RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 SRPK2P78362 688 aaKnown RBP19.35■□□□□ 0.69
LYSMD4-204ENST00000409796 DZIP1LQ8IYY4 767 aaKnown RBP19.35■□□□□ 0.69
LYSMD4-204ENST00000409796 COL3A1P02461 1466 aaPredicted RBP19.34■□□□□ 0.69
LYSMD4-204ENST00000409796 BECN1Q14457 450 aa19.34■□□□□ 0.69
LYSMD4-204ENST00000409796 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
LYSMD4-204ENST00000409796 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.69
LYSMD4-204ENST00000409796 FTSJ3Q8IY81 847 aaKnown RBP19.33■□□□□ 0.69
LYSMD4-204ENST00000409796 ARHGAP31Q2M1Z3 1444 aa19.33■□□□□ 0.69
LYSMD4-204ENST00000409796 TRIM35Q9UPQ4 493 aa19.33■□□□□ 0.68
LYSMD4-204ENST00000409796 ANKRD26Q9UPS8 1709 aa19.32■□□□□ 0.68
LYSMD4-204ENST00000409796 ZFYVE9O95405 1425 aa19.32■□□□□ 0.68
LYSMD4-204ENST00000409796 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
LYSMD4-204ENST00000409796 SMC4Q9NTJ3 1288 aa19.32■□□□□ 0.68
LYSMD4-204ENST00000409796 NEO1Q92859 1461 aa19.31■□□□□ 0.68
LYSMD4-204ENST00000409796 TBC1D32Q96NH3 1257 aa19.31■□□□□ 0.68
LYSMD4-204ENST00000409796 PTPRMP28827 1452 aa19.31■□□□□ 0.68
LYSMD4-204ENST00000409796 MINK1Q8N4C8 1332 aaPredicted RBP19.3■□□□□ 0.68
LYSMD4-204ENST00000409796 UPF2Q9HAU5 1272 aaKnown RBP19.3■□□□□ 0.68
LYSMD4-204ENST00000409796 FYB1O15117 783 aa19.3■□□□□ 0.68
LYSMD4-204ENST00000409796 SLKQ9H2G2 1235 aaPredicted RBP19.3■□□□□ 0.68
LYSMD4-204ENST00000409796 TSPOAP1O95153 1857 aa19.29■□□□□ 0.68
LYSMD4-204ENST00000409796 SSH1Q8WYL5 1049 aa19.29■□□□□ 0.68
LYSMD4-204ENST00000409796 CD163L1Q9NR16 1453 aa19.29■□□□□ 0.68
LYSMD4-204ENST00000409796 TRIM27P14373 513 aa19.29■□□□□ 0.68
LYSMD4-204ENST00000409796 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
LYSMD4-204ENST00000409796 ATAD2Q6PL18 1390 aa19.28■□□□□ 0.68
LYSMD4-204ENST00000409796 TMEM131LA2VDJ0 1609 aa19.28■□□□□ 0.68
LYSMD4-204ENST00000409796 CLTCQ00610 1675 aaKnown RBP19.28■□□□□ 0.68
LYSMD4-204ENST00000409796 PRAM1Q96QH2 718 aa19.28■□□□□ 0.68
LYSMD4-204ENST00000409796 RICTORQ6R327 1708 aa19.27■□□□□ 0.68
LYSMD4-204ENST00000409796 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.68
LYSMD4-204ENST00000409796 TERF2IPQ9NYB0 399 aa19.27■□□□□ 0.68
LYSMD4-204ENST00000409796 MED14O60244 1454 aa19.26■□□□□ 0.67
LYSMD4-204ENST00000409796 EIF5BO60841 1220 aaKnown RBP19.26■□□□□ 0.67
LYSMD4-204ENST00000409796 ITPRIPQ8IWB1 547 aa19.26■□□□□ 0.67
LYSMD4-204ENST00000409796 POGKQ9P215 609 aa19.26■□□□□ 0.67
LYSMD4-204ENST00000409796 IL16Q14005 1332 aa19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 RIPK4P57078 832 aa19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 TBC1D2Q9BYX2 928 aa19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 ANTXR1Q9H6X2 564 aa19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 NOB1Q9ULX3 412 aaKnown RBP19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 DDX19BQ9UMR2 479 aa19.25■□□□□ 0.67
LYSMD4-204ENST00000409796 HDAC1Q13547 482 aaPredicted RBP19.24■□□□□ 0.67
LYSMD4-204ENST00000409796 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
LYSMD4-204ENST00000409796 KIF20BQ96Q89 1820 aa19.23■□□□□ 0.67
LYSMD4-204ENST00000409796 TMEM57Q8N5G2 664 aa19.22■□□□□ 0.67
LYSMD4-204ENST00000409796 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
LYSMD4-204ENST00000409796 PNPLA6Q8IY17 1366 aa19.21■□□□□ 0.67
LYSMD4-204ENST00000409796 CDK19Q9BWU1 502 aa19.2■□□□□ 0.66
LYSMD4-204ENST00000409796 ALKQ9UM73 1620 aa19.2■□□□□ 0.66
LYSMD4-204ENST00000409796 CABP1Q9NZU7 370 aa19.19■□□□□ 0.66
LYSMD4-204ENST00000409796 SMC5Q8IY18 1101 aa19.19■□□□□ 0.66
LYSMD4-204ENST00000409796 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 ARHGEF40Q8TER5 1519 aa19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 LRRC7Q96NW7 1537 aa19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 MFAP1P55081 439 aaKnown RBP19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 FBXO31Q5XUX0 539 aaPredicted RBP19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 PNNQ9H307 717 aaKnown RBP19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 KIF16BQ96L93 1317 aa19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 KDM4FA0A1W2PPD8 638 aa19.18■□□□□ 0.66
LYSMD4-204ENST00000409796 CDC42BPGQ6DT37 1551 aa19.16■□□□□ 0.66
LYSMD4-204ENST00000409796 IPO8O15397 1037 aaKnown RBP19.16■□□□□ 0.66
LYSMD4-204ENST00000409796 FBLN1P23142 703 aa19.16■□□□□ 0.66
LYSMD4-204ENST00000409796 SPRYD3Q8NCJ5 442 aa19.16■□□□□ 0.66
LYSMD4-204ENST00000409796 FCHSD2O94868 740 aa19.16■□□□□ 0.66
LYSMD4-204ENST00000409796 PRKAR2BP31323 418 aa19.15■□□□□ 0.66
LYSMD4-204ENST00000409796 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
LYSMD4-204ENST00000409796 RSPH6AQ9H0K4 717 aa19.15■□□□□ 0.66
LYSMD4-204ENST00000409796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.14■□□□□ 0.65
LYSMD4-204ENST00000409796 FAM135BQ49AJ0 1406 aa19.14■□□□□ 0.65
LYSMD4-204ENST00000409796 MAP2P11137 1827 aaKnown RBP19.14■□□□□ 0.65
LYSMD4-204ENST00000409796 POLKQ9UBT6 870 aa19.13■□□□□ 0.65
LYSMD4-204ENST00000409796 NUCB1Q02818 461 aa19.11■□□□□ 0.65
LYSMD4-204ENST00000409796 STAG3Q9UJ98 1225 aa19.11■□□□□ 0.65
LYSMD4-204ENST00000409796 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
LYSMD4-204ENST00000409796 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
LYSMD4-204ENST00000409796 LNPKQ9C0E8 428 aa19.1■□□□□ 0.65
LYSMD4-204ENST00000409796 HMOX1P09601 288 aa19.09■□□□□ 0.65
LYSMD4-204ENST00000409796 FAM43AQ8N2R8 423 aa19.09■□□□□ 0.65
LYSMD4-204ENST00000409796 THUMPD2Q9BTF0 503 aaKnown RBP19.09■□□□□ 0.65
LYSMD4-204ENST00000409796 NFE2L2Q16236 605 aa19.08■□□□□ 0.65
LYSMD4-204ENST00000409796 PPIP5K1Q6PFW1 1433 aa19.08■□□□□ 0.65
LYSMD4-204ENST00000409796 ATP7BP35670 1465 aa19.08■□□□□ 0.65
LYSMD4-204ENST00000409796 BRPF1P55201 1214 aaPredicted RBP19.08■□□□□ 0.64
LYSMD4-204ENST00000409796 CHD1LQ86WJ1 897 aa19.07■□□□□ 0.64
LYSMD4-204ENST00000409796 DLC1Q96QB1 1528 aa19.07■□□□□ 0.64
LYSMD4-204ENST00000409796 VAMP4O75379 141 aa19.07■□□□□ 0.64
LYSMD4-204ENST00000409796 MCM4P33991 863 aa19.07■□□□□ 0.64
LYSMD4-204ENST00000409796 MRPL50Q8N5N7 158 aaKnown RBP19.07■□□□□ 0.64
LYSMD4-204ENST00000409796 ZNF428Q96B54 188 aa19.07■□□□□ 0.64
LYSMD4-204ENST00000409796 CHMP5Q9NZZ3 219 aa19.07■□□□□ 0.64
LYSMD4-204ENST00000409796 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
LYSMD4-204ENST00000409796 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
LYSMD4-204ENST00000409796 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
LYSMD4-204ENST00000409796 ZBTB7BO15156 539 aaPredicted RBP19.05■□□□□ 0.64
LYSMD4-204ENST00000409796 HSCBQ8IWL3 235 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms