RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 GSE1Q14687 1217 aa17.44■□□□□ 0.38
PMS2-204ENST00000406569 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
PMS2-204ENST00000406569 SETD1AO15047 1707 aaKnown RBP17.44■□□□□ 0.38
PMS2-204ENST00000406569 FYB1O15117 783 aa17.44■□□□□ 0.38
PMS2-204ENST00000406569 SEC24BO95487 1268 aa17.44■□□□□ 0.38
PMS2-204ENST00000406569 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
PMS2-204ENST00000406569 SRPK2P78362 688 aaKnown RBP17.41■□□□□ 0.38
PMS2-204ENST00000406569 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
PMS2-204ENST00000406569 AGLP35573 1532 aa17.41■□□□□ 0.38
PMS2-204ENST00000406569 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
PMS2-204ENST00000406569 TBC1D32Q96NH3 1257 aa17.41■□□□□ 0.38
PMS2-204ENST00000406569 GGNBP2Q9H3C7 697 aa17.41■□□□□ 0.38
PMS2-204ENST00000406569 ATP7BP35670 1465 aa17.4■□□□□ 0.38
PMS2-204ENST00000406569 BECN1Q14457 450 aa17.4■□□□□ 0.38
PMS2-204ENST00000406569 PRAM1Q96QH2 718 aa17.4■□□□□ 0.38
PMS2-204ENST00000406569 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
PMS2-204ENST00000406569 PPIP5K1Q6PFW1 1433 aa17.39■□□□□ 0.37
PMS2-204ENST00000406569 EXOSC9Q06265 439 aaKnown RBP17.39■□□□□ 0.37
PMS2-204ENST00000406569 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
PMS2-204ENST00000406569 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
PMS2-204ENST00000406569 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
PMS2-204ENST00000406569 STK26Q9P289 416 aa17.38■□□□□ 0.37
PMS2-204ENST00000406569 LRRC7Q96NW7 1537 aa17.38■□□□□ 0.37
PMS2-204ENST00000406569 SAFB2Q14151 953 aaKnown RBP eCLIP17.38■□□□□ 0.37
PMS2-204ENST00000406569 HDGFL2Q7Z4V5 671 aaPredicted RBP17.38■□□□□ 0.37
PMS2-204ENST00000406569 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
PMS2-204ENST00000406569 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
PMS2-204ENST00000406569 DDX19BQ9UMR2 479 aa17.38■□□□□ 0.37
PMS2-204ENST00000406569 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
PMS2-204ENST00000406569 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
PMS2-204ENST00000406569 TRIM27P14373 513 aa17.37■□□□□ 0.37
PMS2-204ENST00000406569 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
PMS2-204ENST00000406569 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
PMS2-204ENST00000406569 SMC4Q9NTJ3 1288 aa17.37■□□□□ 0.37
PMS2-204ENST00000406569 FAM135BQ49AJ0 1406 aa17.37■□□□□ 0.37
PMS2-204ENST00000406569 U2SURPO15042 1029 aaKnown RBP17.36■□□□□ 0.37
PMS2-204ENST00000406569 DIAPH1O60610 1272 aaKnown RBP17.36■□□□□ 0.37
PMS2-204ENST00000406569 FTSJ3Q8IY81 847 aaKnown RBP17.36■□□□□ 0.37
PMS2-204ENST00000406569 POGKQ9P215 609 aa17.36■□□□□ 0.37
PMS2-204ENST00000406569 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
PMS2-204ENST00000406569 MAP2P11137 1827 aaKnown RBP17.36■□□□□ 0.37
PMS2-204ENST00000406569 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
PMS2-204ENST00000406569 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
PMS2-204ENST00000406569 FCHSD2O94868 740 aa17.35■□□□□ 0.37
PMS2-204ENST00000406569 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
PMS2-204ENST00000406569 SMC5Q8IY18 1101 aa17.35■□□□□ 0.37
PMS2-204ENST00000406569 CDK19Q9BWU1 502 aa17.35■□□□□ 0.37
PMS2-204ENST00000406569 ANTXR1Q9H6X2 564 aa17.35■□□□□ 0.37
PMS2-204ENST00000406569 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
PMS2-204ENST00000406569 A2ML1A8K2U0 1454 aa17.34■□□□□ 0.37
PMS2-204ENST00000406569 ZNF428Q96B54 188 aa17.34■□□□□ 0.37
PMS2-204ENST00000406569 RIPK4P57078 832 aa17.33■□□□□ 0.37
PMS2-204ENST00000406569 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
PMS2-204ENST00000406569 KNDC1Q76NI1 1749 aa17.31■□□□□ 0.36
PMS2-204ENST00000406569 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
PMS2-204ENST00000406569 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
PMS2-204ENST00000406569 CPSF1Q10570 1443 aaKnown RBP17.31■□□□□ 0.36
PMS2-204ENST00000406569 NRXN3Q9Y4C0 1643 aa17.31■□□□□ 0.36
PMS2-204ENST00000406569 FBXO31Q5XUX0 539 aaPredicted RBP17.3■□□□□ 0.36
PMS2-204ENST00000406569 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
PMS2-204ENST00000406569 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
PMS2-204ENST00000406569 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
PMS2-204ENST00000406569 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
PMS2-204ENST00000406569 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
PMS2-204ENST00000406569 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
PMS2-204ENST00000406569 DIP2BQ9P265 1576 aa17.29■□□□□ 0.36
PMS2-204ENST00000406569 TBC1D2Q9BYX2 928 aa17.29■□□□□ 0.36
PMS2-204ENST00000406569 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
PMS2-204ENST00000406569 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
PMS2-204ENST00000406569 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
PMS2-204ENST00000406569 TMEM57Q8N5G2 664 aa17.28■□□□□ 0.36
PMS2-204ENST00000406569 RIMS2Q9UQ26 1411 aa17.28■□□□□ 0.36
PMS2-204ENST00000406569 AKAP12Q02952 1782 aa17.28■□□□□ 0.36
PMS2-204ENST00000406569 PTCH1Q13635 1447 aa17.27■□□□□ 0.36
PMS2-204ENST00000406569 AATKQ6ZMQ8 1374 aa17.27■□□□□ 0.36
PMS2-204ENST00000406569 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
PMS2-204ENST00000406569 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
PMS2-204ENST00000406569 ARHGAP45Q92619 1136 aa17.26■□□□□ 0.35
PMS2-204ENST00000406569 PRKAR2BP31323 418 aa17.24■□□□□ 0.35
PMS2-204ENST00000406569 NUCB1Q02818 461 aa17.24■□□□□ 0.35
PMS2-204ENST00000406569 CALD1Q05682 793 aaKnown RBP17.24■□□□□ 0.35
PMS2-204ENST00000406569 TECPR2O15040 1411 aa17.24■□□□□ 0.35
PMS2-204ENST00000406569 C3P01024 1663 aa17.24■□□□□ 0.35
PMS2-204ENST00000406569 ZNF853P0CG23 659 aa17.24■□□□□ 0.35
PMS2-204ENST00000406569 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
PMS2-204ENST00000406569 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
PMS2-204ENST00000406569 C22orf23Q9BZE7 217 aa17.23■□□□□ 0.35
PMS2-204ENST00000406569 CHMP4BQ9H444 224 aaKnown RBP17.23■□□□□ 0.35
PMS2-204ENST00000406569 CPS1P31327 1500 aa17.22■□□□□ 0.35
PMS2-204ENST00000406569 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
PMS2-204ENST00000406569 ITSN1Q15811 1721 aa17.22■□□□□ 0.35
PMS2-204ENST00000406569 VAMP4O75379 141 aa17.21■□□□□ 0.35
PMS2-204ENST00000406569 IL13P35225 146 aa17.21■□□□□ 0.35
PMS2-204ENST00000406569 MRPL50Q8N5N7 158 aaKnown RBP17.21■□□□□ 0.35
PMS2-204ENST00000406569 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
PMS2-204ENST00000406569 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
PMS2-204ENST00000406569 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.35
PMS2-204ENST00000406569 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
PMS2-204ENST00000406569 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
PMS2-204ENST00000406569 GNAI1P63096 354 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms