RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 PAK3O75914 559 aaPredicted RBP25.87■■□□□ 1.73
LIMS2-207ENST00000409808 RBM33Q96EV2 1170 aaKnown RBP25.86■■□□□ 1.73
LIMS2-207ENST00000409808 CHD2O14647 1828 aaKnown RBP25.85■■□□□ 1.73
LIMS2-207ENST00000409808 PIK3R4Q99570 1358 aa25.85■■□□□ 1.73
LIMS2-207ENST00000409808 KIF20BQ96Q89 1820 aa25.85■■□□□ 1.73
LIMS2-207ENST00000409808 NPHP4O75161 1426 aaPredicted RBP25.84■■□□□ 1.73
LIMS2-207ENST00000409808 CDC42BPGQ6DT37 1551 aa25.84■■□□□ 1.73
LIMS2-207ENST00000409808 POLR3AO14802 1390 aaPredicted RBP25.84■■□□□ 1.73
LIMS2-207ENST00000409808 ANKRD26Q9UPS8 1709 aa25.84■■□□□ 1.73
LIMS2-207ENST00000409808 PDE4AP27815 886 aa25.83■■□□□ 1.73
LIMS2-207ENST00000409808 CCDC146Q8IYE0 955 aa25.82■■□□□ 1.72
LIMS2-207ENST00000409808 BACH2Q9BYV9 841 aa25.82■■□□□ 1.72
LIMS2-207ENST00000409808 ZRANB1Q9UGI0 708 aa25.81■■□□□ 1.72
LIMS2-207ENST00000409808 RGPD8O14715 1765 aaPredicted RBP25.81■■□□□ 1.72
LIMS2-207ENST00000409808 ITSN1Q15811 1721 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 NME9Q86XW9 330 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 AKAP12Q02952 1782 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 TOPAZ1Q8N9V7 1692 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 FBLN1P23142 703 aa25.8■■□□□ 1.72
LIMS2-207ENST00000409808 MON2Q7Z3U7 1717 aa25.79■■□□□ 1.72
LIMS2-207ENST00000409808 EDC4Q6P2E9 1401 aaKnown RBP25.79■■□□□ 1.72
LIMS2-207ENST00000409808 CRBNQ96SW2 442 aa25.79■■□□□ 1.72
LIMS2-207ENST00000409808 SHPRHQ149N8 1683 aa25.78■■□□□ 1.72
LIMS2-207ENST00000409808 ACEP12821 1306 aa25.78■■□□□ 1.72
LIMS2-207ENST00000409808 ZNF521Q96K83 1311 aa25.78■■□□□ 1.72
LIMS2-207ENST00000409808 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
LIMS2-207ENST00000409808 KDM4FA0A1W2PPD8 638 aa25.77■■□□□ 1.72
LIMS2-207ENST00000409808 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
LIMS2-207ENST00000409808 PLIN1O60240 522 aa25.76■■□□□ 1.71
LIMS2-207ENST00000409808 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
LIMS2-207ENST00000409808 DUSP27Q5VZP5 1158 aa25.75■■□□□ 1.71
LIMS2-207ENST00000409808 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.75■■□□□ 1.71
LIMS2-207ENST00000409808 PLEKHG3A1L390 1219 aa25.75■■□□□ 1.71
LIMS2-207ENST00000409808 ZNF692Q9BU19 519 aaPredicted RBP25.74■■□□□ 1.71
LIMS2-207ENST00000409808 DEKP35659 375 aaKnown RBP25.74■■□□□ 1.71
LIMS2-207ENST00000409808 HSPA2P54652 639 aa25.74■■□□□ 1.71
LIMS2-207ENST00000409808 NGEFQ8N5V2 710 aa25.74■■□□□ 1.71
LIMS2-207ENST00000409808 CFAP53Q96M91 514 aa25.74■■□□□ 1.71
LIMS2-207ENST00000409808 NALCNQ8IZF0 1738 aa25.73■■□□□ 1.71
LIMS2-207ENST00000409808 APAF1O14727 1248 aa25.69■■□□□ 1.7
LIMS2-207ENST00000409808 TTC21BQ7Z4L5 1316 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 FMN2Q9NZ56 1722 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 SLFN5Q08AF3 891 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 NBR1Q14596 966 aa25.68■■□□□ 1.7
LIMS2-207ENST00000409808 CENPQQ7L2Z9 268 aaPredicted RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 PPM1GO15355 546 aaPredicted RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 RTL5Q5HYW3 569 aaPredicted RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 TRMT2AQ8IZ69 625 aaKnown RBP25.68■■□□□ 1.7
LIMS2-207ENST00000409808 MAP2P11137 1827 aaKnown RBP25.67■■□□□ 1.7
LIMS2-207ENST00000409808 NRKQ7Z2Y5 1582 aa25.67■■□□□ 1.7
LIMS2-207ENST00000409808 USP6P35125 1406 aa25.67■■□□□ 1.7
LIMS2-207ENST00000409808 KDM2BQ8NHM5 1336 aa25.67■■□□□ 1.7
LIMS2-207ENST00000409808 NGDNQ8NEJ9 315 aaKnown RBP25.66■■□□□ 1.7
LIMS2-207ENST00000409808 COG3Q96JB2 828 aa25.66■■□□□ 1.7
LIMS2-207ENST00000409808 POLKQ9UBT6 870 aa25.66■■□□□ 1.7
LIMS2-207ENST00000409808 COL3A1P02461 1466 aaPredicted RBP25.65■■□□□ 1.7
LIMS2-207ENST00000409808 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.69
LIMS2-207ENST00000409808 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.69
LIMS2-207ENST00000409808 C14orf37Q86TY3 774 aa25.64■■□□□ 1.69
LIMS2-207ENST00000409808 DDRGK1Q96HY6 314 aa25.64■■□□□ 1.69
LIMS2-207ENST00000409808 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
LIMS2-207ENST00000409808 EMILIN1Q9Y6C2 1016 aa25.63■■□□□ 1.69
LIMS2-207ENST00000409808 ANKARQ7Z5J8 1434 aa25.62■■□□□ 1.69
LIMS2-207ENST00000409808 U2SURPO15042 1029 aaKnown RBP25.62■■□□□ 1.69
LIMS2-207ENST00000409808 C20orf194Q5TEA3 1177 aa25.62■■□□□ 1.69
LIMS2-207ENST00000409808 ADGRL3Q9HAR2 1447 aa25.61■■□□□ 1.69
LIMS2-207ENST00000409808 RRS1Q15050 365 aaKnown RBP25.61■■□□□ 1.69
LIMS2-207ENST00000409808 SSH2Q76I76 1423 aa25.6■■□□□ 1.69
LIMS2-207ENST00000409808 PROSER2Q86WR7 435 aaPredicted RBP25.6■■□□□ 1.69
LIMS2-207ENST00000409808 NWD1Q149M9 1564 aa25.6■■□□□ 1.69
LIMS2-207ENST00000409808 USP35Q9P2H5 1018 aa25.59■■□□□ 1.69
LIMS2-207ENST00000409808 PNPLA6Q8IY17 1366 aa25.59■■□□□ 1.69
LIMS2-207ENST00000409808 E9PSI1 815 aa25.58■■□□□ 1.69
LIMS2-207ENST00000409808 RUNDC1Q96C34 613 aa25.58■■□□□ 1.69
LIMS2-207ENST00000409808 RRP7AQ9Y3A4 280 aaKnown RBP25.58■■□□□ 1.69
LIMS2-207ENST00000409808 DIAPH1O60610 1272 aaKnown RBP25.58■■□□□ 1.68
LIMS2-207ENST00000409808 NEUROD2Q15784 382 aa25.57■■□□□ 1.68
LIMS2-207ENST00000409808 SOX12O15370 315 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 TCP11L2Q8N4U5 519 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 OVOS2A0A0J9YW53 1432 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 OVOS2Q6IE36 1432 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 LMTK3Q96Q04 1460 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 STRCP1A6NGW2 1772 aa25.55■■□□□ 1.68
LIMS2-207ENST00000409808 PHF8Q9UPP1 1060 aa25.54■■□□□ 1.68
LIMS2-207ENST00000409808 AATKQ6ZMQ8 1374 aa25.54■■□□□ 1.68
LIMS2-207ENST00000409808 ESCO1Q5FWF5 840 aa25.53■■□□□ 1.68
LIMS2-207ENST00000409808 DMRT2Q9Y5R5 561 aa25.53■■□□□ 1.68
LIMS2-207ENST00000409808 SPINK5Q9NQ38 1064 aaPredicted RBP25.52■■□□□ 1.68
LIMS2-207ENST00000409808 TTC21AQ8NDW8 1320 aa25.52■■□□□ 1.68
LIMS2-207ENST00000409808 NUTM2GQ5VZR2 741 aa25.52■■□□□ 1.68
LIMS2-207ENST00000409808 IQSEC2Q5JU85 1478 aa25.51■■□□□ 1.67
LIMS2-207ENST00000409808 PIK3C2AO00443 1686 aa25.5■■□□□ 1.67
LIMS2-207ENST00000409808 FAM161AQ3B820 660 aa25.49■■□□□ 1.67
LIMS2-207ENST00000409808 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
LIMS2-207ENST00000409808 PLEKHF1Q96S99 279 aa25.49■■□□□ 1.67
LIMS2-207ENST00000409808 WWC1Q8IX03 1113 aa25.48■■□□□ 1.67
LIMS2-207ENST00000409808 CDK12Q9NYV4 1490 aaPredicted RBP25.48■■□□□ 1.67
LIMS2-207ENST00000409808 STRCQ7RTU9 1775 aa25.48■■□□□ 1.67
LIMS2-207ENST00000409808 IL13P35225 146 aa25.46■■□□□ 1.67
LIMS2-207ENST00000409808 NLRP6P59044 892 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms