RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 USP6P35125 1406 aa19.87■□□□□ 0.77
LIMS2-209ENST00000410038 HDGFL2Q7Z4V5 671 aaPredicted RBP19.87■□□□□ 0.77
LIMS2-209ENST00000410038 RGS17Q9UGC6 210 aaPredicted RBP19.87■□□□□ 0.77
LIMS2-209ENST00000410038 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
LIMS2-209ENST00000410038 KTN1Q86UP2 1357 aaKnown RBP19.86■□□□□ 0.77
LIMS2-209ENST00000410038 SSH2Q76I76 1423 aa19.84■□□□□ 0.77
LIMS2-209ENST00000410038 PANK3Q9H999 370 aa19.83■□□□□ 0.76
LIMS2-209ENST00000410038 ALS2Q96Q42 1657 aa19.83■□□□□ 0.76
LIMS2-209ENST00000410038 SBNO1A3KN83 1393 aa19.82■□□□□ 0.76
LIMS2-209ENST00000410038 BRD4O60885 1362 aaPredicted RBP19.82■□□□□ 0.76
LIMS2-209ENST00000410038 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
LIMS2-209ENST00000410038 EDC4Q6P2E9 1401 aaKnown RBP19.81■□□□□ 0.76
LIMS2-209ENST00000410038 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
LIMS2-209ENST00000410038 LRRC59Q96AG4 307 aaKnown RBP19.81■□□□□ 0.76
LIMS2-209ENST00000410038 SPATA31A3Q5VYP0 1347 aa19.81■□□□□ 0.76
LIMS2-209ENST00000410038 SPATA31A6Q5VVP1 1343 aa19.8■□□□□ 0.76
LIMS2-209ENST00000410038 TNS3Q68CZ2 1445 aa19.8■□□□□ 0.76
LIMS2-209ENST00000410038 TTC21BQ7Z4L5 1316 aa19.8■□□□□ 0.76
LIMS2-209ENST00000410038 PIK3C2AO00443 1686 aa19.79■□□□□ 0.76
LIMS2-209ENST00000410038 NSD3Q9BZ95 1437 aa19.79■□□□□ 0.76
LIMS2-209ENST00000410038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.78■□□□□ 0.76
LIMS2-209ENST00000410038 TTC21AQ8NDW8 1320 aa19.77■□□□□ 0.76
LIMS2-209ENST00000410038 KIF20BQ96Q89 1820 aa19.77■□□□□ 0.75
LIMS2-209ENST00000410038 SHPRHQ149N8 1683 aa19.76■□□□□ 0.75
LIMS2-209ENST00000410038 LMOD2Q6P5Q4 547 aa19.76■□□□□ 0.75
LIMS2-209ENST00000410038 POTEAQ6S8J7 498 aa19.76■□□□□ 0.75
LIMS2-209ENST00000410038 DDX10Q13206 875 aaKnown RBP19.75■□□□□ 0.75
LIMS2-209ENST00000410038 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
LIMS2-209ENST00000410038 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
LIMS2-209ENST00000410038 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
LIMS2-209ENST00000410038 MARF1Q9Y4F3 1742 aaKnown RBP19.74■□□□□ 0.75
LIMS2-209ENST00000410038 PNPLA6Q8IY17 1366 aa19.74■□□□□ 0.75
LIMS2-209ENST00000410038 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
LIMS2-209ENST00000410038 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
LIMS2-209ENST00000410038 NME9Q86XW9 330 aa19.73■□□□□ 0.75
LIMS2-209ENST00000410038 CRYBG1Q9Y4K1 1723 aa19.73■□□□□ 0.75
LIMS2-209ENST00000410038 USP54Q70EL1 1684 aa19.72■□□□□ 0.75
LIMS2-209ENST00000410038 KNSTRNQ9Y448 316 aa19.71■□□□□ 0.75
LIMS2-209ENST00000410038 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
LIMS2-209ENST00000410038 FYB1O15117 783 aa19.71■□□□□ 0.75
LIMS2-209ENST00000410038 ZRANB1Q9UGI0 708 aa19.71■□□□□ 0.75
LIMS2-209ENST00000410038 CGNL1Q0VF96 1302 aa19.7■□□□□ 0.74
LIMS2-209ENST00000410038 NLRP6P59044 892 aa19.7■□□□□ 0.74
LIMS2-209ENST00000410038 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
LIMS2-209ENST00000410038 ANKRD26Q9UPS8 1709 aa19.7■□□□□ 0.74
LIMS2-209ENST00000410038 USP31Q70CQ4 1352 aa19.69■□□□□ 0.74
LIMS2-209ENST00000410038 MEX3CQ5U5Q3 659 aaKnown RBP19.69■□□□□ 0.74
LIMS2-209ENST00000410038 NLRP13Q86W25 1043 aa19.69■□□□□ 0.74
LIMS2-209ENST00000410038 PHRF1Q9P1Y6 1649 aaKnown RBP19.69■□□□□ 0.74
LIMS2-209ENST00000410038 GGNBP2Q9H3C7 697 aa19.68■□□□□ 0.74
LIMS2-209ENST00000410038 OVOS2A0A0J9YW53 1432 aa19.68■□□□□ 0.74
LIMS2-209ENST00000410038 OVOS2Q6IE36 1432 aa19.68■□□□□ 0.74
LIMS2-209ENST00000410038 PLEKHG5O94827 1062 aa19.68■□□□□ 0.74
LIMS2-209ENST00000410038 CABLES1Q8TDN4 633 aa19.68■□□□□ 0.74
LIMS2-209ENST00000410038 AMER1Q5JTC6 1135 aaPredicted RBP19.67■□□□□ 0.74
LIMS2-209ENST00000410038 LRP6O75581 1613 aa19.67■□□□□ 0.74
LIMS2-209ENST00000410038 USP19O94966 1318 aa19.67■□□□□ 0.74
LIMS2-209ENST00000410038 SLIT3O75094 1523 aa19.66■□□□□ 0.74
LIMS2-209ENST00000410038 COG3Q96JB2 828 aa19.65■□□□□ 0.74
LIMS2-209ENST00000410038 NSD2O96028 1365 aa19.64■□□□□ 0.74
LIMS2-209ENST00000410038 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
LIMS2-209ENST00000410038 NUTM2BA6NNL0 878 aaPredicted RBP19.62■□□□□ 0.73
LIMS2-209ENST00000410038 NUTM2EB1AL46 878 aaPredicted RBP19.62■□□□□ 0.73
LIMS2-209ENST00000410038 GCP02774 474 aa19.62■□□□□ 0.73
LIMS2-209ENST00000410038 NUTM2AQ8IVF1 878 aaPredicted RBP19.62■□□□□ 0.73
LIMS2-209ENST00000410038 HAP1P54257 671 aaPredicted RBP19.61■□□□□ 0.73
LIMS2-209ENST00000410038 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
LIMS2-209ENST00000410038 NFAT5O94916 1531 aa19.6■□□□□ 0.73
LIMS2-209ENST00000410038 SOX12O15370 315 aa19.59■□□□□ 0.73
LIMS2-209ENST00000410038 CNGB1Q14028 1251 aaPredicted RBP19.59■□□□□ 0.73
LIMS2-209ENST00000410038 KCNH5Q8NCM2 988 aa19.59■□□□□ 0.73
LIMS2-209ENST00000410038 MAP2P11137 1827 aaKnown RBP19.59■□□□□ 0.73
LIMS2-209ENST00000410038 LTN1O94822 1766 aa19.59■□□□□ 0.73
LIMS2-209ENST00000410038 CDK12Q9NYV4 1490 aaPredicted RBP19.58■□□□□ 0.73
LIMS2-209ENST00000410038 ADAMTS2O95450 1211 aa19.57■□□□□ 0.72
LIMS2-209ENST00000410038 ZC3H6P61129 1189 aaKnown RBP19.57■□□□□ 0.72
LIMS2-209ENST00000410038 MORC1Q86VD1 984 aa19.57■□□□□ 0.72
LIMS2-209ENST00000410038 FBLN1P23142 703 aa19.56■□□□□ 0.72
LIMS2-209ENST00000410038 RXRBP28702 533 aa19.56■□□□□ 0.72
LIMS2-209ENST00000410038 TNNT2P45379 298 aaPredicted RBP19.55■□□□□ 0.72
LIMS2-209ENST00000410038 CPDO75976 1380 aa19.54■□□□□ 0.72
LIMS2-209ENST00000410038 KIAA0232Q92628 1395 aa19.54■□□□□ 0.72
LIMS2-209ENST00000410038 ARHGEF25Q86VW2 580 aa19.53■□□□□ 0.72
LIMS2-209ENST00000410038 COL18A1P39060 1754 aa19.53■□□□□ 0.72
LIMS2-209ENST00000410038 AATKQ6ZMQ8 1374 aa19.52■□□□□ 0.72
LIMS2-209ENST00000410038 AFF2P51816 1311 aa19.52■□□□□ 0.72
LIMS2-209ENST00000410038 COL14A1Q05707 1796 aaKnown RBP19.52■□□□□ 0.72
LIMS2-209ENST00000410038 RGPD5Q99666 1765 aa19.52■□□□□ 0.72
LIMS2-209ENST00000410038 RRS1Q15050 365 aaKnown RBP19.52■□□□□ 0.71
LIMS2-209ENST00000410038 PRDM11Q9NQV5 511 aa19.52■□□□□ 0.71
LIMS2-209ENST00000410038 ZBTB7CA1YPR0 619 aa19.51■□□□□ 0.71
LIMS2-209ENST00000410038 FAM83GA6ND36 823 aa19.51■□□□□ 0.71
LIMS2-209ENST00000410038 PARD3Q8TEW0 1356 aa19.51■□□□□ 0.71
LIMS2-209ENST00000410038 PLCH1Q4KWH8 1693 aa19.51■□□□□ 0.71
LIMS2-209ENST00000410038 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
LIMS2-209ENST00000410038 LMO7Q8WWI1 1683 aa19.5■□□□□ 0.71
LIMS2-209ENST00000410038 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
LIMS2-209ENST00000410038 PEAK1Q9H792 1746 aa19.5■□□□□ 0.71
LIMS2-209ENST00000410038 C8orf37Q96NL8 207 aa19.49■□□□□ 0.71
LIMS2-209ENST00000410038 POLKQ9UBT6 870 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms