RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 RGS17Q9UGC6 210 aaPredicted RBP30.08■■■□□ 2.41
EPCAM-202ENST00000405271 KTN1Q86UP2 1357 aaKnown RBP30.08■■■□□ 2.41
EPCAM-202ENST00000405271 EDC4Q6P2E9 1401 aaKnown RBP30.08■■■□□ 2.41
EPCAM-202ENST00000405271 FOXO3O43524 673 aa30.06■■■□□ 2.4
EPCAM-202ENST00000405271 ZNF692Q9BU19 519 aaPredicted RBP30.06■■■□□ 2.4
EPCAM-202ENST00000405271 CARD14Q9BXL6 1004 aa30.06■■■□□ 2.4
EPCAM-202ENST00000405271 USP6P35125 1406 aa30.06■■■□□ 2.4
EPCAM-202ENST00000405271 ACEP12821 1306 aa30.06■■■□□ 2.4
EPCAM-202ENST00000405271 ANP32CO43423 234 aa30.05■■■□□ 2.4
EPCAM-202ENST00000405271 NPHP3Q7Z494 1330 aa30.04■■■□□ 2.4
EPCAM-202ENST00000405271 PHF8Q9UPP1 1060 aa30.04■■■□□ 2.4
EPCAM-202ENST00000405271 TRPM3Q9HCF6 1732 aaPredicted RBP30.04■■■□□ 2.4
EPCAM-202ENST00000405271 USP54Q70EL1 1684 aa30.04■■■□□ 2.4
EPCAM-202ENST00000405271 NSD2O96028 1365 aa30.03■■■□□ 2.4
EPCAM-202ENST00000405271 CGNL1Q0VF96 1302 aa30.01■■■□□ 2.39
EPCAM-202ENST00000405271 PMFBP1Q8TBY8 1022 aa30.01■■■□□ 2.39
EPCAM-202ENST00000405271 BRD4O60885 1362 aaPredicted RBP30■■■□□ 2.39
EPCAM-202ENST00000405271 SHPRHQ149N8 1683 aa30■■■□□ 2.39
EPCAM-202ENST00000405271 NUTM2BA6NNL0 878 aaPredicted RBP30■■■□□ 2.39
EPCAM-202ENST00000405271 NUTM2EB1AL46 878 aaPredicted RBP30■■■□□ 2.39
EPCAM-202ENST00000405271 AMER1Q5JTC6 1135 aaPredicted RBP30■■■□□ 2.39
EPCAM-202ENST00000405271 NUTM2AQ8IVF1 878 aaPredicted RBP30■■■□□ 2.39
EPCAM-202ENST00000405271 NGDNQ8NEJ9 315 aaKnown RBP30■■■□□ 2.39
EPCAM-202ENST00000405271 PNPLA6Q8IY17 1366 aa29.99■■■□□ 2.39
EPCAM-202ENST00000405271 LRP6O75581 1613 aa29.99■■■□□ 2.39
EPCAM-202ENST00000405271 XPCQ01831 940 aaPredicted RBP29.99■■■□□ 2.39
EPCAM-202ENST00000405271 PIK3C2AO00443 1686 aa29.99■■■□□ 2.39
EPCAM-202ENST00000405271 SSH2Q76I76 1423 aa29.98■■■□□ 2.39
EPCAM-202ENST00000405271 MARF1Q9Y4F3 1742 aaKnown RBP29.97■■■□□ 2.39
EPCAM-202ENST00000405271 PRKRIP1Q9H875 184 aaPredicted RBP29.96■■■□□ 2.39
EPCAM-202ENST00000405271 PARD3Q8TEW0 1356 aa29.96■■■□□ 2.39
EPCAM-202ENST00000405271 MEX3CQ5U5Q3 659 aaKnown RBP29.96■■■□□ 2.39
EPCAM-202ENST00000405271 ALS2Q96Q42 1657 aa29.94■■■□□ 2.38
EPCAM-202ENST00000405271 PXDNQ92626 1479 aa29.94■■■□□ 2.38
EPCAM-202ENST00000405271 RALBP1Q15311 655 aa29.92■■■□□ 2.38
EPCAM-202ENST00000405271 TTC21AQ8NDW8 1320 aa29.92■■■□□ 2.38
EPCAM-202ENST00000405271 CC2D1BQ5T0F9 858 aaKnown RBP29.91■■■□□ 2.38
EPCAM-202ENST00000405271 POTEAQ6S8J7 498 aa29.91■■■□□ 2.38
EPCAM-202ENST00000405271 KRT28Q7Z3Y7 464 aa29.91■■■□□ 2.38
EPCAM-202ENST00000405271 MIER1Q8N108 512 aa29.91■■■□□ 2.38
EPCAM-202ENST00000405271 SOCS7O14512 581 aa29.9■■■□□ 2.38
EPCAM-202ENST00000405271 TTC21BQ7Z4L5 1316 aa29.9■■■□□ 2.38
EPCAM-202ENST00000405271 MAP2P11137 1827 aaKnown RBP29.89■■■□□ 2.38
EPCAM-202ENST00000405271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.86■■■□□ 2.37
EPCAM-202ENST00000405271 FYB1O15117 783 aa29.86■■■□□ 2.37
EPCAM-202ENST00000405271 PSME1Q06323 249 aa29.86■■■□□ 2.37
EPCAM-202ENST00000405271 SPATA31A3Q5VYP0 1347 aa29.85■■■□□ 2.37
EPCAM-202ENST00000405271 OVOS2A0A0J9YW53 1432 aa29.84■■■□□ 2.37
EPCAM-202ENST00000405271 OVOS2Q6IE36 1432 aa29.84■■■□□ 2.37
EPCAM-202ENST00000405271 CNGB1Q14028 1251 aaPredicted RBP29.84■■■□□ 2.37
EPCAM-202ENST00000405271 MYBBP1AQ9BQG0 1328 aaKnown RBP29.83■■■□□ 2.37
EPCAM-202ENST00000405271 ADAMTS2O95450 1211 aa29.83■■■□□ 2.37
EPCAM-202ENST00000405271 ZNF772Q68DY9 489 aaPredicted RBP29.81■■■□□ 2.36
EPCAM-202ENST00000405271 C8orf37Q96NL8 207 aa29.81■■■□□ 2.36
EPCAM-202ENST00000405271 USP31Q70CQ4 1352 aa29.81■■■□□ 2.36
EPCAM-202ENST00000405271 NME9Q86XW9 330 aa29.81■■■□□ 2.36
EPCAM-202ENST00000405271 GGNBP2Q9H3C7 697 aa29.81■■■□□ 2.36
EPCAM-202ENST00000405271 CRYBG1Q9Y4K1 1723 aa29.8■■■□□ 2.36
EPCAM-202ENST00000405271 SBNO1A3KN83 1393 aa29.8■■■□□ 2.36
EPCAM-202ENST00000405271 CCER2I3L3R5 266 aa29.79■■■□□ 2.36
EPCAM-202ENST00000405271 MORC1Q86VD1 984 aa29.79■■■□□ 2.36
EPCAM-202ENST00000405271 AFF2P51816 1311 aa29.78■■■□□ 2.36
EPCAM-202ENST00000405271 PHRF1Q9P1Y6 1649 aaKnown RBP29.77■■■□□ 2.36
EPCAM-202ENST00000405271 TNS3Q68CZ2 1445 aa29.77■■■□□ 2.36
EPCAM-202ENST00000405271 NGLY1Q96IV0 654 aa29.76■■■□□ 2.36
EPCAM-202ENST00000405271 LTN1O94822 1766 aa29.76■■■□□ 2.36
EPCAM-202ENST00000405271 COG3Q96JB2 828 aa29.76■■■□□ 2.35
EPCAM-202ENST00000405271 COL22A1Q8NFW1 1626 aaPredicted RBP29.75■■■□□ 2.35
EPCAM-202ENST00000405271 PAK3O75914 559 aaPredicted RBP29.75■■■□□ 2.35
EPCAM-202ENST00000405271 ABCA3Q99758 1704 aa29.74■■■□□ 2.35
EPCAM-202ENST00000405271 LMOD2Q6P5Q4 547 aa29.73■■■□□ 2.35
EPCAM-202ENST00000405271 NLRP13Q86W25 1043 aa29.72■■■□□ 2.35
EPCAM-202ENST00000405271 SLIT3O75094 1523 aa29.72■■■□□ 2.35
EPCAM-202ENST00000405271 PPP2R1AP30153 589 aa29.71■■■□□ 2.35
EPCAM-202ENST00000405271 ABTB2Q8N961 1025 aa29.71■■■□□ 2.35
EPCAM-202ENST00000405271 AATKQ6ZMQ8 1374 aa29.7■■■□□ 2.35
EPCAM-202ENST00000405271 ZRANB1Q9UGI0 708 aa29.7■■■□□ 2.34
EPCAM-202ENST00000405271 CABLES1Q8TDN4 633 aa29.69■■■□□ 2.34
EPCAM-202ENST00000405271 ARHGEF10O15013 1369 aa29.68■■■□□ 2.34
EPCAM-202ENST00000405271 FNBP4Q8N3X1 1017 aaPredicted RBP29.68■■■□□ 2.34
EPCAM-202ENST00000405271 SMG6Q86US8 1419 aaKnown RBP29.68■■■□□ 2.34
EPCAM-202ENST00000405271 PLEKHG5O94827 1062 aa29.66■■■□□ 2.34
EPCAM-202ENST00000405271 NLRP6P59044 892 aa29.66■■■□□ 2.34
EPCAM-202ENST00000405271 QTRT2Q9H974 415 aaKnown RBP29.66■■■□□ 2.34
EPCAM-202ENST00000405271 NFAT5O94916 1531 aa29.66■■■□□ 2.34
EPCAM-202ENST00000405271 RXRBP28702 533 aa29.65■■■□□ 2.34
EPCAM-202ENST00000405271 USP21Q9UK80 565 aa29.65■■■□□ 2.34
EPCAM-202ENST00000405271 TNNT2P45379 298 aaPredicted RBP29.64■■■□□ 2.34
EPCAM-202ENST00000405271 PEAK1Q9H792 1746 aa29.63■■■□□ 2.33
EPCAM-202ENST00000405271 USP19O94966 1318 aa29.62■■■□□ 2.33
EPCAM-202ENST00000405271 HAP1P54257 671 aaPredicted RBP29.62■■■□□ 2.33
EPCAM-202ENST00000405271 CDK12Q9NYV4 1490 aaPredicted RBP29.62■■■□□ 2.33
EPCAM-202ENST00000405271 MRS2Q9HD23 443 aa29.61■■■□□ 2.33
EPCAM-202ENST00000405271 NUTM2GQ5VZR2 741 aa29.6■■■□□ 2.33
EPCAM-202ENST00000405271 CCDC184Q52MB2 194 aa29.57■■■□□ 2.32
EPCAM-202ENST00000405271 RBM6P78332 1123 aaKnown RBP29.56■■■□□ 2.32
EPCAM-202ENST00000405271 KCNH5Q8NCM2 988 aa29.56■■■□□ 2.32
EPCAM-202ENST00000405271 COL3A1P02461 1466 aaPredicted RBP29.56■■■□□ 2.32
EPCAM-202ENST00000405271 BCL9LQ86UU0 1499 aa29.56■■■□□ 2.32
EPCAM-202ENST00000405271 TRPC5Q9UL62 973 aaPredicted RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms