RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 MCM2P49736 904 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 TRDNQ13061 729 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 CCDC73Q6ZRK6 1079 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 GOLGA6L1Q8N7Z2 621 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 RPRD2Q5VT52 1461 aaKnown RBP19.03■□□□□ 0.64
SSFA2-202ENST00000409001 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 TRIM29Q14134 588 aa19.03■□□□□ 0.64
SSFA2-202ENST00000409001 THUMPD2Q9BTF0 503 aaKnown RBP19.03■□□□□ 0.64
SSFA2-202ENST00000409001 KIAA0586Q9BVV6 1533 aa19.02■□□□□ 0.64
SSFA2-202ENST00000409001 FIBPO43427 364 aa19.02■□□□□ 0.64
SSFA2-202ENST00000409001 FSD1Q9BTV5 496 aa19.02■□□□□ 0.64
SSFA2-202ENST00000409001 GRPEL1Q9HAV7 217 aa19.02■□□□□ 0.64
SSFA2-202ENST00000409001 DUSP27Q5VZP5 1158 aa19.02■□□□□ 0.64
SSFA2-202ENST00000409001 NOC3LQ8WTT2 800 aaKnown RBP19.02■□□□□ 0.64
SSFA2-202ENST00000409001 CCDC39Q9UFE4 941 aa19.02■□□□□ 0.64
SSFA2-202ENST00000409001 HOMER1Q86YM7 354 aa19.01■□□□□ 0.63
SSFA2-202ENST00000409001 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
SSFA2-202ENST00000409001 SSH1Q8WYL5 1049 aa19.01■□□□□ 0.63
SSFA2-202ENST00000409001 ABTB2Q8N961 1025 aa19.01■□□□□ 0.63
SSFA2-202ENST00000409001 NLRP2Q9NX02 1062 aa19.01■□□□□ 0.63
SSFA2-202ENST00000409001 EVA1CP58658 441 aa19■□□□□ 0.63
SSFA2-202ENST00000409001 HDGFL1Q5TGJ6 251 aa19■□□□□ 0.63
SSFA2-202ENST00000409001 BCL11BQ9C0K0 894 aaPredicted RBP19■□□□□ 0.63
SSFA2-202ENST00000409001 SLC52A1Q9NWF4 448 aa19■□□□□ 0.63
SSFA2-202ENST00000409001 FCHSD2O94868 740 aa19■□□□□ 0.63
SSFA2-202ENST00000409001 CAMSAP2Q08AD1 1489 aa19■□□□□ 0.63
SSFA2-202ENST00000409001 RAPGEF3O95398 923 aa18.99■□□□□ 0.63
SSFA2-202ENST00000409001 MPNDQ8N594 471 aa18.99■□□□□ 0.63
SSFA2-202ENST00000409001 CCDC173Q0VFZ6 552 aa18.99■□□□□ 0.63
SSFA2-202ENST00000409001 MAPKBP1O60336 1514 aa18.98■□□□□ 0.63
SSFA2-202ENST00000409001 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
SSFA2-202ENST00000409001 CC2D2AQ9P2K1 1620 aa18.98■□□□□ 0.63
SSFA2-202ENST00000409001 PSMA5P28066 241 aa18.98■□□□□ 0.63
SSFA2-202ENST00000409001 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
SSFA2-202ENST00000409001 CWC22Q9HCG8 908 aaKnown RBP18.98■□□□□ 0.63
SSFA2-202ENST00000409001 SDF4Q9BRK5 362 aa18.98■□□□□ 0.63
SSFA2-202ENST00000409001 MARCH6O60337 910 aa18.97■□□□□ 0.63
SSFA2-202ENST00000409001 WASHC4Q2M389 1173 aa18.97■□□□□ 0.63
SSFA2-202ENST00000409001 TSR1Q2NL82 804 aaKnown RBP18.97■□□□□ 0.63
SSFA2-202ENST00000409001 TSPY26PQ9H489 355 aa18.97■□□□□ 0.63
SSFA2-202ENST00000409001 CCT4P50991 539 aaKnown RBP18.97■□□□□ 0.63
SSFA2-202ENST00000409001 NFXL1Q6ZNB6 911 aa18.96■□□□□ 0.63
SSFA2-202ENST00000409001 ZNF428Q96B54 188 aa18.96■□□□□ 0.63
SSFA2-202ENST00000409001 TPM1P09493 284 aa18.96■□□□□ 0.63
SSFA2-202ENST00000409001 RALYLQ86SE5 291 aaKnown RBP18.96■□□□□ 0.63
SSFA2-202ENST00000409001 PTPRKQ15262 1439 aa18.96■□□□□ 0.63
SSFA2-202ENST00000409001 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
SSFA2-202ENST00000409001 CCDC141Q6ZP82 1450 aa18.96■□□□□ 0.63
SSFA2-202ENST00000409001 IQGAP2Q13576 1575 aa18.96■□□□□ 0.63
SSFA2-202ENST00000409001 ZNF771Q7L3S4 317 aaPredicted RBP18.95■□□□□ 0.62
SSFA2-202ENST00000409001 NKTRP30414 1462 aaKnown RBP18.95■□□□□ 0.62
SSFA2-202ENST00000409001 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
SSFA2-202ENST00000409001 SYTL4Q96C24 671 aaPredicted RBP18.95■□□□□ 0.62
SSFA2-202ENST00000409001 TRIM5Q9C035 493 aa18.95■□□□□ 0.62
SSFA2-202ENST00000409001 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
SSFA2-202ENST00000409001 MAP4K4O95819 1239 aaPredicted RBP18.95■□□□□ 0.62
SSFA2-202ENST00000409001 ZNF692Q9BU19 519 aaPredicted RBP18.95■□□□□ 0.62
SSFA2-202ENST00000409001 ATAD2Q6PL18 1390 aa18.94■□□□□ 0.62
SSFA2-202ENST00000409001 LRPPRCP42704 1394 aaKnown RBP18.94■□□□□ 0.62
SSFA2-202ENST00000409001 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
SSFA2-202ENST00000409001 PDCP20941 246 aa18.93■□□□□ 0.62
SSFA2-202ENST00000409001 DNAJC2Q99543 621 aaKnown RBP18.93■□□□□ 0.62
SSFA2-202ENST00000409001 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
SSFA2-202ENST00000409001 ESPNB1AK53 854 aa18.93■□□□□ 0.62
SSFA2-202ENST00000409001 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
SSFA2-202ENST00000409001 RTEL1-TNFRSF6BF6WH68 1400 aa18.92■□□□□ 0.62
SSFA2-202ENST00000409001 RPAP2Q8IXW5 612 aaPredicted RBP18.92■□□□□ 0.62
SSFA2-202ENST00000409001 TBC1D2Q9BYX2 928 aa18.92■□□□□ 0.62
SSFA2-202ENST00000409001 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
SSFA2-202ENST00000409001 ADGRF5Q8IZF2 1346 aa18.92■□□□□ 0.62
SSFA2-202ENST00000409001 A0A0U1RQG5 324 aaPredicted RBP18.92■□□□□ 0.62
SSFA2-202ENST00000409001 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
SSFA2-202ENST00000409001 EXOC6BQ9Y2D4 811 aa18.92■□□□□ 0.62
SSFA2-202ENST00000409001 PDE4CQ08493 712 aa18.91■□□□□ 0.62
SSFA2-202ENST00000409001 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
SSFA2-202ENST00000409001 RBM10P98175 930 aaKnown RBP18.91■□□□□ 0.62
SSFA2-202ENST00000409001 DISP3Q9P2K9 1392 aa18.91■□□□□ 0.62
SSFA2-202ENST00000409001 IGHDP01880 384 aa18.91■□□□□ 0.62
SSFA2-202ENST00000409001 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
SSFA2-202ENST00000409001 CEBPZQ03701 1054 aaKnown RBP18.9■□□□□ 0.62
SSFA2-202ENST00000409001 LETM1O95202 739 aaPredicted RBP18.9■□□□□ 0.62
SSFA2-202ENST00000409001 MIS18AQ9NYP9 233 aa18.9■□□□□ 0.62
SSFA2-202ENST00000409001 WDR33Q9C0J8 1336 aaKnown RBP18.9■□□□□ 0.62
SSFA2-202ENST00000409001 PLEKHO1Q53GL0 409 aaPredicted RBP18.9■□□□□ 0.62
SSFA2-202ENST00000409001 SPC24Q8NBT2 197 aa18.9■□□□□ 0.62
SSFA2-202ENST00000409001 G3V3G9 751 aa18.89■□□□□ 0.62
SSFA2-202ENST00000409001 SRGAP3O43295 1099 aa18.89■□□□□ 0.62
SSFA2-202ENST00000409001 DCAF8Q5TAQ9 597 aa18.89■□□□□ 0.62
SSFA2-202ENST00000409001 VPS53Q5VIR6 699 aa18.89■□□□□ 0.62
SSFA2-202ENST00000409001 FMNL2Q96PY5 1086 aa18.89■□□□□ 0.62
SSFA2-202ENST00000409001 CYP46A1Q9Y6A2 500 aa18.89■□□□□ 0.62
SSFA2-202ENST00000409001 TRIM27P14373 513 aa18.89■□□□□ 0.61
SSFA2-202ENST00000409001 SIL1Q9H173 461 aa18.89■□□□□ 0.61
SSFA2-202ENST00000409001 HOOK1Q9UJC3 728 aaKnown RBP18.89■□□□□ 0.61
SSFA2-202ENST00000409001 KDM4AO75164 1064 aa18.89■□□□□ 0.61
SSFA2-202ENST00000409001 SAFBQ15424 915 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSFA2-202ENST00000409001 TPM2P07951 284 aa18.88■□□□□ 0.61
SSFA2-202ENST00000409001 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms