RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 FKBP8Q14318 412 aa11.45□□□□□ -0.58
LINC02449-202ENST00000399866 NME9Q86XW9 330 aa11.45□□□□□ -0.58
LINC02449-202ENST00000399866 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
LINC02449-202ENST00000399866 RGPD8O14715 1765 aaPredicted RBP11.44□□□□□ -0.58
LINC02449-202ENST00000399866 CCDC146Q8IYE0 955 aa11.44□□□□□ -0.58
LINC02449-202ENST00000399866 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
LINC02449-202ENST00000399866 OVOS2A0A0J9YW53 1432 aa11.43□□□□□ -0.58
LINC02449-202ENST00000399866 OVOS2Q6IE36 1432 aa11.43□□□□□ -0.58
LINC02449-202ENST00000399866 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
LINC02449-202ENST00000399866 AATKQ6ZMQ8 1374 aa11.43□□□□□ -0.58
LINC02449-202ENST00000399866 PNPLA6Q8IY17 1366 aa11.43□□□□□ -0.58
LINC02449-202ENST00000399866 TTC21BQ7Z4L5 1316 aa11.42□□□□□ -0.58
LINC02449-202ENST00000399866 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
LINC02449-202ENST00000399866 COG3Q96JB2 828 aa11.42□□□□□ -0.58
LINC02449-202ENST00000399866 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
LINC02449-202ENST00000399866 PIK3C2AO00443 1686 aa11.41□□□□□ -0.58
LINC02449-202ENST00000399866 USP54Q70EL1 1684 aa11.41□□□□□ -0.58
LINC02449-202ENST00000399866 APAF1O14727 1248 aa11.41□□□□□ -0.58
LINC02449-202ENST00000399866 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
LINC02449-202ENST00000399866 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
LINC02449-202ENST00000399866 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
LINC02449-202ENST00000399866 RUNDC1Q96C34 613 aa11.4□□□□□ -0.58
LINC02449-202ENST00000399866 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.58
LINC02449-202ENST00000399866 POLKQ9UBT6 870 aa11.4□□□□□ -0.58
LINC02449-202ENST00000399866 LRRC7Q96NW7 1537 aa11.4□□□□□ -0.59
LINC02449-202ENST00000399866 RNF123Q5XPI4 1314 aa11.39□□□□□ -0.59
LINC02449-202ENST00000399866 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
LINC02449-202ENST00000399866 PMFBP1Q8TBY8 1022 aa11.39□□□□□ -0.59
LINC02449-202ENST00000399866 MAP2P11137 1827 aaKnown RBP11.39□□□□□ -0.59
LINC02449-202ENST00000399866 MARF1Q9Y4F3 1742 aaKnown RBP11.38□□□□□ -0.59
LINC02449-202ENST00000399866 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
LINC02449-202ENST00000399866 U2AF1L5P0DN76 240 aaPredicted RBP11.38□□□□□ -0.59
LINC02449-202ENST00000399866 U2AF1Q01081 240 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC02449-202ENST00000399866 NGDNQ8NEJ9 315 aaKnown RBP11.38□□□□□ -0.59
LINC02449-202ENST00000399866 STRCP1A6NGW2 1772 aa11.38□□□□□ -0.59
LINC02449-202ENST00000399866 USP31Q70CQ4 1352 aa11.38□□□□□ -0.59
LINC02449-202ENST00000399866 U2SURPO15042 1029 aaKnown RBP11.37□□□□□ -0.59
LINC02449-202ENST00000399866 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
LINC02449-202ENST00000399866 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
LINC02449-202ENST00000399866 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
LINC02449-202ENST00000399866 EMILIN1Q9Y6C2 1016 aa11.37□□□□□ -0.59
LINC02449-202ENST00000399866 PEAK1Q9H792 1746 aa11.37□□□□□ -0.59
LINC02449-202ENST00000399866 FBLN1P23142 703 aa11.36□□□□□ -0.59
LINC02449-202ENST00000399866 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
LINC02449-202ENST00000399866 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
LINC02449-202ENST00000399866 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
LINC02449-202ENST00000399866 HSPA2P54652 639 aa11.35□□□□□ -0.59
LINC02449-202ENST00000399866 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
LINC02449-202ENST00000399866 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
LINC02449-202ENST00000399866 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
LINC02449-202ENST00000399866 TCP11L2Q8N4U5 519 aa11.35□□□□□ -0.59
LINC02449-202ENST00000399866 RCAN3Q9UKA8 241 aa11.35□□□□□ -0.59
LINC02449-202ENST00000399866 STRCQ7RTU9 1775 aa11.35□□□□□ -0.59
LINC02449-202ENST00000399866 SLFN5Q08AF3 891 aa11.34□□□□□ -0.59
LINC02449-202ENST00000399866 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
LINC02449-202ENST00000399866 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
LINC02449-202ENST00000399866 DUSP27Q5VZP5 1158 aa11.34□□□□□ -0.59
LINC02449-202ENST00000399866 PLEKHF1Q96S99 279 aa11.34□□□□□ -0.59
LINC02449-202ENST00000399866 PHF23Q9BUL5 403 aaPredicted RBP11.34□□□□□ -0.59
LINC02449-202ENST00000399866 DCCP43146 1447 aa11.34□□□□□ -0.59
LINC02449-202ENST00000399866 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
LINC02449-202ENST00000399866 IL13P35225 146 aa11.33□□□□□ -0.6
LINC02449-202ENST00000399866 CCDC27Q2M243 656 aa11.33□□□□□ -0.6
LINC02449-202ENST00000399866 WWC1Q8IX03 1113 aa11.33□□□□□ -0.6
LINC02449-202ENST00000399866 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
LINC02449-202ENST00000399866 RRP7AQ9Y3A4 280 aaKnown RBP11.33□□□□□ -0.6
LINC02449-202ENST00000399866 MAPK8IP3Q9UPT6 1336 aa11.33□□□□□ -0.6
LINC02449-202ENST00000399866 RGPD1P0DJD0 1748 aa11.32□□□□□ -0.6
LINC02449-202ENST00000399866 E9PSI1 815 aa11.32□□□□□ -0.6
LINC02449-202ENST00000399866 RRP1P56182 461 aaKnown RBP11.32□□□□□ -0.6
LINC02449-202ENST00000399866 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
LINC02449-202ENST00000399866 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
LINC02449-202ENST00000399866 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
LINC02449-202ENST00000399866 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
LINC02449-202ENST00000399866 TMEM94Q12767 1356 aa11.31□□□□□ -0.6
LINC02449-202ENST00000399866 FCHSD2O94868 740 aa11.31□□□□□ -0.6
LINC02449-202ENST00000399866 NEUROD2Q15784 382 aa11.31□□□□□ -0.6
LINC02449-202ENST00000399866 ESCO1Q5FWF5 840 aa11.31□□□□□ -0.6
LINC02449-202ENST00000399866 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
LINC02449-202ENST00000399866 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
LINC02449-202ENST00000399866 SBNO1A3KN83 1393 aa11.3□□□□□ -0.6
LINC02449-202ENST00000399866 MST1RQ04912 1400 aa11.3□□□□□ -0.6
LINC02449-202ENST00000399866 NFAT5O94916 1531 aa11.3□□□□□ -0.6
LINC02449-202ENST00000399866 FLT4P35916 1363 aa11.29□□□□□ -0.6
LINC02449-202ENST00000399866 PRKAR2BP31323 418 aa11.29□□□□□ -0.6
LINC02449-202ENST00000399866 TMPOP42166 694 aaKnown RBP11.29□□□□□ -0.6
LINC02449-202ENST00000399866 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
LINC02449-202ENST00000399866 C19orf44Q9H6X5 657 aa11.29□□□□□ -0.6
LINC02449-202ENST00000399866 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
LINC02449-202ENST00000399866 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
LINC02449-202ENST00000399866 MAP3K19Q56UN5 1328 aa11.29□□□□□ -0.6
LINC02449-202ENST00000399866 SOX12O15370 315 aa11.28□□□□□ -0.6
LINC02449-202ENST00000399866 PAK3O75914 559 aaPredicted RBP11.28□□□□□ -0.6
LINC02449-202ENST00000399866 NLRP6P59044 892 aa11.28□□□□□ -0.6
LINC02449-202ENST00000399866 EIF4A2Q14240 407 aaKnown RBP11.28□□□□□ -0.6
LINC02449-202ENST00000399866 ORAI2Q96SN7 254 aa11.28□□□□□ -0.6
LINC02449-202ENST00000399866 SLIT3O75094 1523 aa11.28□□□□□ -0.6
LINC02449-202ENST00000399866 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
LINC02449-202ENST00000399866 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
LINC02449-202ENST00000399866 HMOX1P09601 288 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms