RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 NEFMP07197 916 aa4.12□□□□□ -1.75
CUL3-204ENST00000409777 NFKBIBQ15653 356 aa4.12□□□□□ -1.75
CUL3-204ENST00000409777 FAM161AQ3B820 660 aa4.12□□□□□ -1.75
CUL3-204ENST00000409777 KIF1BO60333 1816 aa4.12□□□□□ -1.75
CUL3-204ENST00000409777 SLFN5Q08AF3 891 aa4.11□□□□□ -1.75
CUL3-204ENST00000409777 MS4A3Q96HJ5 214 aa4.11□□□□□ -1.75
CUL3-204ENST00000409777 TSPYL2Q9H2G4 693 aaPredicted RBP4.11□□□□□ -1.75
CUL3-204ENST00000409777 ANO8Q9HCE9 1232 aaPredicted RBP4.11□□□□□ -1.75
CUL3-204ENST00000409777 SALL2Q9Y467 1007 aaPredicted RBP4.11□□□□□ -1.75
CUL3-204ENST00000409777 SCUBE2Q9NQ36 999 aa4.11□□□□□ -1.75
CUL3-204ENST00000409777 METRNQ9UJH8 293 aa4.11□□□□□ -1.75
CUL3-204ENST00000409777 PIK3C2BO00750 1634 aa4.11□□□□□ -1.75
CUL3-204ENST00000409777 ADGRB3O60242 1522 aa4.11□□□□□ -1.75
CUL3-204ENST00000409777 AAMPQ13685 434 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 C20orf194Q5TEA3 1177 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 MFRPQ9BY79 579 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 RSPH6AQ9H0K4 717 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 ARHGAP5Q13017 1502 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 EFCAB6Q5THR3 1501 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 PLCH2O75038 1416 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 QRICH2Q9H0J4 1663 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 POLR3AO14802 1390 aaPredicted RBP4.1□□□□□ -1.75
CUL3-204ENST00000409777 SOX12O15370 315 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 PPP2R1AP30153 589 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 PSEN1P49768 467 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 NBPF1Q3BBV0 1214 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 FAM43AQ8N2R8 423 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 DCAF11Q8TEB1 546 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 UBE2Q2Q8WVN8 375 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 ANTXR1Q9H6X2 564 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 ARHGAP31Q2M1Z3 1444 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 NCOA3Q9Y6Q9 1424 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 CLTCQ00610 1675 aaKnown RBP4.1□□□□□ -1.75
CUL3-204ENST00000409777 ADGRB1O14514 1584 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 FANCAO15360 1455 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 FBXO22Q8NEZ5 403 aa4.1□□□□□ -1.75
CUL3-204ENST00000409777 ZNF518AQ6AHZ1 1483 aa4.09□□□□□ -1.75
CUL3-204ENST00000409777 CDC42BPGQ6DT37 1551 aa4.09□□□□□ -1.75
CUL3-204ENST00000409777 PANK3Q9H999 370 aa4.09□□□□□ -1.75
CUL3-204ENST00000409777 REREQ9P2R6 1566 aa4.09□□□□□ -1.75
CUL3-204ENST00000409777 ARHGEF28Q8N1W1 1705 aaKnown RBP4.09□□□□□ -1.75
CUL3-204ENST00000409777 SEMA3EO15041 775 aa4.09□□□□□ -1.75
CUL3-204ENST00000409777 FRAT1Q92837 279 aaPredicted RBP4.09□□□□□ -1.75
CUL3-204ENST00000409777 JPH4Q96JJ6 628 aa4.09□□□□□ -1.75
CUL3-204ENST00000409777 ADAMTS8Q9UP79 889 aa4.09□□□□□ -1.75
CUL3-204ENST00000409777 PLEKHD1A6NEE1 506 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 TMF1P82094 1093 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 PDE3AQ14432 1141 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 BMP2KQ9NSY1 1161 aaPredicted RBP4.08□□□□□ -1.76
CUL3-204ENST00000409777 PCDHB8Q9UN66 801 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 LAS1LQ9Y4W2 734 aaKnown RBP4.08□□□□□ -1.76
CUL3-204ENST00000409777 PCDHB13Q9Y5F0 798 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 ATP7AQ04656 1500 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 FSD2A1L4K1 749 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 POTEB2H3BUK9 544 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 APBB1O00213 710 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 PLIN1O60240 522 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 TSPY4P0CV99 314 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 TSPY10P0CW01 314 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 GOLGA2Q08379 1002 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 MKRN3Q13064 507 aaKnown RBP4.08□□□□□ -1.76
CUL3-204ENST00000409777 BRPF3Q9ULD4 1205 aa4.08□□□□□ -1.76
CUL3-204ENST00000409777 ARIH1Q9Y4X5 557 aaPredicted RBP4.08□□□□□ -1.76
CUL3-204ENST00000409777 COL3A1P02461 1466 aaPredicted RBP4.07□□□□□ -1.76
CUL3-204ENST00000409777 NLRP6P59044 892 aa4.07□□□□□ -1.76
CUL3-204ENST00000409777 MAPK8IP3Q9UPT6 1336 aa4.07□□□□□ -1.76
CUL3-204ENST00000409777 KIDINS220Q9ULH0 1771 aa4.07□□□□□ -1.76
CUL3-204ENST00000409777 CFAP74Q9C0B2 1584 aa4.07□□□□□ -1.76
CUL3-204ENST00000409777 DDIT3P35638 169 aa4.07□□□□□ -1.76
CUL3-204ENST00000409777 HNRNPMP52272 730 aaKnown RBP eCLIP4.07□□□□□ -1.765e-8■■■■□ 24.3
CUL3-204ENST00000409777 ATN1P54259 1190 aaPredicted RBP4.07□□□□□ -1.76
CUL3-204ENST00000409777 CGNL1Q0VF96 1302 aa4.07□□□□□ -1.76
CUL3-204ENST00000409777 CCDC27Q2M243 656 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 SKAP1Q86WV1 359 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.06□□□□□ -1.76
CUL3-204ENST00000409777 ARHGEF1Q92888 912 aaKnown RBP4.06□□□□□ -1.76
CUL3-204ENST00000409777 CCDC9Q9Y3X0 531 aaKnown RBP4.06□□□□□ -1.76
CUL3-204ENST00000409777 MED14O60244 1454 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 E9PSI1 815 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 IGSF3O75054 1194 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 MFSD10Q14728 455 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 ZNF326Q5BKZ1 582 aaKnown RBP4.06□□□□□ -1.76
CUL3-204ENST00000409777 IFNL1Q8IU54 200 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 YEATS2Q9ULM3 1422 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 TRAPPC8Q9Y2L5 1435 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 FRMPD1Q5SYB0 1578 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 CAMSAP1Q5T5Y3 1602 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 KDM4FA0A1W2PPD8 638 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 FRAT2O75474 233 aaPredicted RBP4.06□□□□□ -1.76
CUL3-204ENST00000409777 IGHDP01880 384 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 CDCA8Q53HL2 280 aa4.06□□□□□ -1.76
CUL3-204ENST00000409777 TBC1D32Q96NH3 1257 aa4.05□□□□□ -1.76
CUL3-204ENST00000409777 PUS7Q96PZ0 661 aaKnown RBP4.05□□□□□ -1.76
CUL3-204ENST00000409777 WDR70Q9NW82 654 aa4.05□□□□□ -1.76
CUL3-204ENST00000409777 SIGLEC1Q9BZZ2 1709 aa4.05□□□□□ -1.76
CUL3-204ENST00000409777 ABCC3O15438 1527 aa4.05□□□□□ -1.76
CUL3-204ENST00000409777 TULP4Q9NRJ4 1543 aa4.05□□□□□ -1.76
CUL3-204ENST00000409777 KIF20BQ96Q89 1820 aa4.05□□□□□ -1.76
CUL3-204ENST00000409777 CC2D1BQ5T0F9 858 aaKnown RBP4.05□□□□□ -1.76
CUL3-204ENST00000409777 ZNF428Q96B54 188 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms