RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TTC36A6NLP5 189 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 CCDC102AQ96A19 550 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 MCM6Q14566 821 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 CCDC148Q8NFR7 591 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 SMARCC1Q92922 1105 aaPredicted RBP10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 HSPA4P34932 840 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 AEBP1Q8IUX7 1158 aa10.13□□□□□ -0.79
CACNA1C-220ENST00000399655 GTF2A1P52655 376 aaPredicted RBP10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 CBFA2T2O43439 604 aa10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 FBF1Q8TES7 1133 aa10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 MNAT1P51948 309 aa10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 ROCK1Q13464 1354 aa10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 FSD2A1L4K1 749 aa10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 LIG1P18858 919 aa10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 MBD3O95983 291 aa10.12□□□□□ -0.79
CACNA1C-220ENST00000399655 GOLIM4O00461 696 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 MAP3K9P80192 1104 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 LRRFIP2Q9Y608 721 aaKnown RBP10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 NFXL1Q6ZNB6 911 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 MRE11P49959 708 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 FLIIQ13045 1269 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 NSRP1Q9H0G5 558 aaKnown RBP10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 JMYQ8N9B5 988 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 SMC2O95347 1197 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 TAF4BQ92750 862 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 TRIM5Q9C035 493 aa10.11□□□□□ -0.79
CACNA1C-220ENST00000399655 PDCP20941 246 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 PRR16Q569H4 304 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 KIF4BQ2VIQ3 1234 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 RFC1P35251 1148 aaPredicted RBP10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 RNF8O76064 485 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 TDO2P48775 406 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 IFFO1Q0D2I5 559 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 TPD52P55327 224 aaPredicted RBP10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 FMNL2Q96PY5 1086 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 PRPF40AO75400 957 aaKnown RBP10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 CALCOCO2Q13137 446 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 PSMD1Q99460 953 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 GSTTP1A0A1W2PQM5 241 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 POTEB2H3BUK9 544 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 SDF4Q9BRK5 362 aa10.1□□□□□ -0.79
CACNA1C-220ENST00000399655 AIMP1Q12904 312 aaKnown RBP10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 CBX1P83916 185 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 CASQ2O14958 399 aaPredicted RBP10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 MIER1Q8N108 512 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 IVLP07476 585 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 VPS36Q86VN1 386 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 GOLGA4Q13439 2230 aaKnown RBP10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 SART3Q15020 963 aaKnown RBP10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 MAP7D1Q3KQU3 841 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 CCDC14Q49A88 953 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 MRVI1Q9Y6F6 885 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 IKBKGQ9Y6K9 419 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
CACNA1C-220ENST00000399655 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 RAD21O60216 631 aa10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 VPS37DQ86XT2 251 aa10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 MYH10P35580 1976 aa10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 RSRC1Q96IZ7 334 aaKnown RBP10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 UBE4AQ14139 1066 aa10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 RAB3IPQ96QF0 476 aaPredicted RBP10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 STIM2Q9P246 746 aa10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 VCX3BQ9H321 246 aa10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 PPP1R1BQ9UD71 204 aaPredicted RBP10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 RBM25P49756 843 aaKnown RBP10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 MTUS2Q5JR59 1369 aa10.08□□□□□ -0.8
CACNA1C-220ENST00000399655 KIF4AO95239 1232 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 PIBF1Q8WXW3 757 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 ERICH4A6NGS2 130 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 LUC7L2Q9Y383 392 aaKnown RBP10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 NAA15Q9BXJ9 866 aaKnown RBP10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 DCAF8L1A6NGE4 600 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 KIF5BP33176 963 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 SATB1Q01826 763 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 KLHL10Q6JEL2 608 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 LIMCH1Q9UPQ0 1083 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 CCDC172P0C7W6 258 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 STMN2Q93045 179 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 TTC14Q96N46 770 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 ZNF330Q9Y3S2 320 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 CAPZA3Q96KX2 299 aa10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 KRT18P05783 430 aaKnown RBP10.07□□□□□ -0.8
CACNA1C-220ENST00000399655 CCDC50Q8IVM0 306 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 RAI14Q9P0K7 980 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 MVPQ14764 893 aaKnown RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 RALYLQ86SE5 291 aaKnown RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 PPP1R14CQ8TAE6 165 aa10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 TTC12Q9H892 705 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 DNAJC8O75937 253 aaPredicted RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
CACNA1C-220ENST00000399655 MSL1Q68DK7 614 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms