RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 PAK3O75914 559 aaPredicted RBP25.87■■□□□ 1.73
LIMS2-207ENST00000409808 RBM33Q96EV2 1170 aaKnown RBP25.86■■□□□ 1.73
LIMS2-207ENST00000409808 CHD2O14647 1828 aaKnown RBP25.85■■□□□ 1.73
LIMS2-207ENST00000409808 PIK3R4Q99570 1358 aa25.85■■□□□ 1.73
LIMS2-207ENST00000409808 KIF20BQ96Q89 1820 aa25.85■■□□□ 1.73
LIMS2-207ENST00000409808 NPHP4O75161 1426 aaPredicted RBP25.84■■□□□ 1.73
LIMS2-207ENST00000409808 CDC42BPGQ6DT37 1551 aa25.84■■□□□ 1.73
LIMS2-207ENST00000409808 POLR3AO14802 1390 aaPredicted RBP25.84■■□□□ 1.73
LIMS2-207ENST00000409808 ANKRD26Q9UPS8 1709 aa25.84■■□□□ 1.73
LIMS2-207ENST00000409808 PDE4AP27815 886 aa25.83■■□□□ 1.73
LIMS2-207ENST00000409808 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
LIMS2-207ENST00000409808 BACH2Q9BYV9 841 aa25.82■■□□□ 1.72
LIMS2-207ENST00000409808 ZRANB1Q9UGI0 708 aa25.81■■□□□ 1.72
LIMS2-207ENST00000409808 RGPD8O14715 1765 aaPredicted RBP25.81■■□□□ 1.72
LIMS2-207ENST00000409808 ITSN1Q15811 1721 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 NME9Q86XW9 330 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 AKAP12Q02952 1782 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 TOPAZ1Q8N9V7 1692 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 FBLN1P23142 703 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 MON2Q7Z3U7 1717 aa25.79■■□□□ 1.72
LIMS2-207ENST00000409808 EDC4Q6P2E9 1401 aaKnown RBP25.79■■□□□ 1.72
LIMS2-207ENST00000409808 CRBNQ96SW2 442 aa25.79■■□□□ 1.72
LIMS2-207ENST00000409808 SHPRHQ149N8 1683 aa25.78■■□□□ 1.72
LIMS2-207ENST00000409808 ACEP12821 1306 aa25.78■■□□□ 1.72
LIMS2-207ENST00000409808 ZNF521Q96K83 1311 aa25.78■■□□□ 1.72
LIMS2-207ENST00000409808 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
LIMS2-207ENST00000409808 KDM4FA0A1W2PPD8 638 aa25.77■■□□□ 1.72
LIMS2-207ENST00000409808 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
LIMS2-207ENST00000409808 PLIN1O60240 522 aa25.76■■□□□ 1.71
LIMS2-207ENST00000409808 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
LIMS2-207ENST00000409808 DUSP27Q5VZP5 1158 aa25.75■■□□□ 1.71
LIMS2-207ENST00000409808 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.75■■□□□ 1.71
LIMS2-207ENST00000409808 PLEKHG3A1L390 1219 aa25.75■■□□□ 1.71
LIMS2-207ENST00000409808 ZNF692Q9BU19 519 aaPredicted RBP25.74■■□□□ 1.71
LIMS2-207ENST00000409808 DEKP35659 375 aaKnown RBP25.74■■□□□ 1.71
LIMS2-207ENST00000409808 HSPA2P54652 639 aa25.74■■□□□ 1.71
LIMS2-207ENST00000409808 NGEFQ8N5V2 710 aa25.74■■□□□ 1.71
LIMS2-207ENST00000409808 CFAP53Q96M91 514 aa25.74■■□□□ 1.71
LIMS2-207ENST00000409808 NALCNQ8IZF0 1738 aa25.73■■□□□ 1.71
LIMS2-207ENST00000409808 APAF1O14727 1248 aa25.69■■□□□ 1.7
LIMS2-207ENST00000409808 TTC21BQ7Z4L5 1316 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 FMN2Q9NZ56 1722 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 SLFN5Q08AF3 891 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 NBR1Q14596 966 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 CENPQQ7L2Z9 268 aaPredicted RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 PPM1GO15355 546 aaPredicted RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 RTL5Q5HYW3 569 aaPredicted RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 TRMT2AQ8IZ69 625 aaKnown RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 MAP2P11137 1827 aaKnown RBP25.67■■□□□ 1.7
LIMS2-207ENST00000409808 NRKQ7Z2Y5 1582 aa25.67■■□□□ 1.7
LIMS2-207ENST00000409808 USP6P35125 1406 aa25.67■■□□□ 1.7
LIMS2-207ENST00000409808 KDM2BQ8NHM5 1336 aa25.67■■□□□ 1.7
LIMS2-207ENST00000409808 NGDNQ8NEJ9 315 aaKnown RBP25.66■■□□□ 1.7
LIMS2-207ENST00000409808 COG3Q96JB2 828 aa25.66■■□□□ 1.7
LIMS2-207ENST00000409808 POLKQ9UBT6 870 aa25.66■■□□□ 1.7
LIMS2-207ENST00000409808 COL3A1P02461 1466 aaPredicted RBP25.65■■□□□ 1.7
LIMS2-207ENST00000409808 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.69
LIMS2-207ENST00000409808 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.69
LIMS2-207ENST00000409808 C14orf37Q86TY3 774 aa25.64■■□□□ 1.69
LIMS2-207ENST00000409808 DDRGK1Q96HY6 314 aa25.64■■□□□ 1.69
LIMS2-207ENST00000409808 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
LIMS2-207ENST00000409808 EMILIN1Q9Y6C2 1016 aa25.63■■□□□ 1.69
LIMS2-207ENST00000409808 ANKARQ7Z5J8 1434 aa25.62■■□□□ 1.69
LIMS2-207ENST00000409808 U2SURPO15042 1029 aaKnown RBP25.62■■□□□ 1.69
LIMS2-207ENST00000409808 C20orf194Q5TEA3 1177 aa25.62■■□□□ 1.69
LIMS2-207ENST00000409808 ADGRL3Q9HAR2 1447 aa25.61■■□□□ 1.69
LIMS2-207ENST00000409808 RRS1Q15050 365 aaKnown RBP25.61■■□□□ 1.69
LIMS2-207ENST00000409808 SSH2Q76I76 1423 aa25.6■■□□□ 1.69
LIMS2-207ENST00000409808 PROSER2Q86WR7 435 aaPredicted RBP25.6■■□□□ 1.69
LIMS2-207ENST00000409808 NWD1Q149M9 1564 aa25.6■■□□□ 1.69
LIMS2-207ENST00000409808 USP35Q9P2H5 1018 aa25.59■■□□□ 1.69
LIMS2-207ENST00000409808 PNPLA6Q8IY17 1366 aa25.59■■□□□ 1.69
LIMS2-207ENST00000409808 E9PSI1 815 aa25.58■■□□□ 1.69
LIMS2-207ENST00000409808 RUNDC1Q96C34 613 aa25.58■■□□□ 1.69
LIMS2-207ENST00000409808 RRP7AQ9Y3A4 280 aaKnown RBP25.58■■□□□ 1.69
LIMS2-207ENST00000409808 DIAPH1O60610 1272 aaKnown RBP25.58■■□□□ 1.68
LIMS2-207ENST00000409808 NEUROD2Q15784 382 aa25.57■■□□□ 1.68
LIMS2-207ENST00000409808 SOX12O15370 315 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 TCP11L2Q8N4U5 519 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 OVOS2A0A0J9YW53 1432 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 OVOS2Q6IE36 1432 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 LMTK3Q96Q04 1460 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 STRCP1A6NGW2 1772 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 PHF8Q9UPP1 1060 aa25.54■■□□□ 1.68
LIMS2-207ENST00000409808 AATKQ6ZMQ8 1374 aa25.54■■□□□ 1.68
LIMS2-207ENST00000409808 ESCO1Q5FWF5 840 aa25.53■■□□□ 1.68
LIMS2-207ENST00000409808 DMRT2Q9Y5R5 561 aa25.53■■□□□ 1.68
LIMS2-207ENST00000409808 SPINK5Q9NQ38 1064 aaPredicted RBP25.52■■□□□ 1.68
LIMS2-207ENST00000409808 TTC21AQ8NDW8 1320 aa25.52■■□□□ 1.68
LIMS2-207ENST00000409808 NUTM2GQ5VZR2 741 aa25.52■■□□□ 1.68
LIMS2-207ENST00000409808 IQSEC2Q5JU85 1478 aa25.51■■□□□ 1.67
LIMS2-207ENST00000409808 PIK3C2AO00443 1686 aa25.5■■□□□ 1.67
LIMS2-207ENST00000409808 FAM161AQ3B820 660 aa25.49■■□□□ 1.67
LIMS2-207ENST00000409808 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
LIMS2-207ENST00000409808 PLEKHF1Q96S99 279 aa25.49■■□□□ 1.67
LIMS2-207ENST00000409808 WWC1Q8IX03 1113 aa25.48■■□□□ 1.67
LIMS2-207ENST00000409808 CDK12Q9NYV4 1490 aaPredicted RBP25.48■■□□□ 1.67
LIMS2-207ENST00000409808 STRCQ7RTU9 1775 aa25.48■■□□□ 1.67
LIMS2-207ENST00000409808 IL13P35225 146 aa25.46■■□□□ 1.67
LIMS2-207ENST00000409808 NLRP6P59044 892 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms