-202ENST00000411767 SKIDA1Q1XH10 827 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 FMNL2Q96PY5 1086 aa5.41□□□□□ -1.54
PTPN13-202ENST00000411767 RAP1GDS1P52306 607 aa5.4□□□□□ -1.54
PTPN13-202ENST00000411767 NEUROD2Q15784 382 aa5.4□□□□□ -1.54
PTPN13-202ENST00000411767 CEP57L1Q8IYX8 460 aa5.4□□□□□ -1.54
PTPN13-202ENST00000411767 PDCD7Q8N8D1 485 aaKnown RBP5.4□□□□□ -1.54
PTPN13-202ENST00000411767 KIAA1524Q8TCG1 905 aa5.4□□□□□ -1.54
PTPN13-202ENST00000411767 RGS3P49796 1198 aa5.4□□□□□ -1.54
PTPN13-202ENST00000411767 CACYBPQ9HB71 228 aaKnown RBP5.4□□□□□ -1.54
PTPN13-202ENST00000411767 MAP7Q14244 749 aa5.4□□□□□ -1.54
PTPN13-202ENST00000411767 CCDC14Q49A88 953 aa5.4□□□□□ -1.54
PTPN13-202ENST00000411767 NOC2LQ9Y3T9 749 aaKnown RBP5.4□□□□□ -1.54
PTPN13-202ENST00000411767 PDCLQ13371 301 aa5.4□□□□□ -1.55
PTPN13-202ENST00000411767 ANGPT1Q15389 498 aa5.4□□□□□ -1.55
PTPN13-202ENST00000411767 CACNA2D3Q8IZS8 1091 aa5.4□□□□□ -1.55
PTPN13-202ENST00000411767 IFT57Q9NWB7 429 aa5.4□□□□□ -1.55
PTPN13-202ENST00000411767 TOMM22Q9NS69 142 aa5.4□□□□□ -1.55
PTPN13-202ENST00000411767 LMNB2Q03252 620 aa5.4□□□□□ -1.55
PTPN13-202ENST00000411767 TSPYL2Q9H2G4 693 aaPredicted RBP5.4□□□□□ -1.55
PTPN13-202ENST00000411767 SARNPP82979 210 aaKnown RBP5.4□□□□□ -1.55
PTPN13-202ENST00000411767 DNAJC8O75937 253 aaPredicted RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 TDO2P48775 406 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 MRPS9P82933 396 aaKnown RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 SASS6Q6UVJ0 657 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 GPATCH11Q8N954 259 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 KIF7Q2M1P5 1343 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 NPM1P06748 294 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 LIG1P18858 919 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 MAP7D1Q3KQU3 841 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 GZF1Q9H116 711 aaPredicted RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 FRAT2O75474 233 aaPredicted RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 CALCOCO1Q9P1Z2 691 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 CGNQ9P2M7 1197 aaKnown RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 CACTINQ8WUQ7 758 aaKnown RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 PIBF1Q8WXW3 757 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 WDHD1O75717 1129 aaPredicted RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 SYF2O95926 243 aaKnown RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 SLMAPQ14BN4 828 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 SAFBQ15424 915 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC40Q4G0X9 1142 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 VCX3BQ9H321 246 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 MACROD2A1Z1Q3 448 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 AIMP1Q12904 312 aaKnown RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 ERMNQ8TAM6 284 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 STMN4Q9H169 189 aaPredicted RBP5.39□□□□□ -1.55
PTPN13-202ENST00000411767 DIABLOQ9NR28 239 aa5.39□□□□□ -1.55
PTPN13-202ENST00000411767 LUC7L3O95232 432 aaKnown RBP5.38□□□□□ -1.55
PTPN13-202ENST00000411767 USP37Q86T82 979 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 BICDL2A1A5D9 508 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 RGS22Q8NE09 1264 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 C16orf45Q96MC5 204 aaPredicted RBP5.38□□□□□ -1.55
PTPN13-202ENST00000411767 PDE3BQ13370 1112 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 KIF6Q6ZMV9 814 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 WASHC2AQ641Q2 1341 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 XBP1P17861 261 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 SLC4A8Q2Y0W8 1093 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 CACNA2D4Q7Z3S7 1137 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 FBF1Q8TES7 1133 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 CCDC129Q6ZRS4 1044 aa5.38□□□□□ -1.55
PTPN13-202ENST00000411767 PAWRQ96IZ0 340 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms