RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 RRP1P56182 461 aaKnown RBP38.23■■■■□ 3.71
CSNK1E-205ENST00000405675 GOLGA2Q08379 1002 aa38.23■■■■□ 3.71
CSNK1E-205ENST00000405675 NALCNQ8IZF0 1738 aa38.23■■■■□ 3.71
CSNK1E-205ENST00000405675 PLEKHG3A1L390 1219 aa38.23■■■■□ 3.71
CSNK1E-205ENST00000405675 DUSP27Q5VZP5 1158 aa38.21■■■■□ 3.71
CSNK1E-205ENST00000405675 ACEP12821 1306 aa38.2■■■■□ 3.71
CSNK1E-205ENST00000405675 EDC4Q6P2E9 1401 aaKnown RBP38.2■■■■□ 3.71
CSNK1E-205ENST00000405675 COL3A1P02461 1466 aaPredicted RBP38.19■■■■□ 3.7
CSNK1E-205ENST00000405675 NKTRP30414 1462 aaKnown RBP38.19■■■■□ 3.7
CSNK1E-205ENST00000405675 ZNF692Q9BU19 519 aaPredicted RBP38.18■■■■□ 3.7
CSNK1E-205ENST00000405675 RUNDC1Q96C34 613 aa38.18■■■■□ 3.7
CSNK1E-205ENST00000405675 SLFN5Q08AF3 891 aa38.17■■■■□ 3.7
CSNK1E-205ENST00000405675 PROSER2Q86WR7 435 aaPredicted RBP38.17■■■■□ 3.7
CSNK1E-205ENST00000405675 ADGRL3Q9HAR2 1447 aa38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 AKAP12Q02952 1782 aa38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 ITSN1Q15811 1721 aa38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 B4GALNT3Q6L9W6 998 aa38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 PMFBP1Q8TBY8 1022 aa38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 RGPD8O14715 1765 aaPredicted RBP38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 FMN2Q9NZ56 1722 aa38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 STRCQ7RTU9 1775 aa38.16■■■■□ 3.7
CSNK1E-205ENST00000405675 C14orf37Q86TY3 774 aa38.15■■■■□ 3.7
CSNK1E-205ENST00000405675 SPINK5Q9NQ38 1064 aaPredicted RBP38.15■■■■□ 3.7
CSNK1E-205ENST00000405675 MON2Q7Z3U7 1717 aa38.15■■■■□ 3.7
CSNK1E-205ENST00000405675 IQSEC2Q5JU85 1478 aa38.14■■■■□ 3.7
CSNK1E-205ENST00000405675 ANKARQ7Z5J8 1434 aa38.14■■■■□ 3.7
CSNK1E-205ENST00000405675 NGEFQ8N5V2 710 aa38.14■■■■□ 3.7
CSNK1E-205ENST00000405675 DMRT2Q9Y5R5 561 aa38.14■■■■□ 3.7
CSNK1E-205ENST00000405675 NME9Q86XW9 330 aa38.13■■■■□ 3.69
CSNK1E-205ENST00000405675 U2AF1L5P0DN76 240 aaPredicted RBP38.12■■■■□ 3.69
CSNK1E-205ENST00000405675 U2AF1Q01081 240 aaKnown RBP eCLIP38.12■■■■□ 3.69
CSNK1E-205ENST00000405675 TRMT2AQ8IZ69 625 aaKnown RBP38.12■■■■□ 3.69
CSNK1E-205ENST00000405675 FBLN1P23142 703 aa38.11■■■■□ 3.69
CSNK1E-205ENST00000405675 ZRANB1Q9UGI0 708 aa38.11■■■■□ 3.69
CSNK1E-205ENST00000405675 TCP11L2Q8N4U5 519 aa38.1■■■■□ 3.69
CSNK1E-205ENST00000405675 RRP7AQ9Y3A4 280 aaKnown RBP38.09■■■■□ 3.69
CSNK1E-205ENST00000405675 STRCP1A6NGW2 1772 aa38.08■■■■□ 3.69
CSNK1E-205ENST00000405675 PNPLA6Q8IY17 1366 aa38.08■■■■□ 3.69
CSNK1E-205ENST00000405675 WWC1Q8IX03 1113 aa38.08■■■■□ 3.69
CSNK1E-205ENST00000405675 TSHZ2Q9NRE2 1034 aa38.08■■■■□ 3.69
CSNK1E-205ENST00000405675 NGDNQ8NEJ9 315 aaKnown RBP38.06■■■■□ 3.68
CSNK1E-205ENST00000405675 USP6P35125 1406 aa38.06■■■■□ 3.68
CSNK1E-205ENST00000405675 NEUROD2Q15784 382 aa38.05■■■■□ 3.68
CSNK1E-205ENST00000405675 POLKQ9UBT6 870 aa38.05■■■■□ 3.68
CSNK1E-205ENST00000405675 TTC21BQ7Z4L5 1316 aa38.04■■■■□ 3.68
CSNK1E-205ENST00000405675 U2SURPO15042 1029 aaKnown RBP38.03■■■■□ 3.68
CSNK1E-205ENST00000405675 E9PSI1 815 aa38.02■■■■□ 3.68
CSNK1E-205ENST00000405675 NRKQ7Z2Y5 1582 aa38.01■■■■□ 3.68
CSNK1E-205ENST00000405675 PLIN1O60240 522 aa38.01■■■■□ 3.68
CSNK1E-205ENST00000405675 PHF23Q9BUL5 403 aaPredicted RBP38.01■■■■□ 3.68
CSNK1E-205ENST00000405675 DIAPH1O60610 1272 aaKnown RBP37.99■■■■□ 3.67
CSNK1E-205ENST00000405675 TMEM94Q12767 1356 aa37.99■■■■□ 3.67
CSNK1E-205ENST00000405675 SSH2Q76I76 1423 aa37.98■■■■□ 3.67
CSNK1E-205ENST00000405675 EXOC6Q8TAG9 804 aa37.97■■■■□ 3.67
CSNK1E-205ENST00000405675 PLEKHF1Q96S99 279 aa37.97■■■■□ 3.67
CSNK1E-205ENST00000405675 C19orf44Q9H6X5 657 aa37.97■■■■□ 3.67
CSNK1E-205ENST00000405675 PPM1GO15355 546 aaPredicted RBP37.96■■■■□ 3.67
CSNK1E-205ENST00000405675 COG3Q96JB2 828 aa37.96■■■■□ 3.67
CSNK1E-205ENST00000405675 PHF8Q9UPP1 1060 aa37.96■■■■□ 3.67
CSNK1E-205ENST00000405675 EMILIN1Q9Y6C2 1016 aa37.95■■■■□ 3.67
CSNK1E-205ENST00000405675 MAP2P11137 1827 aaKnown RBP37.95■■■■□ 3.67
CSNK1E-205ENST00000405675 ESCO1Q5FWF5 840 aa37.94■■■■□ 3.66
CSNK1E-205ENST00000405675 AATKQ6ZMQ8 1374 aa37.92■■■■□ 3.66
CSNK1E-205ENST00000405675 CCDC27Q2M243 656 aa37.92■■■■□ 3.66
CSNK1E-205ENST00000405675 CCDC136Q96JN2 1154 aa37.9■■■■□ 3.66
CSNK1E-205ENST00000405675 ZNF335Q9H4Z2 1342 aaPredicted RBP37.89■■■■□ 3.66
CSNK1E-205ENST00000405675 NCBP3Q53F19 620 aaKnown RBP37.88■■■■□ 3.66
CSNK1E-205ENST00000405675 TTC21AQ8NDW8 1320 aa37.88■■■■□ 3.65
CSNK1E-205ENST00000405675 ORAI2Q96SN7 254 aa37.88■■■■□ 3.65
CSNK1E-205ENST00000405675 WDR63Q8IWG1 891 aa37.87■■■■□ 3.65
CSNK1E-205ENST00000405675 NCOA3Q9Y6Q9 1424 aa37.87■■■■□ 3.65
CSNK1E-205ENST00000405675 RRS1Q15050 365 aaKnown RBP37.85■■■■□ 3.65
CSNK1E-205ENST00000405675 CDK12Q9NYV4 1490 aaPredicted RBP37.85■■■■□ 3.65
CSNK1E-205ENST00000405675 C20orf194Q5TEA3 1177 aa37.84■■■■□ 3.65
CSNK1E-205ENST00000405675 OVOS2A0A0J9YW53 1432 aa37.84■■■■□ 3.65
CSNK1E-205ENST00000405675 OVOS2Q6IE36 1432 aa37.84■■■■□ 3.65
CSNK1E-205ENST00000405675 ATF3P18847 181 aa37.83■■■■□ 3.65
CSNK1E-205ENST00000405675 TMPOP42166 694 aaKnown RBP37.82■■■■□ 3.64
CSNK1E-205ENST00000405675 CRBNQ96SW2 442 aa37.81■■■■□ 3.64
CSNK1E-205ENST00000405675 MAPK8IP3Q9UPT6 1336 aa37.81■■■■□ 3.64
CSNK1E-205ENST00000405675 C1orf167Q5SNV9 1468 aa37.8■■■■□ 3.64
CSNK1E-205ENST00000405675 IL13P35225 146 aa37.79■■■■□ 3.64
CSNK1E-205ENST00000405675 LRRC7Q96NW7 1537 aa37.79■■■■□ 3.64
CSNK1E-205ENST00000405675 PAK3O75914 559 aaPredicted RBP37.78■■■■□ 3.64
CSNK1E-205ENST00000405675 FCHSD2O94868 740 aa37.78■■■■□ 3.64
CSNK1E-205ENST00000405675 RSPH6AQ9H0K4 717 aa37.78■■■■□ 3.64
CSNK1E-205ENST00000405675 PSME1Q06323 249 aa37.77■■■■□ 3.64
CSNK1E-205ENST00000405675 TRIM35Q9UPQ4 493 aa37.77■■■■□ 3.64
CSNK1E-205ENST00000405675 DCCP43146 1447 aa37.77■■■■□ 3.64
CSNK1E-205ENST00000405675 FOXO3O43524 673 aa37.76■■■■□ 3.63
CSNK1E-205ENST00000405675 BCAR3O75815 825 aa37.76■■■■□ 3.63
CSNK1E-205ENST00000405675 PIK3C2AO00443 1686 aa37.75■■■■□ 3.63
CSNK1E-205ENST00000405675 XIRP1Q702N8 1843 aaKnown RBP37.75■■■■□ 3.63
CSNK1E-205ENST00000405675 MST1RQ04912 1400 aa37.75■■■■□ 3.63
CSNK1E-205ENST00000405675 MSH6P52701 1360 aa37.74■■■■□ 3.63
CSNK1E-205ENST00000405675 PNNQ9H307 717 aaKnown RBP37.74■■■■□ 3.63
CSNK1E-205ENST00000405675 USP31Q70CQ4 1352 aa37.74■■■■□ 3.63
CSNK1E-205ENST00000405675 PRKAR2BP31323 418 aa37.73■■■■□ 3.63
CSNK1E-205ENST00000405675 NUTM2GQ5VZR2 741 aa37.73■■■■□ 3.63
CSNK1E-205ENST00000405675 CADPS2Q86UW7 1296 aa37.73■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms