RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 RSBN1LQ6PCB5 846 aaPredicted RBP4.43□□□□□ -1.7
RNU2-55P-201ENST00000411146 MAP10Q9P2G4 905 aa4.43□□□□□ -1.7
RNU2-55P-201ENST00000411146 LIMD1Q9UGP4 676 aa4.43□□□□□ -1.7
RNU2-55P-201ENST00000411146 CAPN5O15484 640 aaPredicted RBP4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 INSM1Q01101 510 aaPredicted RBP4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 MTMR2Q13614 643 aa4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 QPCTQ16769 361 aa4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 PTPRNQ16849 979 aa4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 LYPD8Q6UX82 237 aa4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 ZNF511Q8NB15 262 aa4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 KIFC2Q96AC6 838 aa4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 ZFP42Q96MM3 310 aa4.42□□□□□ -1.7
RNU2-55P-201ENST00000411146 SPTLC1O15269 473 aa4.41□□□□□ -1.7
RNU2-55P-201ENST00000411146 CTHP32929 405 aa4.41□□□□□ -1.7
RNU2-55P-201ENST00000411146 KLF16Q9BXK1 252 aaPredicted RBP4.41□□□□□ -1.7
RNU2-55P-201ENST00000411146 WASF2Q9Y6W5 498 aa4.41□□□□□ -1.7
RNU2-55P-201ENST00000411146 ERBB4Q15303 1308 aa4.41□□□□□ -1.7
RNU2-55P-201ENST00000411146 F12P00748 615 aaPredicted RBP4.4□□□□□ -1.71
RNU2-55P-201ENST00000411146 GMPRP36959 345 aa4.4□□□□□ -1.71
RNU2-55P-201ENST00000411146 RTL5Q5HYW3 569 aaPredicted RBP4.4□□□□□ -1.71
RNU2-55P-201ENST00000411146 RIC3Q7Z5B4 369 aa4.4□□□□□ -1.71
RNU2-55P-201ENST00000411146 ZFAND3Q9H8U3 227 aa4.4□□□□□ -1.71
RNU2-55P-201ENST00000411146 SLC24A3Q9HC58 644 aa4.4□□□□□ -1.71
RNU2-55P-201ENST00000411146 NR3C2P08235 984 aa4.39□□□□□ -1.71
RNU2-55P-201ENST00000411146 TIMP2P16035 220 aa4.39□□□□□ -1.71
RNU2-55P-201ENST00000411146 GRM5P41594 1212 aa4.39□□□□□ -1.71
RNU2-55P-201ENST00000411146 NNTQ13423 1086 aa4.39□□□□□ -1.71
RNU2-55P-201ENST00000411146 NXF1Q9UBU9 619 aaKnown RBP4.39□□□□□ -1.71
RNU2-55P-201ENST00000411146 WDR4P57081 412 aaKnown RBP4.38□□□□□ -1.71
RNU2-55P-201ENST00000411146 PDE4DQ08499 809 aa4.38□□□□□ -1.71
RNU2-55P-201ENST00000411146 ARID5BQ14865 1188 aa4.38□□□□□ -1.71
RNU2-55P-201ENST00000411146 MYSM1Q5VVJ2 828 aa4.38□□□□□ -1.71
RNU2-55P-201ENST00000411146 DESI1Q6ICB0 168 aa4.38□□□□□ -1.71
RNU2-55P-201ENST00000411146 AK7Q96M32 723 aa4.38□□□□□ -1.71
RNU2-55P-201ENST00000411146 PURBQ96QR8 312 aaKnown RBP4.38□□□□□ -1.71
RNU2-55P-201ENST00000411146 VARSP26640 1264 aaKnown RBP4.37□□□□□ -1.71
RNU2-55P-201ENST00000411146 NPAS3Q8IXF0 933 aa4.37□□□□□ -1.71
RNU2-55P-201ENST00000411146 TSC1Q92574 1164 aa4.37□□□□□ -1.71
RNU2-55P-201ENST00000411146 ITPKCQ96DU7 683 aa4.37□□□□□ -1.71
RNU2-55P-201ENST00000411146 POLR3EQ9NVU0 708 aa4.37□□□□□ -1.71
RNU2-55P-201ENST00000411146 H3BM21 787 aa4.36□□□□□ -1.71
RNU2-55P-201ENST00000411146 LILRB3O75022 631 aa4.36□□□□□ -1.71
RNU2-55P-201ENST00000411146 MRPL14Q6P1L8 145 aaKnown RBP4.36□□□□□ -1.71
RNU2-55P-201ENST00000411146 MPNDQ8N594 471 aa4.36□□□□□ -1.71
RNU2-55P-201ENST00000411146 ZBTB3Q9H5J0 574 aa4.36□□□□□ -1.71
RNU2-55P-201ENST00000411146 SPDYE5A6NIY4 337 aa4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 ZIC2O95409 532 aaPredicted RBP4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 GJA5P36382 358 aa4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 CTDSPL2Q05D32 466 aa4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 C6orf118Q5T5N4 469 aa4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 PROCA1Q8NCQ7 364 aaPredicted RBP4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 SLC16A10Q8TF71 515 aa4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 CDK15Q96Q40 435 aa4.35□□□□□ -1.71
RNU2-55P-201ENST00000411146 NUTM2BA6NNL0 878 aaPredicted RBP4.34□□□□□ -1.71
RNU2-55P-201ENST00000411146 NUTM2EB1AL46 878 aaPredicted RBP4.34□□□□□ -1.71
RNU2-55P-201ENST00000411146 ADH1CP00326 375 aa4.34□□□□□ -1.71
RNU2-55P-201ENST00000411146 NUTM2DQ5VT03 806 aaPredicted RBP4.34□□□□□ -1.71
RNU2-55P-201ENST00000411146 NUTM2AQ8IVF1 878 aaPredicted RBP4.34□□□□□ -1.71
RNU2-55P-201ENST00000411146 FAM174AQ8TBP5 190 aa4.34□□□□□ -1.71
RNU2-55P-201ENST00000411146 IRF7Q92985 503 aa4.34□□□□□ -1.71
RNU2-55P-201ENST00000411146 AGERQ15109 404 aa4.33□□□□□ -1.72
RNU2-55P-201ENST00000411146 PRPF38BQ5VTL8 546 aaKnown RBP4.33□□□□□ -1.72
RNU2-55P-201ENST00000411146 SH3RF1Q7Z6J0 888 aa4.33□□□□□ -1.72
RNU2-55P-201ENST00000411146 GPR161Q8N6U8 529 aaKnown RBP4.33□□□□□ -1.72
RNU2-55P-201ENST00000411146 ZSCAN1Q8NBB4 408 aa4.33□□□□□ -1.72
RNU2-55P-201ENST00000411146 LRRN4Q8WUT4 740 aa4.33□□□□□ -1.72
RNU2-55P-201ENST00000411146 PLEKHG3A1L390 1219 aa4.32□□□□□ -1.72
RNU2-55P-201ENST00000411146 CBLBQ13191 982 aa4.32□□□□□ -1.72
RNU2-55P-201ENST00000411146 EPS8L1Q8TE68 723 aa4.32□□□□□ -1.72
RNU2-55P-201ENST00000411146 OCSTAMPQ9BR26 566 aa4.32□□□□□ -1.72
RNU2-55P-201ENST00000411146 GPBP1L1Q9HC44 474 aaPredicted RBP4.32□□□□□ -1.72
RNU2-55P-201ENST00000411146 MAGEB6P1A0A0J9YX57 407 aa4.31□□□□□ -1.72
RNU2-55P-201ENST00000411146 FIGNL2A6NMB9 653 aa4.31□□□□□ -1.72
RNU2-55P-201ENST00000411146 VSIG8P0DPA2 414 aa4.31□□□□□ -1.72
RNU2-55P-201ENST00000411146 SH3BP5LQ7L8J4 393 aa4.31□□□□□ -1.72
RNU2-55P-201ENST00000411146 C1QTNF2Q9BXJ5 285 aa4.31□□□□□ -1.72
RNU2-55P-201ENST00000411146 CARD14Q9BXL6 1004 aa4.31□□□□□ -1.72
RNU2-55P-201ENST00000411146 DNMT3LQ9UJW3 386 aa4.31□□□□□ -1.72
RNU2-55P-201ENST00000411146 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 FAM181BA6NEQ2 426 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 PPFIA3O75145 1194 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 CLK2P49760 499 aaKnown RBP4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 KRT76Q01546 638 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 SCARF1Q14162 830 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 NR6A1Q15406 480 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 DIXDC1Q155Q3 683 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 FAM117AQ9C073 453 aa4.3□□□□□ -1.72
RNU2-55P-201ENST00000411146 SOS2Q07890 1332 aaPredicted RBP4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 BMP2P12643 396 aa4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 FSHRP23945 695 aa4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 NR5A1Q13285 461 aa4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 TUSC1Q2TAM9 212 aa4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 ERFEQ4G0M1 354 aa4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 BPHLQ86WA6 291 aaPredicted RBP4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 AGBL1Q96MI9 1066 aa4.29□□□□□ -1.72
RNU2-55P-201ENST00000411146 MAN1A2O60476 641 aa4.28□□□□□ -1.72
RNU2-55P-201ENST00000411146 GSK3AP49840 483 aa4.28□□□□□ -1.72
RNU2-55P-201ENST00000411146 VASH1Q7L8A9 365 aaPredicted RBP4.28□□□□□ -1.72
RNU2-55P-201ENST00000411146 LINC00528Q8N1L1 170 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms