RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 PLIN1O60240 522 aa12.11□□□□□ -0.47
CBX1-203ENST00000402583 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
CBX1-203ENST00000402583 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
CBX1-203ENST00000402583 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
CBX1-203ENST00000402583 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
CBX1-203ENST00000402583 WWC1Q8IX03 1113 aa12.1□□□□□ -0.47
CBX1-203ENST00000402583 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
CBX1-203ENST00000402583 ATP7BP35670 1465 aa12.09□□□□□ -0.47
CBX1-203ENST00000402583 TNRQ92752 1358 aa12.09□□□□□ -0.47
CBX1-203ENST00000402583 TCP11L2Q8N4U5 519 aa12.09□□□□□ -0.47
CBX1-203ENST00000402583 U2AF1L5P0DN76 240 aaPredicted RBP12.08□□□□□ -0.48
CBX1-203ENST00000402583 ANP32AP39687 249 aaKnown RBP12.08□□□□□ -0.48
CBX1-203ENST00000402583 U2AF1Q01081 240 aaKnown RBP eCLIP12.08□□□□□ -0.48
CBX1-203ENST00000402583 CENPQQ7L2Z9 268 aaPredicted RBP12.08□□□□□ -0.48
CBX1-203ENST00000402583 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
CBX1-203ENST00000402583 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
CBX1-203ENST00000402583 AAMPQ13685 434 aa12.07□□□□□ -0.48
CBX1-203ENST00000402583 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
CBX1-203ENST00000402583 FAM135BQ49AJ0 1406 aa12.07□□□□□ -0.48
CBX1-203ENST00000402583 CD163L1Q9NR16 1453 aa12.07□□□□□ -0.48
CBX1-203ENST00000402583 ANKRD26Q9UPS8 1709 aa12.06□□□□□ -0.48
CBX1-203ENST00000402583 FYB1O15117 783 aa12.06□□□□□ -0.48
CBX1-203ENST00000402583 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
CBX1-203ENST00000402583 GGNBP2Q9H3C7 697 aa12.06□□□□□ -0.48
CBX1-203ENST00000402583 CABP1Q9NZU7 370 aa12.06□□□□□ -0.48
CBX1-203ENST00000402583 MAPK8IP3Q9UPT6 1336 aa12.06□□□□□ -0.48
CBX1-203ENST00000402583 TECPR2O15040 1411 aa12.05□□□□□ -0.48
CBX1-203ENST00000402583 CT47B1P0C2W7 299 aaPredicted RBP12.05□□□□□ -0.48
CBX1-203ENST00000402583 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
CBX1-203ENST00000402583 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
CBX1-203ENST00000402583 SETD1AO15047 1707 aaKnown RBP12.04□□□□□ -0.48
CBX1-203ENST00000402583 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
CBX1-203ENST00000402583 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
CBX1-203ENST00000402583 ADGRB2O60241 1585 aa12.04□□□□□ -0.48
CBX1-203ENST00000402583 COL3A1P02461 1466 aaPredicted RBP12.03□□□□□ -0.48
CBX1-203ENST00000402583 U2SURPO15042 1029 aaKnown RBP12.03□□□□□ -0.48
CBX1-203ENST00000402583 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
CBX1-203ENST00000402583 NEFMP07197 916 aa12.03□□□□□ -0.48
CBX1-203ENST00000402583 TMEM2Q9UHN6 1383 aa12.03□□□□□ -0.48
CBX1-203ENST00000402583 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
CBX1-203ENST00000402583 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
CBX1-203ENST00000402583 WAPLQ7Z5K2 1190 aa12.02□□□□□ -0.49
CBX1-203ENST00000402583 RRP7AQ9Y3A4 280 aaKnown RBP12.02□□□□□ -0.49
CBX1-203ENST00000402583 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
CBX1-203ENST00000402583 PNPLA6Q8IY17 1366 aa12.02□□□□□ -0.49
CBX1-203ENST00000402583 CPS1P31327 1500 aa12.01□□□□□ -0.49
CBX1-203ENST00000402583 NRXN3Q9Y4C0 1643 aa12.01□□□□□ -0.49
CBX1-203ENST00000402583 BCAR3O75815 825 aa12.01□□□□□ -0.49
CBX1-203ENST00000402583 KIF20BQ96Q89 1820 aa12.01□□□□□ -0.49
CBX1-203ENST00000402583 IL16Q14005 1332 aa12.01□□□□□ -0.49
CBX1-203ENST00000402583 PPIP5K1Q6PFW1 1433 aa12.01□□□□□ -0.49
CBX1-203ENST00000402583 PDE4AP27815 886 aa12□□□□□ -0.49
CBX1-203ENST00000402583 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
CBX1-203ENST00000402583 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
CBX1-203ENST00000402583 METP08581 1390 aa12□□□□□ -0.49
CBX1-203ENST00000402583 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
CBX1-203ENST00000402583 CDC42BPGQ6DT37 1551 aa12□□□□□ -0.49
CBX1-203ENST00000402583 FCHSD2O94868 740 aa11.99□□□□□ -0.49
CBX1-203ENST00000402583 RARSP54136 660 aaKnown RBP11.99□□□□□ -0.49
CBX1-203ENST00000402583 IPO9Q96P70 1041 aaKnown RBP11.99□□□□□ -0.49
CBX1-203ENST00000402583 PLEKHF1Q96S99 279 aa11.99□□□□□ -0.49
CBX1-203ENST00000402583 BACH2Q9BYV9 841 aa11.99□□□□□ -0.49
CBX1-203ENST00000402583 CCDC61Q9Y6R9 512 aa11.99□□□□□ -0.49
CBX1-203ENST00000402583 CPSF1Q10570 1443 aaKnown RBP11.99□□□□□ -0.49
CBX1-203ENST00000402583 UBR1Q8IWV7 1749 aa11.98□□□□□ -0.49
CBX1-203ENST00000402583 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
CBX1-203ENST00000402583 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
CBX1-203ENST00000402583 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
CBX1-203ENST00000402583 NOP58Q9Y2X3 529 aaKnown RBP11.98□□□□□ -0.49
CBX1-203ENST00000402583 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
CBX1-203ENST00000402583 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
CBX1-203ENST00000402583 CALD1Q05682 793 aaKnown RBP11.97□□□□□ -0.49
CBX1-203ENST00000402583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.49
CBX1-203ENST00000402583 COG3Q96JB2 828 aa11.97□□□□□ -0.49
CBX1-203ENST00000402583 PMFBP1Q8TBY8 1022 aa11.96□□□□□ -0.49
CBX1-203ENST00000402583 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
CBX1-203ENST00000402583 CLUAP1Q96AJ1 413 aa11.96□□□□□ -0.49
CBX1-203ENST00000402583 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.49
CBX1-203ENST00000402583 RIPK4P57078 832 aa11.95□□□□□ -0.5
CBX1-203ENST00000402583 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
CBX1-203ENST00000402583 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
CBX1-203ENST00000402583 ZBTB47Q9UFB7 747 aaPredicted RBP11.95□□□□□ -0.5
CBX1-203ENST00000402583 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
CBX1-203ENST00000402583 ADAMTS13Q76LX8 1427 aa11.94□□□□□ -0.5
CBX1-203ENST00000402583 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
CBX1-203ENST00000402583 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
CBX1-203ENST00000402583 DDRGK1Q96HY6 314 aa11.93□□□□□ -0.5
CBX1-203ENST00000402583 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
CBX1-203ENST00000402583 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
CBX1-203ENST00000402583 SLIT1O75093 1534 aa11.92□□□□□ -0.5
CBX1-203ENST00000402583 PPM1GO15355 546 aaPredicted RBP11.92□□□□□ -0.5
CBX1-203ENST00000402583 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
CBX1-203ENST00000402583 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
CBX1-203ENST00000402583 FTSJ3Q8IY81 847 aaKnown RBP11.92□□□□□ -0.5
CBX1-203ENST00000402583 THEMISQ8N1K5 641 aaPredicted RBP11.92□□□□□ -0.5
CBX1-203ENST00000402583 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
CBX1-203ENST00000402583 ZNF428Q96B54 188 aa11.92□□□□□ -0.5
CBX1-203ENST00000402583 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
CBX1-203ENST00000402583 DIP2AQ14689 1571 aa11.92□□□□□ -0.5
CBX1-203ENST00000402583 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms